BLASTX nr result

ID: Lithospermum22_contig00017086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017086
         (1076 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527773.1| conserved hypothetical protein [Ricinus comm...   301   2e-79
ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis ...   298   2e-78
ref|XP_003532508.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   290   6e-76
gb|AFK41645.1| unknown [Lotus japonicus]                              284   2e-74
ref|XP_002315864.1| predicted protein [Populus trichocarpa] gi|2...   281   2e-73

>ref|XP_002527773.1| conserved hypothetical protein [Ricinus communis]
           gi|223532808|gb|EEF34583.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 332

 Score =  301 bits (770), Expect = 2e-79
 Identities = 155/307 (50%), Positives = 204/307 (66%), Gaps = 5/307 (1%)
 Frame = +2

Query: 62  NENTNSSTHFTQPHEAIFLVLSYLPVFELIEMSQVCKSLRDAVENDILPWLNIMVDKPLS 241
           NE+ N       PHEA+FLVL+YLPVFEL+ MS+VC SLRDAV  D+LPWL I+VD+PLS
Sbjct: 33  NESANQQAEPGPPHEALFLVLAYLPVFELLNMSEVCMSLRDAVNRDLLPWLTIIVDRPLS 92

Query: 242 SRLSDDHLMKITSKSNGLLRSLALINCYRVTDDALLVVVTRNPLLEKLFVPGCRRLTPGG 421
           SRLSD+ LMKI SK+N  LR+L L NC ++TDD L  V+ +NP + KL +P C  LTP G
Sbjct: 93  SRLSDEILMKIASKANCRLRTLILRNCTKITDDGLEKVIEKNPYINKLHLPACTGLTPEG 152

Query: 422 VIKAVKMVPK----LRSLKINGIYNVNKDDLQTLHTLIGENLSATHRKGFNLYHHMDRTI 589
           +IKAVK++ +    L+SL+INGIYN+ K  L+TL++ +  N S  H+    LYH    + 
Sbjct: 153 IIKAVKILSQHPNSLKSLQINGIYNLKKQHLETLYSYLQMNPS-QHKPQHILYHIYRISP 211

Query: 590 SSAFEHEGQLNSLIDVDICPRCQEVRMVFDCPRESCMMKLQQSTSSPRLEIIRCRACYYC 769
           SS     G+   ++DVDICP+C EV++VFDC RE+CM K  +  +        CR C +C
Sbjct: 212 SSRSTESGR---IVDVDICPQCNEVQIVFDCSRETCMQKRDRLVAD-------CRGCNFC 261

Query: 770 IPRCIECGVCI-KDEVGETACSDTLCLDCWLKLPKCNFCNKAYCRNHVDQKVEYSNTSDG 946
           I RC ECG CI  +E  + AC+D LC DCWL L KCN+CNK YC+ H +Q+   S    G
Sbjct: 262 ISRCEECGGCIDAEEQEDAACADILCSDCWLCLSKCNYCNKPYCKRHTNQQFS-SPGFCG 320

Query: 947 FLCATCN 967
           F+C  C+
Sbjct: 321 FICEACH 327


>ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis vinifera]
          Length = 338

 Score =  298 bits (763), Expect = 2e-78
 Identities = 144/302 (47%), Positives = 207/302 (68%), Gaps = 6/302 (1%)
 Frame = +2

Query: 98  PHEAIFLVLSYLPVFELIEMSQVCKSLRDAVENDILPWLNIMVDKPLSSRLSDDHLMKIT 277
           PHEA+ LVL+YLP+FEL+ MS+VC+SLRDAV+ D+L WL+I+V+KPL+   SD+ ++K+T
Sbjct: 45  PHEALLLVLAYLPLFELLNMSEVCRSLRDAVDKDVLQWLDIIVEKPLNMLFSDEIMIKLT 104

Query: 278 SKSNGLLRSLALINCYRVTDDALLVVVTRNPLLEKLFVPGCRRLTPGGVIKAVKMVPK-- 451
           SK+NG LR+LAL++C ++TDD L  V+ +NPL+ +L++P C  LTP G+++AVK + +  
Sbjct: 105 SKANGRLRTLALMSCTKITDDGLQQVIEKNPLINRLYLPACTGLTPEGIMRAVKTLTEHY 164

