BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017117
         (2861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274485.2| PREDICTED: uncharacterized protein LOC100252...   939   0.0  
ref|XP_004134467.1| PREDICTED: uncharacterized protein LOC101206...   863   0.0  
ref|XP_003547347.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   818   0.0  
ref|XP_003594626.1| DEAD-box ATP-dependent RNA helicase [Medicag...   800   0.0  
ref|NP_187299.1| DEAD-box ATP-dependent RNA helicase 40 [Arabido...   786   0.0  

>ref|XP_002274485.2| PREDICTED: uncharacterized protein LOC100252874 [Vitis vinifera]
          Length = 1165

 Score =  939 bits (2428), Expect = 0.0
 Identities = 518/918 (56%), Positives = 598/918 (65%), Gaps = 31/918 (3%)
 Frame = -1

Query: 2744 METAEEAPANLGPRFAPDDPTLPQPWKGLIDGATGVLYYWNPETNVTQYEKXXXXXXXXX 2565
            M TAE AP++LGPR+APDDPTLP+PWKGLIDG+TG+LYYWNPETN+TQYEK         
Sbjct: 1    MATAEPAPSSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNITQYEKPTALPPPLP 60

Query: 2564 XXXXPAAVTPKLAAFPGDRVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFMTQ 2385
                PAA TPKLA  P  R                                      M+Q
Sbjct: 61   PGPPPAAATPKLAPIPAARTMQTNGSLAHHGQQMNQAQQQQGQQMMQTSQQQGQQ--MSQ 118

Query: 2384 VAQHHXXXXXXXXXXXXXXXXXXXXXXGHFRPQMMQQPGQHIPTQFGQ-----PG----- 2235
              Q H                        F   + QQ GQ  P Q GQ     PG     
Sbjct: 119  FPQQH--GQLMSQQQGPQMAQSVQQPGPQFGQALQQQ-GQLTPQQLGQQIVQHPGQQMQS 175

Query: 2234 -------VRPGHQISQPVMQQTPVQVGHQAQQYPGVSAGQQQGFQYPYHQSHHMNYQQHL 2076
                    +P  Q+ Q +  QTP  +G Q  Q+PG    Q Q  QY + Q  +  YQQH+
Sbjct: 176  QSLQQMPQQPSQQLPQQLGPQTPQLLGQQTPQHPGSQMAQPQVHQYAHQQMQYNVYQQHV 235

Query: 2075 PPQAQQNSQHPVQYGIQGQQFPAKVEHRTGFPQRDEADTEQANQIAFLSTHSQQMGPSST 1896
            PP  QQNSQ   Q+  QG  F  + E +TGFPQR+E D  Q +Q+ F  +  QQ G SS 
Sbjct: 236  PPPGQQNSQQQTQHIAQGPPFQKQQEFKTGFPQREEIDFHQGSQVGFSPSQIQQTGTSSA 295

Query: 1895 QNLPSGTNSTQPRPISAHSAQPVVSTVSSGNILQPKVFPPGPLDGHNLDHLSHGPRYPNN 1716
            QN+P+G  S Q       + Q    +  S ++ Q                  H PR+ N 
Sbjct: 296  QNMPAGVKSFQMPQSGGQTGQAQPFSGPSVSMQQ-----------------QHDPRFQNQ 338

Query: 1715 VGPVTMQGQQSNGPSVGPKFGYEGSPLQRRGSEYGLSSN-EGPMVSPQHPKLAAIPMGRN 1539
            +GP  M  QQ N P  G K GY+ +P    G++Y  S+N E P+   Q PKLAAIP  RN
Sbjct: 339  MGPGMMHSQQPNIPPAGLKRGYDENPRGTAGNDYYFSANKEVPLSVSQQPKLAAIPSARN 398

