BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017139
         (1087 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626533.1| Exosome complex exonuclease RRP41 [Medicago ...   409   e-112
ref|XP_002280302.1| PREDICTED: exosome complex component RRP41 [...   408   e-111
ref|XP_003549686.1| PREDICTED: exosome complex component RRP41-l...   407   e-111
ref|XP_002530509.1| Exosome complex exonuclease RRP41, putative ...   406   e-111
ref|XP_003554748.1| PREDICTED: exosome complex component RRP41-l...   405   e-110

>ref|XP_003626533.1| Exosome complex exonuclease RRP41 [Medicago truncatula]
           gi|355501548|gb|AES82751.1| Exosome complex exonuclease
           RRP41 [Medicago truncatula]
          Length = 241

 Score =  409 bits (1050), Expect = e-112
 Identities = 205/240 (85%), Positives = 222/240 (92%)
 Frame = +2

Query: 140 MEYVTPEGFRLDGRRPMEMRQLRAEIGVVSRADGSAVFEMGNTKVIAAVYGPREVKNRSE 319
           MEYV+PEG R DGRRPMEMRQ+RAEIG VS+ADGSA+FEMGNTKVIAAVYGPREV+NRS+
Sbjct: 1   MEYVSPEGLRSDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRSQ 60

Query: 320 QLNDQALVRCEYSMANFSTXXXXXXXXXXXXSTEISLVIRQTMEACILTHLMPRSQIDIF 499
           Q++D+ALVRCEYSMANFST            STEISLVIRQTME CILTHLMPRSQIDI+
Sbjct: 61  QMSDKALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIY 120

Query: 500 VQVLQADGGTRSACINAATLALADAGIPMSDLVTSCSAGYLNNTPLLDLNYVEDSAGGPD 679
           VQVLQADGGTRSACINAATLALADAGIPM DLVTSCSAGYLN+TPLLDLNYVEDSAGGPD
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMLDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 680 VTVGILPKLDKVTLLQMDAKLPMNILENVMQLATEGCKAVANYIREVLLNNTKQLEFRRG 859
           VTVGILPKLDKVTLLQMD+KLP++ILENVMQLATEGCKA+ANYIRE+LL NTKQLE+RRG
Sbjct: 181 VTVGILPKLDKVTLLQMDSKLPIDILENVMQLATEGCKAIANYIREILLENTKQLEYRRG 240


>ref|XP_002280302.1| PREDICTED: exosome complex component RRP41 [Vitis vinifera]
           gi|147867252|emb|CAN81194.1| hypothetical protein
           VITISV_022853 [Vitis vinifera]
           gi|297745390|emb|CBI40470.3| unnamed protein product
           [Vitis vinifera]
          Length = 241

 Score =  408 bits (1049), Expect = e-111
 Identities = 206/240 (85%), Positives = 220/240 (91%)
 Frame = +2

Query: 140 MEYVTPEGFRLDGRRPMEMRQLRAEIGVVSRADGSAVFEMGNTKVIAAVYGPREVKNRSE 319
           ME+V+PEG RLDGRRPMEMRQ+R EIG V++ADGSA FEMGNTKVIAAVYGPREV+NRS+
Sbjct: 1   MEFVSPEGLRLDGRRPMEMRQIRGEIGAVAKADGSAFFEMGNTKVIAAVYGPREVENRSQ 60

Query: 320 QLNDQALVRCEYSMANFSTXXXXXXXXXXXXSTEISLVIRQTMEACILTHLMPRSQIDIF 499
           Q++DQALVRCEY+MANFST            STEISLVIRQTMEACILTHLMPRSQIDIF
Sbjct: 61  QISDQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIF 120

Query: 500 VQVLQADGGTRSACINAATLALADAGIPMSDLVTSCSAGYLNNTPLLDLNYVEDSAGGPD 679
           VQVLQADGGTRSACINAATLALADAGIPM DLVTSCSAGYLN+TPLLDLNYVEDSAGGPD
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 680 VTVGILPKLDKVTLLQMDAKLPMNILENVMQLATEGCKAVANYIREVLLNNTKQLEFRRG 859
           VTVGILPKLDKVTLLQMDAKLPM+I ENVMQLA EGCKA+ANYIREVLL NTKQLE+RRG
Sbjct: 181 VTVGILPKLDKVTLLQMDAKLPMDIFENVMQLAIEGCKAIANYIREVLLENTKQLEYRRG 240


>ref|XP_003549686.1| PREDICTED: exosome complex component RRP41-like [Glycine max]
          Length = 241

 Score =  407 bits (1045), Expect = e-111
 Identities = 204/241 (84%), Positives = 222/241 (92%)
 Frame = +2

Query: 140 MEYVTPEGFRLDGRRPMEMRQLRAEIGVVSRADGSAVFEMGNTKVIAAVYGPREVKNRSE 319
           MEYV+PEG RLDGRRPMEMRQ+RAEIG VS+ADGSA+FEMGNTKVIAAVYGPREV+NR++
Sbjct: 1   MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRNQ 60

