BLASTX nr result
ID: Lithospermum22_contig00017004
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00017004
(1650 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285679.1| PREDICTED: probable DNA primase large subuni... 733 0.0
gb|AEL98887.1| DNA primase large subunit, partial [Silene latifo... 701 0.0
gb|AEL98888.1| DNA primase large subunit, partial [Silene latifo... 698 0.0
ref|XP_002303780.1| predicted protein [Populus trichocarpa] gi|2... 695 0.0
ref|NP_001059432.1| Os07g0406800 [Oryza sativa Japonica Group] g... 693 0.0
>ref|XP_002285679.1| PREDICTED: probable DNA primase large subunit [Vitis vinifera]
gi|297741936|emb|CBI33371.3| unnamed protein product
[Vitis vinifera]
Length = 452
Score = 733 bits (1893), Expect = 0.0
Identities = 350/441 (79%), Positives = 409/441 (92%)
Frame = +3
Query: 54 MEIVRSEKKSTSSNEVNADLVTALPLYRAAPELEVRLEDFELYAIDRLQVLRGISDGLSR 233
MEI+RS+++S+ + D+V+ LPLYR+AP L+VRLEDFEL+AIDRL+VL+GISDGLSR
Sbjct: 1 MEIIRSQRRSSKVD----DVVSTLPLYRSAPPLQVRLEDFELFAIDRLRVLKGISDGLSR 56
Query: 234 GRKPEEMEKLVKKLWKAHMRHAHAPEALNKDIISHFVLRLVYCRTEDLRRWFLSMETTLF 413
G+KP+EMEKLV LWKA+MRH A E +NKDIISHFVLRLVYCRTE+LR+WFLSMET LF
Sbjct: 57 GKKPDEMEKLVSDLWKANMRHPQASEFVNKDIISHFVLRLVYCRTEELRKWFLSMETALF 116
Query: 414 RYRFRLETDDVQRELMTEFNLPYKSLSNAEYQTLKDKLSQVARSTGQSLPTADSIFFKVP 593
R+RFRLET + QR L+ EF+ PYK++S+AE++++K+KL QVARS GQSLP+AD+I+FKVP
Sbjct: 117 RHRFRLETPEAQRVLLAEFDHPYKAVSHAEFESVKEKLGQVARSFGQSLPSADAIYFKVP 176
Query: 594 FEEVPELVATRRVYIHKGNAYVAMSQVVSLIVTHFRSYLSKALVLTNRKWTSTIREQEKD 773
FEEVPELVA RRV++ KG+AYVAM+QVVSL+VT FRS+LSKALVLTNRKWTSTIREQEK+
Sbjct: 177 FEEVPELVAGRRVFLQKGHAYVAMNQVVSLVVTQFRSHLSKALVLTNRKWTSTIREQEKE 236
Query: 774 RLTPIVEALSTSYLGPDYSQPSDTTEISLQDIDQLAKTSFPLCMRHLFEKLREDHHLRHG 953
RLTPIVEALSTSYLGPDYSQP + EIS++DIDQ+A +SFPLCMRHLFEKLREDHHL+HG
Sbjct: 237 RLTPIVEALSTSYLGPDYSQPREFVEISIKDIDQVANSSFPLCMRHLFEKLREDHHLKHG 296
Query: 954 GRMQLGLFLKGVGLNLDDALAFWKAEFTRKVGAERFDREYAYAIRHNYGKEGKRTDYTPY 1133
GRMQLGLFLKGVGL LDDALAFWKAEF++KVG+ERFD+EYAY+IRHNYGKEGKRTDYTPY