Query: 1538 ------------QQDMRRGNAPLQNVHPTPTMNFSSGVVRPPLPNMYGH-VAGPPFPNDA 1398
                         Q+MR G  P+ NV P      ++ V    + NMY H   G  F N+A
Sbjct: 399  PQAIADDVVALPYQEMRMGGVPVPNVPPGHAGGLNA-VAGQAMHNMYSHATGGTGFSNNA 457

Query: 1397 MAMQPSTMMGHADALHLSPADAYRKTHEVTATGDNVPNPFMTFEATGFPPELLRELLSAG 1218
            +   PS M+G +D   LSP + Y + HEVTATG+NVP P MTFEATGFPPE+LRE+ SAG
Sbjct: 458  LMRPPSMMIGSSDISTLSPVEVYCQQHEVTATGENVPPPLMTFEATGFPPEILREIYSAG 517

Query: 1217 FSSPTPIQAQTWPIAIQKRDIVAIAKTGSGKTLGYMIPAFLHLRSLRNNPQNGPSVLVLS 1038
            FSSPTPIQAQTWPIA+Q RDIVAIAKTGSGKTLGY+IPAF+ LR  RNN QNGP+V+VL+
Sbjct: 518  FSSPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFILLRRRRNNVQNGPTVMVLA 577

Query: 1037 PTRELATQIQDEAIKFGRSLRVSCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEM 858
            PTRELATQIQDE IKFGRS RVSC CLYGG  +  QLKEL+RGAD+VVATPGRLNDILE 
Sbjct: 578  PTRELATQIQDETIKFGRSSRVSCACLYGGTSRNAQLKELDRGADVVVATPGRLNDILES 637

Query: 857  KRIDFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAGDLL 678
            K+ID  Q+SLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAGDLL
Sbjct: 638  KKIDLGQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAGDLL 697

Query: 677  VNPVQVNIGRVDELAANKSISQYVEFVPQMEKQRRLEQILRSEERGSKIIIFCSTKKLCD 498
            VNPVQVNIG VDELAANK+I+QYVE V   EKQRRLEQILRS+ERGSK+IIFCSTKKLCD
Sbjct: 698  VNPVQVNIGSVDELAANKAITQYVEVVSPPEKQRRLEQILRSQERGSKVIIFCSTKKLCD 757

Query: 497  HLSRSIGRNFGAAAIHGDKSQGERDFVLNQFRSGKCPILVATDVAARGLDVKDIRVVINY 318
             L+RSIGRNFGAA IHGDKSQ ERD+VLNQFRSGK PILVATDVAARGLD+KDIRVVINY
Sbjct: 758  QLARSIGRNFGAAVIHGDKSQVERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINY 817

Query: 317  DFPTGIEDYVHRIXXXXXXXXXGVAYTFISDQDWKYAPDLVKLMEGANQHVPPELKEMAL 138
            DFPTGIEDYVHRI         GV+YTF S+QD KYA DL+K++EGANQ VPPE+++MAL
Sbjct: 818  DFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDCKYAADLIKVLEGANQRVPPEVRDMAL 877

Query: 137  RGGPNFSRDRGDVSRFQS 84
            R GP F +DRG V+RF S
Sbjct: 878  RSGPGFGKDRGGVNRFDS 895


>ref|XP_004134467.1| PREDICTED: uncharacterized protein LOC101206109 [Cucumis sativus]
          Length = 1152

 Score =  863 bits (2229), Expect = 0.0
 Identities = 464/747 (62%), Positives = 538/747 (72%), Gaps = 7/747 (0%)
 Frame = -1

Query: 2300 HFRPQMMQQPGQHIPTQFGQPGVRPGHQISQPVMQQTPVQVGHQAQQYPGVSAGQQQGFQ 2121
            H   QM Q P Q      GQ    PG Q+ QP +Q     +G      P    GQ QG Q
Sbjct: 180  HANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQH----LGQPNMHNPKPLVGQPQGPQ 235

