BLASTX nr result

ID: Lithospermum22_contig00017057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017057
         (1612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30029.3| unnamed protein product [Vitis vinifera]              171   4e-40
ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223...   158   3e-36
ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794...   155   3e-35
ref|XP_002303179.1| chromatin remodeling complex subunit [Populu...   152   2e-34
ref|XP_003535126.1| PREDICTED: uncharacterized protein LOC100795...   146   2e-32

>emb|CBI30029.3| unnamed protein product [Vitis vinifera]
          Length = 1695

 Score =  171 bits (434), Expect = 4e-40
 Identities = 124/331 (37%), Positives = 183/331 (55%), Gaps = 7/331 (2%)
 Frame = +1

Query: 43   HPVHCCERFRELVQRHVLSPAETVGNDXXXXXXXXXXLLRVTEDNLRLLLDVASKFTDNE 222
            HPVHCCERFRELVQR+VLS  E   N+          LL+VTEDN+R+LLDVA    D+E
Sbjct: 1335 HPVHCCERFRELVQRYVLSAPENPNNEKVSNTGSGKALLKVTEDNIRMLLDVAIDLPDSE 1394

Query: 223  PLLQSHFFALISSVCKAISS-HGQRSMLSHLAGDLYLSEKQLTSKVNDSHRSSMMKPLKK 399
             LLQ HF AL++SV +  S  H +++ L +  G  Y + +  +S VN    +S+ +P ++
Sbjct: 1395 LLLQKHFTALLTSVWRMTSRVHHRQNHLPYRNGQ-YSTGRFFSSTVNQISWNSVREPTER 1453

Query: 400  MNF-SMSPHCGKLVAAALLNDHNAELDKNLTPVNRKIE-ALVGERLDMILNVYGENSDCT 573
             N+ +      +LVAAAL + +N + D +    NR+ E + V E+L++ L +  +  D  
Sbjct: 1454 TNWNNFGYSSSRLVAAALHDANNKQHDDSAFLSNRREEVSTVPEQLEIRLEIERDFCDSM 1513

Query: 574  TPMPSVINVSIYGADSPSLDTSAVINS-CFKSCHANAEKEFRALSKACVEDSFGCASLP- 747
             P+PSVIN+SI G++ PS   + +  S   KS    AE  FRA S+AC + +   AS   
Sbjct: 1514 IPLPSVINLSILGSEPPSAVNNPIEESQILKSSQDMAENRFRAASRACFDGTLDWASSAF 1573

Query: 748  QSGEVNHRSLSWSMSLGKHK-QPLDPVRPFKTKMRK-AAEPSGVRGLASDTSSQPTGPHS 921
             + ++  RS   S SLGKHK    D +RP K+K +K A EPS +  L      +PT   +
Sbjct: 1574 PTSDIKPRSAIKSHSLGKHKICTSDSIRPSKSKFKKVAVEPSEMHHLILSPLPKPTVAFN 1633

Query: 922  DDSHVSLDRVHFPVYDLSGGYPCDMSNGLAS 1014
            D +         P +DL  G P  +  G+++
Sbjct: 1634 DSN---------PRFDL--GSPVSLDAGIST 1653


>ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223537355|gb|EEF38984.1|
            Helicase, putative [Ricinus communis]
          Length = 2029

 Score =  158 bits (400), Expect = 3e-36
 Identities = 126/371 (33%), Positives = 183/371 (49%), Gaps = 15/371 (4%)
 Frame = +1

Query: 43   HPVHCCERFRELVQRHVLSPAETVGNDXXXXXXXXXXLLRVTEDNLRLLLDVASKFTDNE 222
            HPVHCCERFREL+QR+VLS  E   N+          LL+VTEDN++ LL+ A++  D+E
Sbjct: 1663 HPVHCCERFRELIQRYVLSTPENPINEKACNTGSGKALLKVTEDNIQKLLNFATEQPDHE 1722

Query: 223  PLLQSHFFALISSVCKAISSHGQRSMLSHLAGDLYLSEKQLTSKVNDSHRSSMMKPLKKM 402
             LLQ HF AL+SSV +  S   ++   S     LY   + L S  N    +SM +P K+M
Sbjct: 1723 LLLQKHFTALLSSVWRMTSRTDRQPHFSSSRNGLYFGGR-LFSSFNQISLNSMKEPAKRM 1781

Query: 403  NFSMSPHCGKLVAAALLNDHNAELDKNLTPVNRKIEA-LVGERLDMILNVYGENSDCTTP 579
              +      +L+A+AL   ++  +D  ++ +NR        E+L++ L    E +D   P
Sbjct: 1782 RITNLSESSRLLASALHEANSRPMDDTVSILNRMENVPSTSEQLEITLEFEKEETDSLVP 1841

Query: 580  MPSVINVSIYGADSPSLDTSAV-INSCFKSCHANAEKEFRALSKACVEDSFGCASLP-QS 753
            +P VIN+SI  +DS    T  V   +  K+    AE  FR  ++AC E   G AS    +
Sbjct: 1842 LPPVINLSIPLSDSQRFITKDVGEENRIKASMNVAESRFRDAARACDEGGLGWASSAFPA 1901

