BLASTX nr result
ID: Lithospermum22_contig00017018
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00017018
(1012 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002519191.1| pentatricopeptide repeat-containing protein,... 120 5e-25
ref|XP_002311400.1| predicted protein [Populus trichocarpa] gi|2... 113 6e-23
ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat... 110 4e-22
ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat... 101 3e-19
ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 101 3e-19
>ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541506|gb|EEF43055.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 719
Score = 120 bits (301), Expect = 5e-25
Identities = 55/95 (57%), Positives = 71/95 (74%)
Frame = +2
Query: 2 PDIFSFNALIQSYCRNNQIEKAQRLLISMLTLDLRPDNFTYSAFIKALCGRGRFDEVKVL 181
PD+FSFNALIQS+CR ++E A++L SML+L L PDN+TY AFIK C GRF+E K L
Sbjct: 600 PDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKEL 659
Query: 182 FWSMEDNGCPPDAFTCNSYIETLIGSDRLEEAQEV 286
F SME NGC PD+FTCN ++ L+ D+ E AQ++
Sbjct: 660 FLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKI 694
Score = 65.9 bits (159), Expect = 2e-08
Identities = 36/104 (34%), Positives = 56/104 (53%)
Frame = +2
Query: 2 PDIFSFNALIQSYCRNNQIEKAQRLLISMLTLDLRPDNFTYSAFIKALCGRGRFDEVKVL 181
PDIF+F+++I CR QIE A M+ L P+ TY+ I +LC G L
Sbjct: 530 PDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKL 589
Query: 182 FWSMEDNGCPPDAFTCNSYIETLIGSDRLEEAQEVFSGYDYLGL 313
M+ +G PD F+ N+ I++ ++E+A+++FS LGL
Sbjct: 590 LRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGL 633
>ref|XP_002311400.1| predicted protein [Populus trichocarpa] gi|222851220|gb|EEE88767.1|
predicted protein [Populus trichocarpa]
Length = 548
Score = 113 bits (283), Expect = 6e-23
Identities = 56/109 (51%), Positives = 72/109 (66%)
Frame = +2
Query: 2 PDIFSFNALIQSYCRNNQIEKAQRLLISMLTLDLRPDNFTYSAFIKALCGRGRFDEVKVL 181
PDIFSFNALIQS+CR ++EKA+++ +SM TL L P+N+TY A +KAL GR DE K +
Sbjct: 437 PDIFSFNALIQSFCRMGKVEKAEKMFVSMSTLGLIPNNYTYGALVKALFELGRCDEAKKM 496
Query: 182 FWSMEDNGCPPDAFTCNSYIETLIGSDRLEEAQEVFSGYDYLGLQVKPI 328
F+SME NGC PD+FTCN E L EE Q + G+ +K I
Sbjct: 497 FFSMEVNGCVPDSFTCNLISENLFKQGDFEELQNIAKICSERGIALKSI 545
Score = 66.2 bits (160), Expect = 1e-08
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +2
Query: 2 PDIFSFNALIQSYCRNNQIEKAQRLLISMLTLDLRPDNFTYSAFIKALCGRGRFDEVKVL 181
P++ +FN LI +C++ ++ KA+ LL +L L L+PD FT+S+ I LC +FD+
Sbjct: 332 PNLVTFNTLISGHCKDGEVHKARELLQMLLELGLKPDIFTFSSIIDCLCRAQQFDDALGC 391
Query: 182 FWSMEDNGCPPDAFTCNSYIETL 250
F M + G P+A T N I +L
Sbjct: 392 FSEMVEWGISPNAVTYNILIRSL 414
Score = 61.6 bits (148), Expect = 3e-07
Identities = 32/104 (30%), Positives = 54/104 (51%)
Frame = +2
Query: 2 PDIFSFNALIQSYCRNNQIEKAQRLLISMLTLDLRPDNFTYSAFIKALCGRGRFDEVKVL 181
PDIF+F+++I CR Q + A M+ + P+ TY+ I++LC G L
Sbjct: 367 PDIFTFSSIIDCLCRAQQFDDALGCFSEMVEWGISPNAVTYNILIRSLCLIGDVGRSMKL 426
Query: 182 FWSMEDNGCPPDAFTCNSYIETLIGSDRLEEAQEVFSGYDYLGL 313
M +G PD F+ N+ I++ ++E+A+++F LGL
Sbjct: 427 LKDMRKDGISPDIFSFNALIQSFCRMGKVEKAEKMFVSMSTLGL 470
>ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 110 bits (276), Expect = 4e-22
Identities = 52/109 (47%), Positives = 73/109 (66%)
Frame = +2
Query: 2 PDIFSFNALIQSYCRNNQIEKAQRLLISMLTLDLRPDNFTYSAFIKALCGRGRFDEVKVL 181
PD +S+NALIQ +CR N++EKA++L SM L PDN+TYSAFI+AL GR +E K +
Sbjct: 567 PDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKM 626
Query: 182 FWSMEDNGCPPDAFTCNSYIETLIGSDRLEEAQEVFSGYDYLGLQVKPI 328
F+SME NGC PD++ CN I+ L+ + +EEAQ + G+ + I
Sbjct: 627 FYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGISLNSI 675
Score = 68.6 bits (166), Expect = 2e-09
Identities = 34/96 (35%), Positives = 57/96 (59%)
Frame = +2
Query: 2 PDIFSFNALIQSYCRNNQIEKAQRLLISMLTLDLRPDNFTYSAFIKALCGRGRFDEVKVL 181
P+ +N LI+S C + ++ +LL M + PD ++Y+A I+ C + ++ K L
Sbjct: 532 PNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKL 591