Query: 2120 YPYHQSHHMNYQQHLPPQAQQNSQHPVQYGIQGQQFPAKVEHRTGFPQRDEADTEQANQI 1941
            Y   Q  ++ YQQ L P  QQNSQ  VQ     Q F   +E +  F +R+E + +  NQ+
Sbjct: 236  YGQQQLQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQV 295

Query: 1940 AFLSTHSQQMGPS-STQNLPSGTNSTQPRPISAHSAQPVVSTVSSGNILQPKVFPPGPLD 1764
             F S+  QQ G + S  NL SGTNS+Q +P+   S Q      S GN+ Q    P G + 
Sbjct: 296  GFSSSQFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQ--LPVGQVQ 353

Query: 1763 --GHNLDHLSHGPRYPNNVGPVTMQGQQSNGPSVGPKFGYEGSPLQRRGSEYGLSSNEGP 1590
              G  L H  H  R+ + +GP  + GQQ    ++            R G+EY    NEG 
Sbjct: 354  HAGTELTHRHHHSRFQDQMGPAVIPGQQPVAENLPG----------RGGNEYYFGRNEGS 403

Query: 1589 MVSPQHPKLAAIPMGRNQQDMRRGNAPLQNV---HPTPTMNFSSGVVRPPLPNMYGHVAG 1419
               P  P+LAAIPM R+QQD R   AP  +    HP+ T  F+ G    P  N+Y H +G
Sbjct: 404  GPGPHQPRLAAIPMARSQQDSRMSGAPFPSAAPGHPSGT-KFAGG----PTHNLYNHGSG 458

Query: 1418 -PPFPNDAMAMQPSTMMGHADALHLSPADAYRKTHEVTATGDNVPNPFMTFEATGFPPEL 1242
                PN+A+   P   +G +D  ++SP + YR+ HEVTATGDNVP PFMTFEATGFPPE+
Sbjct: 459  GSSLPNNALMGPPH--VGASDVTNMSPVEVYRRQHEVTATGDNVPAPFMTFEATGFPPEI 516

Query: 1241 LRELLSAGFSSPTPIQAQTWPIAIQKRDIVAIAKTGSGKTLGYMIPAFLHLRSLRNNPQN 1062
            LRE+ SAGFSSPTPIQAQTWPIA+Q RDIVAIAKTGSGKTLGY++PAF+ LR  RNNPQN
Sbjct: 517  LREIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLLPAFILLRQCRNNPQN 576

Query: 1061 GPSVLVLSPTRELATQIQDEAIKFGRSLRVSCTCLYGGAPKGPQLKELERGADIVVATPG 882
            GP+VLVL+PTRELATQIQDEAIKFGRS RV CTCLYGGAPKGPQLKEL+RGADIVVATPG
Sbjct: 577  GPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPG 636

Query: 881  RLNDILEMKRIDFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEV 702
            RLNDILEMK I+FRQ+SLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEV
Sbjct: 637  RLNDILEMKMINFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEV 696

Query: 701  RKIAGDLLVNPVQVNIGRVDELAANKSISQYVEFVPQMEKQRRLEQILRSEERGSKIIIF 522
            RKIA DLLVN VQVNIG VDELAANK+I+QYVE VPQMEKQRRLEQILRS+ERGSK+IIF
Sbjct: 697  RKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIF 756

Query: 521  CSTKKLCDHLSRSIGRNFGAAAIHGDKSQGERDFVLNQFRSGKCPILVATDVAARGLDVK 342
            CSTK+LCD L+R++GR FGAAAIHGDKSQGERD+VLNQFRSGK PILVATDVAARGLD+K
Sbjct: 757  CSTKRLCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIK 816

Query: 341  DIRVVINYDFPTGIEDYVHRIXXXXXXXXXGVAYTFISDQDWKYAPDLVKLMEGANQHVP 162
            DIRVVIN+DFPTGIEDYVHRI         GVAYTF S+QDWK+A DL+K++EGA Q VP
Sbjct: 817  DIRVVINFDFPTGIEDYVHRIGRTGRAGATGVAYTFFSEQDWKFASDLIKVLEGAGQPVP 876