Query: 320 QLNDQALVRCEYSMANFSTXXXXXXXXXXXXSTEISLVIRQTMEACILTHLMPRSQIDIF 499
           Q++  ALVRCEYSMANFST            STEISLVIRQTMEACILTHL+PRSQIDI+
Sbjct: 61  QISSHALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLLPRSQIDIY 120

Query: 500 VQVLQADGGTRSACINAATLALADAGIPMSDLVTSCSAGYLNNTPLLDLNYVEDSAGGPD 679
           VQVLQADGGTRSACINAATLALADAGIPM DLVTSCSAGYLN+TPLLDLNYVEDSAGGPD
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 680 VTVGILPKLDKVTLLQMDAKLPMNILENVMQLATEGCKAVANYIREVLLNNTKQLEFRRG 859
           VT+GILPKLDKVTLLQMD+KLP++ILENVMQLA EGCKA+ANYIREVLL NTKQLE+RRG
Sbjct: 181 VTLGILPKLDKVTLLQMDSKLPIDILENVMQLAIEGCKAIANYIREVLLENTKQLEYRRG 240

Query: 860 V 862
           V
Sbjct: 241 V 241


>ref|XP_002530509.1| Exosome complex exonuclease RRP41, putative [Ricinus communis]
           gi|223529966|gb|EEF31893.1| Exosome complex exonuclease
           RRP41, putative [Ricinus communis]
          Length = 241

 Score =  406 bits (1044), Expect = e-111
 Identities = 205/241 (85%), Positives = 220/241 (91%)
 Frame = +2

Query: 140 MEYVTPEGFRLDGRRPMEMRQLRAEIGVVSRADGSAVFEMGNTKVIAAVYGPREVKNRSE 319
           MEYV+PEG RLDGRRPMEMRQLRA+IG VS+ADGSAVFEMGNTKVIAAVYGPREV+NRS+
Sbjct: 1   MEYVSPEGLRLDGRRPMEMRQLRAQIGAVSKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60

Query: 320 QLNDQALVRCEYSMANFSTXXXXXXXXXXXXSTEISLVIRQTMEACILTHLMPRSQIDIF 499
           Q+ DQALVRCEY+MANFST            STEISLVIRQTME CILTHLMPRSQIDI+
Sbjct: 61  QIIDQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIY 120

Query: 500 VQVLQADGGTRSACINAATLALADAGIPMSDLVTSCSAGYLNNTPLLDLNYVEDSAGGPD 679
           VQVLQADGGTRSACINAATLALADAGIPM DLVTSCSAGYLN+TPLLDLNYVEDSAGGPD
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 680 VTVGILPKLDKVTLLQMDAKLPMNILENVMQLATEGCKAVANYIREVLLNNTKQLEFRRG 859
           VTVGILPKLDKVTLLQMDAKLP++  ENVMQLA EGCKA+ANYIRE+LL NTKQLE+RRG
Sbjct: 181 VTVGILPKLDKVTLLQMDAKLPIDTFENVMQLAVEGCKAIANYIREILLENTKQLEYRRG 240

Query: 860 V 862
           +
Sbjct: 241 L 241


>ref|XP_003554748.1| PREDICTED: exosome complex component RRP41-like [Glycine max]
          Length = 241

 Score =  405 bits (1040), Expect = e-110
 Identities = 203/241 (84%), Positives = 221/241 (91%)
 Frame = +2

Query: 140 MEYVTPEGFRLDGRRPMEMRQLRAEIGVVSRADGSAVFEMGNTKVIAAVYGPREVKNRSE 319
           MEYV+PEG RLDGRRPMEMRQ+RAEIG VS+ADGSA+FEMGNTKVIAAVYGPREV+NRS+
Sbjct: 1   MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRSQ 60

Query: 320 QLNDQALVRCEYSMANFSTXXXXXXXXXXXXSTEISLVIRQTMEACILTHLMPRSQIDIF 499
           Q++  ALVRCEY MANFST            STEISLVIRQTMEACILTHL+PRSQIDI+
Sbjct: 61  QISSHALVRCEYCMANFSTGDRMRKSKGDRRSTEISLVIRQTMEACILTHLLPRSQIDIY 120

Query: 500 VQVLQADGGTRSACINAATLALADAGIPMSDLVTSCSAGYLNNTPLLDLNYVEDSAGGPD 679
           VQVLQADGGTRSACINAATLALADAGIPM DLVTSCSAGYLN+TPLLDLNYVEDSAGGPD
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 680 VTVGILPKLDKVTLLQMDAKLPMNILENVMQLATEGCKAVANYIREVLLNNTKQLEFRRG 859
           VT+GILPKLDKVTLLQMD+KLP++ILENVMQLA EGCKA+ANYIRE+LL NTKQLE+RRG
Sbjct: 181 VTLGILPKLDKVTLLQMDSKLPIDILENVMQLAIEGCKAIANYIREILLANTKQLEYRRG 240

Query: 860 V 862
           V
Sbjct: 241 V 241