BLASTX nr result

ID: Lithospermum22_contig00017070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017070
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC53941.1| H2A histone [Nicotiana tabacum]                        82   4e-14
ref|XP_003597343.1| Histone H2A [Medicago truncatula] gi|1089360...    82   6e-14
dbj|BAK05993.1| predicted protein [Hordeum vulgare subsp. vulgare]     82   6e-14
sp|P25469.1|H2A1_SOLLC RecName: Full=Histone H2A.1; AltName: Ful...    81   1e-13
sp|P25470.1|H2A1_PEA RecName: Full=Histone H2A.1                       81   1e-13

>dbj|BAC53941.1| H2A histone [Nicotiana tabacum]
          Length = 148

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 43/66 (65%), Positives = 49/66 (74%)
 Frame = -2

Query: 198 MDSSTVTIXXXXXXXXXXXXXKSVTKSVKAGLQFPVGRVARYLKKGRYAQRTGVGAPIFL 19
           M+++T T              KSVTKSVKAGLQFPVGR+AR+LKKGRYAQR G GAPI+L
Sbjct: 1   MEAATKTTKGAGGRKGGGPRKKSVTKSVKAGLQFPVGRIARFLKKGRYAQRVGSGAPIYL 60

Query: 18  AAVLEY 1
           AAVLEY
Sbjct: 61  AAVLEY 66


>ref|XP_003597343.1| Histone H2A [Medicago truncatula]
           gi|108936002|sp|Q2HU65.1|H2A2_MEDTR RecName:
           Full=Probable histone H2A.2 gi|87240422|gb|ABD32280.1|
           Histone H2A; Histone-fold [Medicago truncatula]
           gi|355486391|gb|AES67594.1| Histone H2A [Medicago
           truncatula] gi|388520599|gb|AFK48361.1| unknown
           [Medicago truncatula] gi|388520959|gb|AFK48541.1|
           unknown [Medicago truncatula]
          Length = 153

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/66 (62%), Positives = 48/66 (72%)
 Frame = -2

Query: 198 MDSSTVTIXXXXXXXXXXXXXKSVTKSVKAGLQFPVGRVARYLKKGRYAQRTGVGAPIFL 19
           MD+ST T              KSVT+S++AGLQFPVGR+ RYLKKGRYAQR G GAP++L
Sbjct: 1   MDASTKTKKGAGGRKGGGPRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYL 60

Query: 18  AAVLEY 1
           AAVLEY
Sbjct: 61  AAVLEY 66


>dbj|BAK05993.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 156

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/44 (86%), Positives = 41/44 (93%)
 Frame = -2

Query: 132 SVTKSVKAGLQFPVGRVARYLKKGRYAQRTGVGAPIFLAAVLEY 1
           SVT+SVKAGLQFPVGR+ RYLKKGRYAQR G GAP+FLAAVLEY
Sbjct: 26  SVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVFLAAVLEY 69


>sp|P25469.1|H2A1_SOLLC RecName: Full=Histone H2A.1; AltName: Full=LeH2A-1
           gi|355477218|gb|AES12482.1| putative histone 2A protein
           [Solanum lycopersicum]
          Length = 146

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/44 (86%), Positives = 41/44 (93%)
 Frame = -2

Query: 132 SVTKSVKAGLQFPVGRVARYLKKGRYAQRTGVGAPIFLAAVLEY 1
           SVTKS+KAGLQFPVGR+ RYLKKGRYAQR G GAPI+LAAVLEY
Sbjct: 21  SVTKSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPIYLAAVLEY 64


>sp|P25470.1|H2A1_PEA RecName: Full=Histone H2A.1
          Length = 150

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/66 (63%), Positives = 48/66 (72%)
 Frame = -2

Query: 198 MDSSTVTIXXXXXXXXXXXXXKSVTKSVKAGLQFPVGRVARYLKKGRYAQRTGVGAPIFL 19
           MD+ST T              KSVT+SV+AGLQFPVGRV R+LKKGRYAQR G GAP++L
Sbjct: 1   MDASTKTKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRVGRFLKKGRYAQRVGTGAPVYL 60

Query: 18  AAVLEY 1
           AAVLEY
Sbjct: 61  AAVLEY 66


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