Query: 161  PELKEMALRGGPNFSRDRGDVSRFQSA 81
            PEL+ MA+RGGP+F +DRG + RF +A
Sbjct: 877  PELRNMAMRGGPSFGKDRGGMGRFDAA 903



 Score = 99.0 bits (245), Expect = 6e-18
 Identities = 41/51 (80%), Positives = 47/51 (92%)
 Frame = -1

Query: 2744 METAEEAPANLGPRFAPDDPTLPQPWKGLIDGATGVLYYWNPETNVTQYEK 2592
            MET + AP +LGPR+APDDPTLP+PWKGLIDG+TG+ YYWNPETNVTQYEK
Sbjct: 1    METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEK 51


>ref|XP_003547347.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like [Glycine max]
          Length = 1188

 Score =  818 bits (2114), Expect = 0.0
 Identities = 453/770 (58%), Positives = 534/770 (69%), Gaps = 35/770 (4%)
 Frame = -1

Query: 2288 QMMQQP-GQHIPTQ-FGQPGVRP-GHQISQPVMQ--------QTPVQVGHQAQQYPGVSA 2142
            QMMQQP GQ +  Q  GQ  ++P GHQ  Q +MQ        Q P Q  H      G+  
Sbjct: 158  QMMQQPQGQQMMQQPQGQQMMQPQGHQARQQMMQPQGQQMHRQMPPQAIHSQHFVQGMPQ 217

Query: 2141 G------QQQGFQYPYHQSHHMNYQQHLPPQAQQNSQHP--------------VQYGIQG 2022
                   Q Q  Q+     H+M+YQQ+     Q NSQH               VQ+ + G
Sbjct: 218  DHGSHIVQPQTHQFTPQNMHYMSYQQNAITSRQPNSQHSQPNMVSPGQPNSQQVQHNMHG 277

Query: 2021 QQFPAKVEHRTGFPQRDEADTEQANQIAFLSTHSQQMGP---SSTQNLPSGTNSTQPRPI 1851
            Q F      +T +P+ +E D++  +Q+    +   Q       + QN+P+   S Q   +
Sbjct: 278  QPFE---NQQTTYPKVEEVDSKNGSQVGHSPSQYPQRSALPVQNNQNIPAEVGSGQVPNV 334

Query: 1850 SAHSAQPVVSTVSSGNILQPKVFPPGPLDGHNLDHLSHGPRYPNNVGPVTMQGQQSNGPS 1671
              ++ QP      S ++ Q          G +L +  HGP + + + P  M G  SN   
Sbjct: 335  GVNAGQPQQFRALSNSMQQSP-------SGSDL-YYQHGPNFHSQMSPGMMHGHPSNVLP 386

Query: 1670 VGPKFGYEGSPLQRRGSEYGLSSNEG-PMVSPQHPKLAAIPMGRNQQDMRRGNAPLQNVH 1494
             G K G E S   R G+EY  +SN+    +  Q P +  IP+ RNQQDMR GN P QNV 
Sbjct: 387  SGQKMGPEDSLRVRAGNEYYYNSNKDMATMGRQQPDITPIPIPRNQQDMRIGNTPFQNVM 446

Query: 1493 PTPTMNFSSGVVRPPLPNMYGHVAGPPFPNDAMAMQPSTMMGHADALHLSPADAYRKTHE 1314
            P+      SG+    +P+M+    G P P     +     MG +DA  LSPA+ Y + HE
Sbjct: 447  PSGN---GSGIAGNAVPSMFVPPIGGPSPLSTNPLMRPPYMGSSDATDLSPAEIYCQQHE 503

Query: 1313 VTATGDNVPNPFMTFEATGFPPELLRELLSAGFSSPTPIQAQTWPIAIQKRDIVAIAKTG 1134
            VTATGDN+P PFMTF+ATGFPPE+LRE+ SAGFSSPTPIQAQTWP+A+Q RDIVAIAKTG
Sbjct: 504  VTATGDNIPPPFMTFDATGFPPEILREIYSAGFSSPTPIQAQTWPVALQGRDIVAIAKTG 563