Query: 182 FWSMEDNGCPPDAFTCNSYIETLIGSDRLEEAQEVF 289
F SM +G PD +T +++IE L S RLEEA+++F
Sbjct: 592 FDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMF 627
Score = 60.8 bits (146), Expect = 5e-07
Identities = 31/83 (37%), Positives = 49/83 (59%)
Frame = +2
Query: 2 PDIFSFNALIQSYCRNNQIEKAQRLLISMLTLDLRPDNFTYSAFIKALCGRGRFDEVKVL 181
P++ +FN LI +C++ I+KA++LL S+L L+PD FT+S+ + LC R +E
Sbjct: 462 PNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALEC 521
Query: 182 FWSMEDNGCPPDAFTCNSYIETL 250
F M + G P+A N I +L
Sbjct: 522 FTEMIEWGINPNAVIYNILIRSL 544
Score = 60.5 bits (145), Expect = 6e-07
Identities = 33/111 (29%), Positives = 54/111 (48%)
Frame = +2
Query: 5 DIFSFNALIQSYCRNNQIEKAQRLLISMLTLDLRPDNFTYSAFIKALCGRGRFDEVKVLF 184
++FS+N +I +CR ++ A M + P+ T++ I C G D+ + L
Sbjct: 428 NVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLL 487
Query: 185 WSMEDNGCPPDAFTCNSYIETLIGSDRLEEAQEVFSGYDYLGLQVKPII*N 337
S+ +NG PD FT +S ++ L R EEA E F+ G+ +I N
Sbjct: 488 ESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYN 538
>ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Cucumis sativus]
Length = 697
Score = 101 bits (252), Expect = 3e-19
Identities = 45/86 (52%), Positives = 63/86 (73%)
Frame = +2
Query: 2 PDIFSFNALIQSYCRNNQIEKAQRLLISMLTLDLRPDNFTYSAFIKALCGRGRFDEVKVL 181
PD FSFNALIQ Y N+ +KA++L SML L ++PDN+TY A IK+LC GR D+ + +
Sbjct: 612 PDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREI 671
Query: 182 FWSMEDNGCPPDAFTCNSYIETLIGS 259
F SM++NGC PD++TC+ + +TL S
Sbjct: 672 FLSMKENGCTPDSYTCSLFSDTLAHS 697
Score = 66.2 bits (160), Expect = 1e-08
Identities = 32/96 (33%), Positives = 57/96 (59%)
Frame = +2
Query: 2 PDIFSFNALIQSYCRNNQIEKAQRLLISMLTLDLRPDNFTYSAFIKALCGRGRFDEVKVL 181
P++ ++N LI S+C + ++ LL M ++PD F+++A I+ G+ RF + + L
Sbjct: 577 PNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKL 636
Query: 182 FWSMEDNGCPPDAFTCNSYIETLIGSDRLEEAQEVF 289
F SM G PD +T + I++L S R ++A+E+F
Sbjct: 637 FDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIF 672
Score = 64.7 bits (156), Expect = 3e-08
Identities = 34/105 (32%), Positives = 56/105 (53%)
Frame = +2
Query: 2 PDIFSFNALIQSYCRNNQIEKAQRLLISMLTLDLRPDNFTYSAFIKALCGRGRFDEVKVL 181
PDIF+FN+LI C+ ++ E A M+ D+ P+ TY+ I + C G L
Sbjct: 542 PDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHL 601
Query: 182 FWSMEDNGCPPDAFTCNSYIETLIGSDRLEEAQEVFSGYDYLGLQ 316
M+ +G PD F+ N+ I+ G +R ++A+++F LG+Q
Sbjct: 602 LRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQ 646
>ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g16890, mitochondrial-like
[Cucumis sativus]
Length = 688
Score = 101 bits (252), Expect = 3e-19
Identities = 45/86 (52%), Positives = 63/86 (73%)
Frame = +2
Query: 2 PDIFSFNALIQSYCRNNQIEKAQRLLISMLTLDLRPDNFTYSAFIKALCGRGRFDEVKVL 181
PD FSFNALIQ Y N+ +KA++L SML L ++PDN+TY A IK+LC GR D+ + +
Sbjct: 603 PDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREI 662
Query: 182 FWSMEDNGCPPDAFTCNSYIETLIGS 259
F SM++NGC PD++TC+ + +TL S
Sbjct: 663 FLSMKENGCTPDSYTCSLFSDTLAHS 688
Score = 66.2 bits (160), Expect = 1e-08
Identities = 32/96 (33%), Positives = 57/96 (59%)
Frame = +2
Query: 2 PDIFSFNALIQSYCRNNQIEKAQRLLISMLTLDLRPDNFTYSAFIKALCGRGRFDEVKVL 181
P++ ++N LI S+C + ++ LL M ++PD F+++A I+ G+ RF + + L
Sbjct: 568 PNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKL 627
Query: 182 FWSMEDNGCPPDAFTCNSYIETLIGSDRLEEAQEVF 289
F SM G PD +T + I++L S R ++A+E+F
Sbjct: 628 FDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIF 663
Score = 64.7 bits (156), Expect = 3e-08
Identities = 34/105 (32%), Positives = 56/105 (53%)
Frame = +2
Query: 2 PDIFSFNALIQSYCRNNQIEKAQRLLISMLTLDLRPDNFTYSAFIKALCGRGRFDEVKVL 181
PDIF+FN+LI C+ ++ E A M+ D+ P+ TY+ I + C G L
Sbjct: 533 PDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHL 592
Query: 182 FWSMEDNGCPPDAFTCNSYIETLIGSDRLEEAQEVFSGYDYLGLQ 316
M+ +G PD F+ N+ I+ G +R ++A+++F LG+Q
Sbjct: 593 LRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQ 637