Sbjct: 297 GRMQLGLFLKGVGLKLDDALAFWKAEFSQKVGSERFDKEYAYSIRHNYGKEGKRTDYTPY 356
Query: 1134 SCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRLGINNRALEEVMVKVQNRHYQLACTL 1313
SCQKIISSTPGVGDHHGCPYRHFSEENLRAALG++G+ NRA+E+VM KV+NRHYQLACTL
Sbjct: 357 SCQKIISSTPGVGDHHGCPYRHFSEENLRAALGKMGVGNRAMEDVMDKVRNRHYQLACTL 416
Query: 1314 TFEAVHGTSCDAGINHPNQYF 1376
TFEAVHG+SCDAGINHPNQYF
Sbjct: 417 TFEAVHGSSCDAGINHPNQYF 437
>gb|AEL98887.1| DNA primase large subunit, partial [Silene latifolia]
Length = 450
Score = 701 bits (1809), Expect = 0.0
Identities = 333/440 (75%), Positives = 397/440 (90%)
Frame = +3
Query: 57 EIVRSEKKSTSSNEVNADLVTALPLYRAAPELEVRLEDFELYAIDRLQVLRGISDGLSRG 236
EIVRS+KKS+S + D+V+ LPLYR+ P+LEVRLEDFEL+AIDRL+VL+GISDGLSRG
Sbjct: 1 EIVRSQKKSSS---IINDVVSDLPLYRSPPQLEVRLEDFELFAIDRLRVLKGISDGLSRG 57
Query: 237 RKPEEMEKLVKKLWKAHMRHAHAPEALNKDIISHFVLRLVYCRTEDLRRWFLSMETTLFR 416
+KP+EME LV LWKAHMRH + E +NKDIISHFVLRLVYCRT++LR WFLSMETTLFR
Sbjct: 58 KKPDEME-LVNDLWKAHMRHPQSSETINKDIISHFVLRLVYCRTDELRNWFLSMETTLFR 116
Query: 417 YRFRLETDDVQRELMTEFNLPYKSLSNAEYQTLKDKLSQVARSTGQSLPTADSIFFKVPF 596
YRF+L++ D QR LM EF LPYK++SNAE++++K+KL+QVARS GQSL + DS+F+KVPF
Sbjct: 117 YRFKLKSLDAQRALMAEFGLPYKAVSNAEFESVKEKLTQVARSMGQSLTSGDSVFYKVPF 176
Query: 597 EEVPELVATRRVYIHKGNAYVAMSQVVSLIVTHFRSYLSKALVLTNRKWTSTIREQEKDR 776
EEVPELVA RRVYIHKG+AYVA+ QVVSL+VT FRS LSKAL+LTNRKWTS I +QEK+R
Sbjct: 177 EEVPELVAGRRVYIHKGHAYVAVHQVVSLVVTQFRSNLSKALILTNRKWTSVISDQEKNR 236
Query: 777 LTPIVEALSTSYLGPDYSQPSDTTEISLQDIDQLAKTSFPLCMRHLFEKLREDHHLRHGG 956
LTPI+EALSTSY+GPDYS+P + E+SL+D+D+LA SFPLCMRHLFEKLREDHHL++GG
Sbjct: 237 LTPIIEALSTSYVGPDYSEPKEYGEVSLKDLDRLANNSFPLCMRHLFEKLREDHHLKYGG 296
Query: 957 RMQLGLFLKGVGLNLDDALAFWKAEFTRKVGAERFDREYAYAIRHNYGKEGKRTDYTPYS 1136
RMQLGLFLKGVGL LDDALAFWK+EF++KVG ERFD+EY+Y+IRH+YGKEGKR DYTPYS
Sbjct: 297 RMQLGLFLKGVGLKLDDALAFWKSEFSKKVGPERFDKEYSYSIRHSYGKEGKRVDYTPYS 356
Query: 1137 CQKIISSTPGVGDHHGCPYRHFSEENLRAALGRLGINNRALEEVMVKVQNRHYQLACTLT 1316
CQK+IS TPGVGDHHGCP+RHFS+ENLRAAL ++G+N+RA +VM KV+NRHYQLACTLT