Query: 1133 SGKTLGYMIPAFLHLRSLRNNPQNGPSVLVLSPTRELATQIQDEAIKFGRSLRVSCTCLY 954
            SGKTLGY++PAF+ LR   NN  NGP+VLVL+PTRELATQIQDE +KFGRS RVSCTCLY
Sbjct: 564  SGKTLGYLMPAFILLRQRCNNSLNGPTVLVLAPTRELATQIQDEVVKFGRSSRVSCTCLY 623

Query: 953  GGAPKGPQLKELERGADIVVATPGRLNDILEMKRIDFRQVSLLVLDEADRMLDMGFEPQI 774
            GGAPK  QLKEL+RGADIVVATPGRLNDILEMK+IDF QVSLLVLDEADRMLDMGFEPQI
Sbjct: 624  GGAPKALQLKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQI 683

Query: 773  RKIVNEIPPRRQTLMYTATWPKEVRKIAGDLLVNPVQVNIGRVDELAANKSISQYVEFVP 594
            RKIVNEIPPRRQTLMYTATWPKEVRKIA DLLVNPVQVNIG VDELAANK+I+QYVE VP
Sbjct: 684  RKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKAITQYVEVVP 743

Query: 593  QMEKQRRLEQILRSEERGSKIIIFCSTKKLCDHLSRSIGRNFGAAAIHGDKSQGERDFVL 414
            QMEKQRRLEQILRS+ERGSK+IIFCSTK+LCD L+RSIGR FGAAAIHGDKSQGERD+VL
Sbjct: 744  QMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARSIGRTFGAAAIHGDKSQGERDWVL 803

Query: 413  NQFRSGKCPILVATDVAARGLDVKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXGVAYTF 234
            +QFR+GK PILVATDVAARGLD+KDIRVVINYDFPTGIEDYVHRI         GV+YTF
Sbjct: 804  SQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTF 863

Query: 233  ISDQDWKYAPDLVKLMEGANQHVPPELKEMALRGGPNFSRDRGDVSRFQS 84
             S+QDWK+A DL+K++EGANQHV PEL++MALRG  NF +DRG VSRF S
Sbjct: 864  FSEQDWKHAGDLIKVLEGANQHVLPELRQMALRGPSNFGKDRGGVSRFDS 913



 Score =  101 bits (252), Expect = 1e-18
 Identities = 50/77 (64%), Positives = 54/77 (70%)
 Frame = -1

Query: 2744 METAEEAPANLGPRFAPDDPTLPQPWKGLIDGATGVLYYWNPETNVTQYEKXXXXXXXXX 2565
            M TAE A A LGPR+APDDPTLPQPWKGLIDG+TG+LYYWNPETNVTQYEK         
Sbjct: 1    MATAEAASAGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEK--------P 52

Query: 2564 XXXXPAAVTPKLAAFPG 2514
                P+   P LA  PG
Sbjct: 53   TPPVPSGPAPSLAPIPG 69


>ref|XP_003594626.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355483674|gb|AES64877.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 1182

 Score =  800 bits (2065), Expect = 0.0
 Identities = 439/762 (57%), Positives = 523/762 (68%), Gaps = 25/762 (3%)
 Frame = -1

Query: 2294 RPQMMQQPGQHIPTQFGQPGVRPGHQISQPVMQQTPVQVGHQAQQYPGVSAGQQQGFQYP 2115
            RPQMMQ  GQ +    GQ   +  H    P     P Q G    Q  G    Q Q  Q+ 
Sbjct: 142  RPQMMQPQGQPMMQYQGQQQYQQMHHQMPPQAIPRPQQFGQGNSQDHGSQLVQPQAPQFT 201

