BLASTX nr result

ID: Lithospermum22_contig00017067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017067
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa...   110   1e-22
gb|AEY84990.1| 60S ribosomal protein L39 [Wolffia australiana]        109   3e-22
ref|XP_003572901.1| PREDICTED: 60S ribosomal protein L39-like [B...   109   3e-22
gb|AFW64137.1| 60S ribosomal protein L39, partial [Zea mays]          108   4e-22
ref|XP_003603321.1| 60S ribosomal protein L39 [Medicago truncatu...   107   9e-22

>dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa Japonica Group]
          Length = 118

 Score =  110 bits (276), Expect = 1e-22
 Identities = 50/54 (92%), Positives = 52/54 (96%)
 Frame = +2

Query: 77  SATMPSHKSFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 238
           +ATMPSHK+F IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 65  AATMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 118


>gb|AEY84990.1| 60S ribosomal protein L39 [Wolffia australiana]
          Length = 51

 Score =  109 bits (272), Expect = 3e-22
 Identities = 49/51 (96%), Positives = 50/51 (98%)
 Frame = +2

Query: 86  MPSHKSFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 238
           MPSHKSF+IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1   MPSHKSFLIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51


>ref|XP_003572901.1| PREDICTED: 60S ribosomal protein L39-like [Brachypodium distachyon]
          Length = 97

 Score =  109 bits (272), Expect = 3e-22
 Identities = 49/54 (90%), Positives = 52/54 (96%)
 Frame = +2

Query: 77  SATMPSHKSFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 238
           +ATMPSHK+F IK+KLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 44  AATMPSHKTFRIKQKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 97


>gb|AFW64137.1| 60S ribosomal protein L39, partial [Zea mays]
          Length = 77

 Score =  108 bits (271), Expect = 4e-22
 Identities = 49/54 (90%), Positives = 51/54 (94%)
 Frame = +2

Query: 77  SATMPSHKSFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 238
           +A MPSHK+F IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 24  AAAMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 77


>ref|XP_003603321.1| 60S ribosomal protein L39 [Medicago truncatula]
           gi|355492369|gb|AES73572.1| 60S ribosomal protein L39
           [Medicago truncatula] gi|388513831|gb|AFK44977.1|
           unknown [Medicago truncatula]
           gi|388516927|gb|AFK46525.1| unknown [Medicago
           truncatula]
          Length = 51

 Score =  107 bits (268), Expect = 9e-22
 Identities = 48/51 (94%), Positives = 50/51 (98%)
 Frame = +2

Query: 86  MPSHKSFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 238
           MPSHK+F+IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1   MPSHKTFVIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51


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