Sbjct: 357 CQKVISCTPGVGDHHGCPFRHFSDENLRAALNKMGVNSRATVDVMDKVKNRHYQLACTLT 416
Query: 1317 FEAVHGTSCDAGINHPNQYF 1376
FEAVHG +CD+GINHPNQYF
Sbjct: 417 FEAVHGATCDSGINHPNQYF 436
>gb|AEL98888.1| DNA primase large subunit, partial [Silene latifolia]
Length = 450
Score = 698 bits (1802), Expect = 0.0
Identities = 330/440 (75%), Positives = 397/440 (90%)
Frame = +3
Query: 57 EIVRSEKKSTSSNEVNADLVTALPLYRAAPELEVRLEDFELYAIDRLQVLRGISDGLSRG 236
EIVRS+KKS+S + D+V+ LPLYR+ P+LEVRLEDFEL+AIDRL+VL+GISDGLSRG
Sbjct: 1 EIVRSQKKSSS---IINDVVSDLPLYRSPPQLEVRLEDFELFAIDRLRVLKGISDGLSRG 57
Query: 237 RKPEEMEKLVKKLWKAHMRHAHAPEALNKDIISHFVLRLVYCRTEDLRRWFLSMETTLFR 416
+KP+EME LV LWKAHMRH + E +NKDIISHFVLRLVYCRT++LR WFLSMETTLFR
Sbjct: 58 KKPDEME-LVNDLWKAHMRHPQSSETINKDIISHFVLRLVYCRTDELRNWFLSMETTLFR 116
Query: 417 YRFRLETDDVQRELMTEFNLPYKSLSNAEYQTLKDKLSQVARSTGQSLPTADSIFFKVPF 596
YRF+L++ D QR LM EF LPYK++SNAE++++K+KL+QVARS GQSL + DS+F+KVPF
Sbjct: 117 YRFKLKSLDAQRALMAEFGLPYKAVSNAEFESVKEKLTQVARSMGQSLTSGDSVFYKVPF 176
Query: 597 EEVPELVATRRVYIHKGNAYVAMSQVVSLIVTHFRSYLSKALVLTNRKWTSTIREQEKDR 776
EEVPELVA RRVYIHKG+AYVA+ QVVSL+VT FRS LSKAL+LTNRKWTS I +QEK+R
Sbjct: 177 EEVPELVAGRRVYIHKGHAYVAVHQVVSLVVTQFRSNLSKALILTNRKWTSVISDQEKNR 236
Query: 777 LTPIVEALSTSYLGPDYSQPSDTTEISLQDIDQLAKTSFPLCMRHLFEKLREDHHLRHGG 956
LTPI+EALSTSY+GPDYS+P + E+SL+D+D+LA SFPLCMRHLFEKLREDHHL++GG
Sbjct: 237 LTPIIEALSTSYVGPDYSEPKEYGEVSLKDLDRLANNSFPLCMRHLFEKLREDHHLKYGG 296
Query: 957 RMQLGLFLKGVGLNLDDALAFWKAEFTRKVGAERFDREYAYAIRHNYGKEGKRTDYTPYS 1136
RMQLGLFLKGVGL LDDALAFW++EF++K+G ERFD+EY+Y+IRH+YGKEGKR DYTPYS
Sbjct: 297 RMQLGLFLKGVGLKLDDALAFWRSEFSKKLGPERFDKEYSYSIRHSYGKEGKRVDYTPYS 356
Query: 1137 CQKIISSTPGVGDHHGCPYRHFSEENLRAALGRLGINNRALEEVMVKVQNRHYQLACTLT 1316
CQK+IS TPGVGDHHGCP+RHFS+ENLRAA ++G+N+RA+ +VM KV+NRHYQLACTLT
Sbjct: 357 CQKVISCTPGVGDHHGCPFRHFSDENLRAAFNKMGVNSRAMVDVMDKVKNRHYQLACTLT 416
Query: 1317 FEAVHGTSCDAGINHPNQYF 1376
FEAVHG +CD+GINHPNQYF
Sbjct: 417 FEAVHGATCDSGINHPNQYF 436
>ref|XP_002303780.1| predicted protein [Populus trichocarpa] gi|222841212|gb|EEE78759.1|
predicted protein [Populus trichocarpa]