Query: 2114 YHQSHHMNYQQHLPPQAQQNSQ------HPV--------QYGIQGQQFPAKVEHRTGFPQ 1977
                H+M YQQ++    Q NSQ      HP         Q+ I  Q F  + + +   P+
Sbjct: 202  PQNMHYMGYQQNMISPRQPNSQQIQPNMHPSGQPNPQQNQHNIHNQPFENQHDFKPAMPK 261

Query: 1976 RDEADTEQANQIAFL-STHSQQMG--PSSTQNLPSGTNSTQPRPISAHSAQPVVSTVSSG 1806
             +EA+ +  +Q+ F  S + Q+ G    + QN+P+  +S Q      ++ QP      SG
Sbjct: 262  MEEAEFKNGSQVGFSPSQYPQRSGLPVQNNQNIPAEVSSGQVPNAGVNAGQPQQFRGFSG 321

Query: 1805 NILQPKVFPPGPLDGHNLDHLSHGPRYPNNVGPVTMQGQQSNGPSVGPKFGYEGSPLQRR 1626
             + Q          G +L +  HGP + N + P  M G  SN   V  K G+E +   R 
Sbjct: 322  GMQQSTPTMQSQQGGSDLFY-QHGPNFQNQMSPGMMHGHTSNAHPVAQKMGHEDNLHGRG 380

Query: 1625 GSEYGLSSN-EGPMVSPQHPKLAAIPMGRNQQDMRRGNAPLQNVHPTPTMNFSSGVVRPP 1449
            G++Y  +SN E P +  Q P +  +P+ RN QDMR GN+P QN  P+      SG+    
Sbjct: 381  GNDYYYNSNKEMPPMGRQQPDMTQMPIPRNPQDMRIGNSPFQNNVPSGN---GSGITGNA 437

Query: 1448 LPNMYGHVAGPPFPNDAMAMQPSTMMGHADALHLSPADAYRKTHEVTATGDNVPNPFMTF 1269
            + NM+    G P    + +       G +D   LS A+ Y + HEVTA+GDN+P PFMTF
Sbjct: 438  MSNMFTPPIGGPSALSSNSFTRPPYGGSSDVTDLSAAELYCQQHEVTASGDNIPPPFMTF 497

Query: 1268 EATGFPPELLRELLSAGFSSPTPIQAQTWPIAIQKRDIVAIAKTGSGKTLGYMIPAFLHL 1089
            ++TGFPPE+L+E+ SAGFS+PTPIQAQTWPIA+Q RDIVAIAKTGSGKTLGY++PAF+ L
Sbjct: 498  DSTGFPPEILQEVCSAGFSNPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLMPAFILL 557

Query: 1088 RSLRNNPQNGPSVLVLSPTRELATQIQDEAIKFGRSLRVSCTCLYGGAPKGPQLKELERG 909
            R  RNN  NGP+VLVL+PTRELATQIQ+E  KF RS RVSCTCLYGGAPK  QLKEL+RG
Sbjct: 558  RQRRNNSLNGPTVLVLAPTRELATQIQEEVFKFARSSRVSCTCLYGGAPKALQLKELDRG 617

Query: 908  ADIVVATPGRLNDILEMKRIDFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLM 729
            ADIVVATPGRLNDILEMK+IDF QVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLM
Sbjct: 618  ADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLM 677

Query: 728  YTATWPKEVRKIAGDLLVNPVQVNIGRVDELAANKSISQYVEFVPQMEKQRRLEQILRSE 549
            YTATWPKEVRKIAGDLLVNPVQVNIG VDELAANKSI+QYVE VPQMEKQRRLEQILRS+
Sbjct: 678  YTATWPKEVRKIAGDLLVNPVQVNIGNVDELAANKSITQYVEVVPQMEKQRRLEQILRSQ 737