Query: 452 --LRSLKINGIYNVNKDDLQTLHTLIGENLSATHRKGFNL-YHHMDRTISSAFEHEGQLN 622
             L+ ++ING+YN+ K+ L+TL + +  N +    +   L + H  R IS     E    
Sbjct: 165 QALKCVRINGVYNMKKEHLETLSSYLQMNPAKMEGQMQQLCFFHDHRNISVLRVEESY-- 222

Query: 623 SLIDVDICPRCQEVRMVFDCPRESCMMKLQQSTSSPRLEIIRCRACYYCIPRCIECGVCI 802
             ID++ICPRC EVRMVFDCPRE+C  K +++       +  CR CY+CIPRC ECG CI
Sbjct: 223 RPIDLEICPRCNEVRMVFDCPRETCKKKRERA-------MAECRGCYFCIPRCEECGKCI 275

Query: 803 K-DEVGETACSDTLCLDCWLKLPKCNFCNKAYCRNHVDQKVEYSNTSDGFLCATCNEEHL 979
           + +E GE  C+D LC DCWL+LPKCNFCN+ YC  H + +   S  S GF+C  C+   +
Sbjct: 276 EVEEPGEVVCADVLCSDCWLQLPKCNFCNRPYCSRHANLQHSTSG-STGFICCICHVNFI 334

Query: 980 DD 985
            D
Sbjct: 335 GD 336


>ref|XP_003532508.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP28-like [Glycine
           max]
          Length = 313

 Score =  290 bits (741), Expect = 6e-76
 Identities = 145/296 (48%), Positives = 197/296 (66%), Gaps = 5/296 (1%)
 Frame = +2

Query: 98  PHEAIFLVLSYLPVFELIEMSQVCKSLRDAVENDILPWLNIMVDKPLSSRLSDDHLMKIT 277
           PHEA+FLVL+YLPV+E++ MSQVC SLRDAV NDILPWLN+ V +PLS RL+DD L+KIT
Sbjct: 22  PHEAMFLVLAYLPVYEVVVMSQVCTSLRDAVNNDILPWLNVFVQRPLSWRLNDDILIKIT 81

Query: 278 SKSNGLLRSLALINCYRVTDDALLVVVTRNPLLEKLFVPGCRRLTPGGVIKAVKMVPK-- 451
           SK+NG L++LALINC  VTD+ L  VV +NPL+ KL +P C  +TP GV++AVK + +  
Sbjct: 82  SKANGSLKTLALINCMHVTDEGLQRVVQQNPLINKLHIPACTGITPXGVLRAVKTLCQRS 141

Query: 452 --LRSLKINGIYNVNKDDLQTLHTLIGENLSATHRKGFNLYHHMDRTISSAFEHEGQLNS 625
             L++L INGIYN+ K+ L  L   +G+N     ++    YH   R   S F+ E +   
Sbjct: 142 NCLKTLSINGIYNIQKEHLDMLIVNLGKNQPLEEQQEPVYYH--KRCNFSVFKQE-ESRR 198

Query: 626 LIDVDICPRCQEVRMVFDCPRESCMMKLQQSTSSPRLEIIRCRACYYCIPRCIECGVCIK 805
           LID++ICPRC EVRMV+DCP+  C  +           +  CR C +CIP+C  CG CI+
Sbjct: 199 LIDLEICPRCFEVRMVYDCPKGHCTRR--------EWPLAPCRGCNFCIPKCENCGGCIE 250

Query: 806 D-EVGETACSDTLCLDCWLKLPKCNFCNKAYCRNHVDQKVEYSNTSDGFLCATCNE 970
             EV E  C D  CL+CWL++PKC+FCNK YC+ H++     +++    +C  C+E
Sbjct: 251 SGEVEEGDCEDIFCLECWLQIPKCSFCNKPYCKQHIN----CTSSDSSLICKVCDE 302


>gb|AFK41645.1| unknown [Lotus japonicus]
          Length = 322

 Score =  284 bits (727), Expect = 2e-74
 Identities = 144/317 (45%), Positives = 205/317 (64%), Gaps = 5/317 (1%)
 Frame = +2

Query: 65   ENTNSSTHFTQPHEAIFLVLSYLPVFELIEMSQVCKSLRDAVENDILPWLNIMVDKPLSS 244
            E   + T    PHEA+FLVL+YLPV++++ MSQVCK+LRDAV ND+LPWLN++V++PLSS
Sbjct: 16   EKGQAQTEQEPPHEALFLVLTYLPVYQVLAMSQVCKALRDAVNNDVLPWLNVIVERPLSS 75