Length = 453
Score = 695 bits (1793), Expect = 0.0
Identities = 342/444 (77%), Positives = 390/444 (87%), Gaps = 3/444 (0%)
Frame = +3
Query: 54 MEIVRSE--KKSTSSNEVNADLVTALPLYRAAPELEVRLEDFELYAIDRLQVLRGISDGL 227
MEIV+ + K S+N D+V+ LPLYR+AP LEVRLEDFELYAIDRL+VL+G+SDGL
Sbjct: 1 MEIVKPQWKKPPPSAN----DVVSTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGVSDGL 56
Query: 228 SRGRKPEEMEKLVKKLWKAHMRHAHAPEALNKDIISHFVLRLVYCRTEDLRRWFLSMETT 407
SRG++PEEMEKLV LWKA+MRH E NKDIISHFVLRLVYCRTE+LR+WFLS E
Sbjct: 57 SRGKRPEEMEKLVNDLWKANMRHPLPSEVTNKDIISHFVLRLVYCRTEELRKWFLSNEIA 116
Query: 408 LFRYRFRLETDDVQRELMTEFNLPYKSLSNAEYQTLKDKLSQVARSTGQSLPTA-DSIFF 584
LFRYRFRL + + QR LM EF+LPYK ++ AE++ +K+KL VARSTGQ PTA D+IF+
Sbjct: 117 LFRYRFRLLSPEAQRLLMAEFDLPYKPVTTAEFEGVKEKLHLVARSTGQLKPTASDAIFY 176
Query: 585 KVPFEEVPELVATRRVYIHKGNAYVAMSQVVSLIVTHFRSYLSKALVLTNRKWTSTIREQ 764
KVPFEEVPELVA RRV+I KG AYVAM+QVVSL+VT FR LSKALVLTNRKWTSTIREQ
Sbjct: 177 KVPFEEVPELVAGRRVFICKGYAYVAMNQVVSLVVTQFRGLLSKALVLTNRKWTSTIREQ 236
Query: 765 EKDRLTPIVEALSTSYLGPDYSQPSDTTEISLQDIDQLAKTSFPLCMRHLFEKLREDHHL 944
EKDRLTPIVE L TSYLGPDYSQP + E+S++DIDQ+AK+SFPLCMRHLFEKLREDHHL
Sbjct: 237 EKDRLTPIVETLCTSYLGPDYSQPKEFAEVSIKDIDQVAKSSFPLCMRHLFEKLREDHHL 296
Query: 945 RHGGRMQLGLFLKGVGLNLDDALAFWKAEFTRKVGAERFDREYAYAIRHNYGKEGKRTDY 1124
+HGGRMQLGLFLKGVGL LDDALAFWKAEF++KVGAERFD+EYAY+IRHNYG+EGKRTDY
Sbjct: 297 KHGGRMQLGLFLKGVGLKLDDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGREGKRTDY 356
Query: 1125 TPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRLGINNRALEEVMVKVQNRHYQLA 1304
TPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAAL R+G+N+ +E VM KV+NRHYQLA
Sbjct: 357 TPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALSRMGVNSGEMENVMDKVRNRHYQLA 416
Query: 1305 CTLTFEAVHGTSCDAGINHPNQYF 1376
CTLTFE++HG+S DAGINHPNQYF
Sbjct: 417 CTLTFESIHGSSYDAGINHPNQYF 440
>ref|NP_001059432.1| Os07g0406800 [Oryza sativa Japonica Group]
gi|50510201|dbj|BAD31369.1| putative DNA primase large
subunit [Oryza sativa Japonica Group]
gi|50510256|dbj|BAD31461.1| putative DNA primase large