Query: 548  ERGSKIIIFCSTKKLCDHLSRSIGRNFGAAAIHGDKSQGERDFVLNQFRSGKCPILVATD 369
            ERGSKIIIFCSTKKLCD L+RSIGR FGAAAIHGDKSQGERD+VL QFR+GK PILVATD
Sbjct: 738  ERGSKIIIFCSTKKLCDQLARSIGRTFGAAAIHGDKSQGERDWVLGQFRTGKSPILVATD 797

Query: 368  VAARGLDVKDI-------RVVINYDFPTGIEDYVHRIXXXXXXXXXGVAYTFISDQDWKY 210
            VAARGLD+KDI       RVVINYDFP G+EDYVHRI         GVAYTF S+QDWK+
Sbjct: 798  VAARGLDIKDIRLVSLYVRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFFSEQDWKH 857

Query: 209  APDLVKLMEGANQHVPPELKEMALRGGPNFSRDRGDVSRFQS 84
            A DL+K++EGANQHV PEL+++A RG P+F +DRG ++RF S
Sbjct: 858  AGDLIKVLEGANQHVLPELRQIASRGPPSFGKDRGGMNRFDS 899



 Score = 91.7 bits (226), Expect = 1e-15
 Identities = 48/76 (63%), Positives = 51/76 (67%)
 Frame = -1

Query: 2744 METAEEAPANLGPRFAPDDPTLPQPWKGLIDGATGVLYYWNPETNVTQYEKXXXXXXXXX 2565
            M T E A    GPR+APDDPTLP PWKGLIDG+TG+LYYWNPETNVTQYEK         
Sbjct: 1    MATTEAA----GPRYAPDDPTLPTPWKGLIDGSTGLLYYWNPETNVTQYEK-----PGPV 51

Query: 2564 XXXXPAAVTPKLAAFP 2517
                PAA TP LA  P
Sbjct: 52   NPPAPAASTPSLAPIP 67


>ref|NP_187299.1| DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana]
            gi|75313790|sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box
            ATP-dependent RNA helicase 40
            gi|6437557|gb|AAF08584.1|AC011623_17 putative RNA
            helicase [Arabidopsis thaliana]
            gi|332640879|gb|AEE74400.1| DEAD-box ATP-dependent RNA
            helicase 40 [Arabidopsis thaliana]
          Length = 1088

 Score =  786 bits (2031), Expect = 0.0
 Identities = 437/761 (57%), Positives = 524/761 (68%), Gaps = 22/761 (2%)
 Frame = -1

Query: 2300 HFRPQMMQQ-PGQHIPTQFGQ-------------PGVRPGHQISQPVMQQTPVQVGHQAQ 2163
            H RPQMMQQ P Q +P Q GQ             P   P  Q  QP  QQ    + +Q  
Sbjct: 107  HVRPQMMQQHPAQQMPQQSGQQFPQQQSQSMVPHPHGHPSVQTYQPTTQQQQQGMQNQHS 166

Query: 2162 QYPGVSAGQQQGFQYPYHQSHHMNYQQHLPPQAQQNSQHPVQYGIQGQQFPAKVEHRTGF 1983
            Q P     QQ   QY + Q H+M ++ H+  Q  QNS    Q G  GQQFP++ E+ +  
Sbjct: 167  QMP-----QQLSHQYAHSQQHYMGFRPHMQTQGLQNSHQTPQGGPHGQQFPSQQEYNSLA 221

Query: 1982 PQRDEADTEQANQIAFLSTHSQQMGPSSTQNLPSGTNSTQPRPISAHSAQPVVSTVSSGN 1803
            P+R+  +     +  F   H      S +QN     N+   +  +A+ A          N
Sbjct: 222  PKREGDEFHGGKKTGFSQPHLPNSERSPSQNTHFEANAASQKT-NANLAMAQKCNGPQAN 280

Query: 1802 ILQPKVFPPGPLDGHNLDHLSHGPRYPNNVGPVTMQGQQSNGPSVGPKFGYEGSPLQRRG 1623
                +   PG     NL H   GPR PN +   TM  Q+S+         YE +   R G
Sbjct: 281  AAVTQFQQPGA----NLIHQQLGPRAPNQMDQ-TMLHQKSHVSPFQSNNTYENNLQSRPG 335