Query: 754  GEVNHRSLSWSMSLGKHKQPL-DPVRPFKTKMRKAAEPSGVRG--LASDTSSQPTGPHSD 924
             ++  R      SLGKHK  L D V+P ++K+++  E   +    LA      P      
Sbjct: 1902 NDIKLRPGPKPQSLGKHKPSLPDTVKPPRSKLKRTLEHGEIHQYLLAEPVFQSPHAVSPR 1961

Query: 925  DSHVSLDRVHFPVYD----LSGGYPCD-MSNGLASEEDPIDVVPLEYVHGSIYGLESLDD 1089
            D ++  D     + D     + GY      N L+ E   ++ VP  YV   I G   LDD
Sbjct: 1962 DPNLKFDLTPAVLQDGWTNDTYGYSISCFDNELSLEIGSLEAVPHNYVPDLISG---LDD 2018

Query: 1090 CS----FSDIG 1110
            CS    F+DIG
Sbjct: 2019 CSLLPEFTDIG 2029


>ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794898 [Glycine max]
          Length = 2041

 Score =  155 bits (392), Expect = 3e-35
 Identities = 123/367 (33%), Positives = 189/367 (51%), Gaps = 9/367 (2%)
 Frame = +1

Query: 43   HPVHCCERFRELVQRHVLSPAETVGNDXXXXXXXXXXLLRVTEDNLRLLLDVASKFTDNE 222
            HPVHCCERF EL Q++VL   +   ++          LL+VTEDN+R+LLDVAS+  + E
Sbjct: 1680 HPVHCCERFGELFQKYVLLSLDNANHEKINSPGSGKALLKVTEDNIRMLLDVASEQVNRE 1739

Query: 223  PLLQSHFFALISSVCKAISSHGQRSMLSHLAGDLYLSEKQLTSKVNDSHRSSMMKPLKKM 402
             LLQ HFFAL+SSV K  S   +R         LY  +   TS +    ++S+ K  K+M
Sbjct: 1740 LLLQKHFFALLSSVWKVASHVDRRRNPLPTCNGLYFDQSFYTS-IGQPSQNSLKKSSKRM 1798

Query: 403  NFSMSPHCGKLVAAALLNDHNAELDKNLTPVNRKIEALV-GERLDMILNVYGENSDCTTP 579
             F+      KLVAAAL +    +++  +   N+  +  V  ++LD+ L    E+SD  + 
Sbjct: 1799 TFTNLAQSKKLVAAALDDITTRQVNDKVILSNQGEDMPVSADQLDITLEFTKEDSDVLSS 1858

Query: 580  MPSVINVSIYGAD-SPSLDTSAVINSCFKSCHANAEKEFRALSKACVEDSFGCASLP-QS 753
             PSVIN+SI G + +PSL+     +   K     AE  FR  ++ C EDS G AS    +
Sbjct: 1859 FPSVINLSIIGTEPTPSLNKQTGEDD-LKVGLFIAENRFREAARVCEEDSSGWASSAFPT 1917

Query: 754  GEVNHRSLSWSMSLGKHKQPL-DPVRPFKTKMRKAA-EPSGVRGLASDTSSQPTGPHSDD 927
             +   R+ S   S GK K  + D  +P ++K +KA+ +PS +    +D+  Q + P   D
Sbjct: 1918 NDARSRAGSRIQSSGKQKSSMSDSSKPSRSKSKKASMDPSEMHHHQADSKFQ-SMPSLKD 1976

Query: 928  SHV---SLDRVHFPVYDLSGGYPCDMSNGLASEEDPIDVVPLEYVHGSIYGLESLDDC-S 1095
              +   SL      +  +   +  D++   + E + + ++P +YV G I     LDDC +
Sbjct: 1977 LRIDLTSLTTDEVGIDSMGSIFSFDLNGESSLEMESVGMIPHDYVAGLI---SDLDDCTA 2033

Query: 1096 FSDIGDI 1116
            F +  DI
Sbjct: 2034 FPEYTDI 2040


>ref|XP_002303179.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222840611|gb|EEE78158.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1682

 Score =  152 bits (385), Expect = 2e-34
 Identities = 117/364 (32%), Positives = 180/364 (49%), Gaps = 8/364 (2%)
 Frame = +1

Query: 43   HPVHCCERFRELVQRHVLS-PAETVGNDXXXXXXXXXXLLRVTEDNLRLLLDVASKFTDN 219
            HPVHCCERFREL+ R+VLS P   + N+          LL+VTEDN+R+LL+VA++  D+
Sbjct: 1319 HPVHCCERFRELIHRYVLSSPEYPINNEKMSNMVSGKALLKVTEDNIRMLLNVAAEQPDH 1378

Query: 220  EPLLQSHFFALISSVCKAISSHGQRSMLSHLAGDLYLSEKQLTSKVNDSHRSSMMKPLKK 399
            E LLQ HF AL+S+V +  S   ++  LS     LY   +   S VN    +S  +  K+
Sbjct: 1379 ELLLQKHFTALLSAVWRVNSRAERQQNLSSSRNALYNHGRVFNSSVNQLPSNSSKESAKR 1438