subunit [Oryza sativa Japonica Group]
gi|113610968|dbj|BAF21346.1| Os07g0406800 [Oryza sativa
Japonica Group] gi|215678806|dbj|BAG95243.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222636872|gb|EEE67004.1| hypothetical protein
OsJ_23920 [Oryza sativa Japonica Group]
Length = 463
Score = 693 bits (1788), Expect = 0.0
Identities = 332/444 (74%), Positives = 386/444 (86%), Gaps = 3/444 (0%)
Frame = +3
Query: 54 MEIVRSEKKSTSSNEVNADL---VTALPLYRAAPELEVRLEDFELYAIDRLQVLRGISDG 224
MEIVRS ++ + LP YR AP+LEVRLE+FEL+AIDRL+VL+GI+DG
Sbjct: 1 MEIVRSHRQIAAEAAAGVGCGGGAGGLPTYRVAPQLEVRLEEFELFAIDRLRVLKGIADG 60
Query: 225 LSRGRKPEEMEKLVKKLWKAHMRHAHAPEALNKDIISHFVLRLVYCRTEDLRRWFLSMET 404
LSRG++PEEMEKLVK+LWKAHMRH E LNKDIISHFVLRLVYCRTE+LR+WFLSMET
Sbjct: 61 LSRGKRPEEMEKLVKELWKAHMRHQDPTETLNKDIISHFVLRLVYCRTEELRKWFLSMET 120
Query: 405 TLFRYRFRLETDDVQRELMTEFNLPYKSLSNAEYQTLKDKLSQVARSTGQSLPTADSIFF 584
TLFRYRFRLE+ + QR LM+EF LPYK+L ++E++ +KDKLSQVAR+ GQS +S+FF
Sbjct: 121 TLFRYRFRLESPESQRMLMSEFRLPYKALPHSEFEAVKDKLSQVARTIGQSA-AVESVFF 179
Query: 585 KVPFEEVPELVATRRVYIHKGNAYVAMSQVVSLIVTHFRSYLSKALVLTNRKWTSTIREQ 764
KVPFEEVP+LVA+RRV++ KG AYVAMSQVVSL+VT FR +SKALVLTNRKWT+TI+EQ
Sbjct: 180 KVPFEEVPDLVASRRVFLSKGYAYVAMSQVVSLVVTQFRCNISKALVLTNRKWTATIKEQ 239
Query: 765 EKDRLTPIVEALSTSYLGPDYSQPSDTTEISLQDIDQLAKTSFPLCMRHLFEKLREDHHL 944
EKDRLTPIVEALS +Y GPDYSQP D EISL+DIDQLAKTSFPLCMRH+ EKLRE+HHL
Sbjct: 240 EKDRLTPIVEALSNAYFGPDYSQPKDAVEISLKDIDQLAKTSFPLCMRHMLEKLRENHHL 299
Query: 945 RHGGRMQLGLFLKGVGLNLDDALAFWKAEFTRKVGAERFDREYAYAIRHNYGKEGKRTDY 1124
+HGGRMQ GLFLKG GL L+DALAFW+AEF++KVG+ERFD+EYAY+IRHNYGKEGKRTDY
Sbjct: 300 KHGGRMQFGLFLKGAGLKLEDALAFWRAEFSQKVGSERFDKEYAYSIRHNYGKEGKRTDY 359
Query: 1125 TPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRLGINNRALEEVMVKVQNRHYQLA 1304
TPYSCQKIIS+TPGVGDHHGCPYRHF E+NLRAAL ++GI+ LEE+M KV+NRHYQLA
Sbjct: 360 TPYSCQKIISATPGVGDHHGCPYRHFGEDNLRAALNKMGISGHPLEEIMDKVKNRHYQLA 419
Query: 1305 CTLTFEAVHGTSCDAGINHPNQYF 1376
CT+TFEA HG SCD GINHPNQYF
Sbjct: 420 CTMTFEAEHGVSCDTGINHPNQYF 443