Query: 1622 SE-YGLSSNEGPM--VSPQHPKLAAIPMGRNQQDMRRGNAPLQNVHPTPTMNFSSGVVRP 1452
            ++ Y     E P+    P HP  AA+P     +D+R    P  N  P             
Sbjct: 336  NDSYVNMRMEVPVRGAQPLHP--AAMP-----KDIRISGGPPTNADPAMGQTGHG----- 383

Query: 1451 PLPNMYGHVAGPPFPNDAMAMQPSTMMGHADALHLSPADAYRKTHEVTATGDNVPNPFMT 1272
                 YGH AGP FPN ++ ++P  +    D  HLSP + YRK HEVT TG+N+P P++T
Sbjct: 384  ----TYGH-AGPAFPNKSL-VRPHFVTS-PDVPHLSPVEIYRKQHEVTTTGENIPAPYIT 436

Query: 1271 FEATGFPPELLRELLSAGFSSPTPIQAQTWPIAIQKRDIVAIAKTGSGKTLGYMIPAFLH 1092
            FE++G PPE+LRELLSAGF SPTPIQAQTWPIA+Q RDIVAIAKTGSGKTLGY+IPAF+ 
Sbjct: 437  FESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFIL 496

Query: 1091 LRSLRNNPQNGPSVLVLSPTRELATQIQDEAIKFGRSLRVSCTCLYGGAPKGPQLKELER 912
            LR  RN+ +NGP+VL+L+PTRELATQIQDEA++FGRS R+SCTCLYGGAPKGPQLKELER
Sbjct: 497  LRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELER 556

Query: 911  GADIVVATPGRLNDILEMKRIDFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTL 732
            GADIVVATPGRLNDILEMK IDF+QVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTL
Sbjct: 557  GADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTL 616

Query: 731  MYTATWPKEVRKIAGDLLVNPVQVNIGRVDELAANKSISQYVEFVPQMEKQRRLEQILRS 552
            MYTATWPKEVRKIA DLLVNPVQVNIGRVDELAANK+I+QYVE VPQMEK+RRLEQILRS
Sbjct: 617  MYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRS 676

Query: 551  EERGSKIIIFCSTKKLCDHLSRSIGRNFGAAAIHGDKSQGERDFVLNQFRSGKCPILVAT 372
            +ERGSK+IIFCSTK+LCDHL+RS+GR+FGA  IHGDK+QGERD+VLNQFRSGK  +L+AT
Sbjct: 677  QERGSKVIIFCSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIAT 736

Query: 371  DVAARGLDVKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXGVAYTFISDQDWKYAPDLVK 192
            DVAARGLD+KDIRVVINYDFPTG+EDYVHRI         GVA+TF ++QDWKYAPDL+K
Sbjct: 737  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIK 796

Query: 191  LMEGANQHVPPELKEMALR----GGPNFSRD-RGDVSRFQS 84
            ++EGANQ VPP+++++A+R    GGP +S+D RG V+RF S
Sbjct: 797  VLEGANQQVPPQVRDIAMRGGGGGGPGYSQDRRGMVNRFDS 837



 Score =  103 bits (256), Expect = 3e-19
 Identities = 47/76 (61%), Positives = 55/76 (72%)
 Frame = -1

Query: 2744 METAEEAPANLGPRFAPDDPTLPQPWKGLIDGATGVLYYWNPETNVTQYEKXXXXXXXXX 2565
            M T E+ PA+ GPR+AP+DPTLPQPWKGLIDG+TG+LYYWNPETNVTQYE+         
Sbjct: 1    MATTEDTPASAGPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNVTQYER-------PS 53

Query: 2564 XXXXPAAVTPKLAAFP 2517
                 +A TPKLA  P
Sbjct: 54   APPPHSATTPKLAQIP 69