Query: 400  MNFSMSPHCGKLVAAALLNDHNAELDKNLTPVN-RKIEALVGERLDMILNVYGENSDCTT 576
            M F+   H  KL+A AL +  +   D  ++  N  ++   +GE+L++ L    E  D   
Sbjct: 1439 MKFTNLGHSSKLLADALHDASSRRPDDRVSYSNLSEVAPAIGEQLEITLEFQKEEDDSLI 1498

Query: 577  PMPSVINVSI-YGADSPSLDTSAVINSCFKSCHANAEKEFRALSKACVEDSFG-CASLPQ 750
              P +I++SI   A   S++         ++  + AE  FR  ++ACVE   G  +S   
Sbjct: 1499 QFPPIISLSIPSSAPLTSVNKDRAEAHHLRASTSIAENRFRDAARACVEGDLGWVSSSAP 1558

Query: 751  SGEVNHRSLSWSMSLGKHKQPL-DPVRPFKTKMRKAAEPSGVRGLASDTSSQPTGP-HSD 924
            + +   R  S + SLGKHK  + +  +P ++KM+K         L ++  SQP     S 
Sbjct: 1559 ANDFKLRLPSKTQSLGKHKLSVSESTKPPRSKMKKTLIEHSQGHLFAEPVSQPLPVLSSR 1618

Query: 925  DSHVSLDRVHFPVYDLSGGYPCD-MSNGLASEEDPIDVVPLEYVHGSIYGLESLDDC-SF 1098
            D ++  D     + D    Y    +   L++E    D V  +YV G   GL+       F
Sbjct: 1619 DPNLRFDLPPIAIQDDKDEYSISCIEKELSAEMGTWDAVAHDYVLGFTSGLDDFSSLPEF 1678

Query: 1099 SDIG 1110
            +DIG
Sbjct: 1679 TDIG 1682


>ref|XP_003535126.1| PREDICTED: uncharacterized protein LOC100795613 [Glycine max]
          Length = 2057

 Score =  146 bits (368), Expect = 2e-32
 Identities = 119/366 (32%), Positives = 185/366 (50%), Gaps = 8/366 (2%)
 Frame = +1

Query: 43   HPVHCCERFRELVQRHVLSPAETVGNDXXXXXXXXXXLLRVTEDNLRLLLDVASKFTDNE 222
            HPV CCERFREL Q++VL   +   ++          LL+VTEDN+R+LLDVAS+  + E
Sbjct: 1696 HPVQCCERFRELFQKYVLLSMDNANHEKINSPGSGKALLKVTEDNIRMLLDVASEQVNRE 1755

Query: 223  PLLQSHFFALISSVCKAISSHGQRSMLSHLAGDLYLSEKQLTSKVNDSHRSSMMKPLKKM 402
             LLQ HFFAL+SSV K  S    R   S     LY  +   TS +    ++S+ K  ++M
Sbjct: 1756 LLLQKHFFALLSSVWKVASHVDHRRNPSPSCNGLYFDQSFYTS-IGQPSQNSLKKSSERM 1814

Query: 403  NFSMSPHCGKLVAAALLNDHNAELDKNLTPVNRKIEALV-GERLDMILNVYGENSDCTTP 579
             F+       LVAAAL +    +++  +   N+  +  V  ++LD+ L    E+SD  + 
Sbjct: 1815 AFANLAPSKNLVAAALDDITTRQVNDKVILSNQGEDMPVSADQLDITLEFAKEDSDVLSS 1874

Query: 580  MPSVINVSIYGAD-SPSLDTSAVINSCFKSCHANAEKEFRALSKACVEDSFGCASLP-QS 753
             PSVIN+SI+G + +PSL+         K     AE  FR  ++ C EDS G AS    +
Sbjct: 1875 FPSVINLSIHGTEPTPSLN-KLTGEDDLKVGLFIAENRFREAARVCGEDSSGWASSAFPT 1933

Query: 754  GEVNHRSLSWSMSLGKHKQPL-DPVRPFKTKMRKAA-EPSGVRGLASDTSSQPTGPHSDD 927
             +   R  S   S GK K  + D  +P ++K +KA+ + S +    +D+  Q + P   D
Sbjct: 1934 NDTRSRPGSRLQSSGKRKSSVSDSSKPSRSKSKKASMDRSEMHPYQADSMFQ-SMPSLKD 1992

Query: 928  SHVSLDRVHFPVYDLSGG---YPCDMSNGLASEEDPIDVVPLEYVHGSIYGLESLDDCSF 1098
              + L  +      + G    +  D++   + E + + ++P +YV G I  L+  D  +F
Sbjct: 1993 LRIDLTSLTTDEVGIDGMDSIFSFDLNGESSLEMESVGMIPHDYVAGLISDLD--DSTAF 2050

Query: 1099 SDIGDI 1116
             +  DI
Sbjct: 2051 PEYTDI 2056


Top