Query: 245  RLSDDHLMKITSKSNGLLRSLALINCYRVTDDALLVVVTRNPLLEKLFVPGCRRLTPGGV 424
            RLSD+ L+KITSK+NG L++LAL+NC  +TD  L  VV +NPL  KL +P C  +T  GV
Sbjct: 76   RLSDEILVKITSKANGRLKTLALMNCTHITDKGLQRVVEQNPLTNKLHIPACTGITAEGV 135

Query: 425  IKAVKMVPK----LRSLKINGIYNVNKDDLQTLHTLIGENLSATHRKGFNLYHHMDRTIS 592
             +AV+ + +    L +L+INGIYN+ K+ L  L   + +N+    ++     ++  R   
Sbjct: 136  TRAVQTLCQRSNCLSTLRINGIYNLQKEHLDMLAMNLRKNVPLEEQQMQKPNYYHKRGSF 195

Query: 593  SAFEHEGQLNSLIDVDICPRCQEVRMVFDCPRESCMMKLQQSTSSPRLEIIRCRACYYCI 772
            + F  E +   +ID++ CP+C EV MV+DCP+  CM + +          ++CR C +CI
Sbjct: 196  TVFSRE-ENQRIIDLETCPKCFEVTMVYDCPKVECMKREKPQ--------VQCRGCKFCI 246

Query: 773  PRCIECGVCI-KDEVGETACSDTLCLDCWLKLPKCNFCNKAYCRNHVDQKVEYSNTSDGF 949
            PRC  CG C+  +E  E AC+D LCL+CWL+LPKCNFCNK YC+ H  +    S+    F
Sbjct: 247  PRCENCGGCVGSEEEEEAACADILCLECWLQLPKCNFCNKPYCKQH--ENWWCSSLDPIF 304

Query: 950  LCATCNEEHLDDHTSQD 1000
            LC  C +EH   +T  D
Sbjct: 305  LCRVC-DEHSHGYTYTD 320


>ref|XP_002315864.1| predicted protein [Populus trichocarpa] gi|222864904|gb|EEF02035.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  281 bits (720), Expect = 2e-73
 Identities = 142/297 (47%), Positives = 194/297 (65%), Gaps = 5/297 (1%)
 Frame = +2

Query: 98  PHEAIFLVLSYLPVFELIEMSQVCKSLRDAVENDILPWLNIMVDKPLSSRLSDDHLMKIT 277
           PHEA+F VL+YL VF+L+ MS+VC  LRDAV  D+LPW +I++++PL+SRLSD+ L++IT
Sbjct: 30  PHEALFFVLAYLDVFDLLVMSEVCMPLRDAVSKDVLPWRDIIIERPLNSRLSDEILVQIT 89

Query: 278 SKSNGLLRSLALINCYRVTDDALLVVVTRNPLLEKLFVPGCRRLTPGGVIKAVKMVPK-- 451
           SK++G LR+LALINC+++TDD L  V+ +N L+ KL VPGC  LTP G+I+ VK + +  
Sbjct: 90  SKAHGRLRTLALINCFKITDDGLQTVIEKNHLISKLHVPGCSGLTPEGIIRTVKTLSQHH 149

Query: 452 --LRSLKINGIYNVNKDDLQTLHTLIGENLSATHRKGFNLYHHMDRTISSAFEHEGQLNS 625
             L SL+INGI+N+ K+ L+T+ + +   ++  H+K                     +  
Sbjct: 150 NSLESLQINGIHNLKKEHLETISSHL--QMNPPHQK------------------PQPILR 189

Query: 626 LIDVDICPRCQEVRMVFDCPRESCMMKLQQSTSSPRLEIIRCRACYYCIPRCIECGVCIK 805
           +IDVDICP+C EVR VFDCPR +       S S        CR CY+CI RC ECG C+ 
Sbjct: 190 MIDVDICPKCNEVRTVFDCPRAT-------SKSGREHSFTHCRGCYFCISRCEECGQCVD 242

Query: 806 D-EVGETACSDTLCLDCWLKLPKCNFCNKAYCRNHVDQKVEYSNTSDGFLCATCNEE 973
           D E+ ET C   LC DCWL LPKC FCN+AYC+ H +Q+    + S GFLC  CNE+
Sbjct: 243 DEELEETLCFGILCTDCWLLLPKCCFCNQAYCKQHENQRCSLPD-STGFLCDLCNEK 298


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