BLASTX nr result

ID: Lithospermum22_contig00016985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016985
         (1202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271014.1| PREDICTED: nuclear speckle splicing regulato...   271   2e-70
ref|XP_002523868.1| Coiled-coil domain-containing protein, putat...   249   7e-64
ref|XP_002312825.1| predicted protein [Populus trichocarpa] gi|2...   245   1e-62
ref|XP_004152856.1| PREDICTED: nuclear speckle splicing regulato...   244   2e-62
ref|NP_565644.1| Coiled-coil domain-containing protein 55 (DUF20...   233   6e-59

>ref|XP_002271014.1| PREDICTED: nuclear speckle splicing regulatory protein 1 [Vitis
            vinifera] gi|147866225|emb|CAN79937.1| hypothetical
            protein VITISV_027776 [Vitis vinifera]
          Length = 300

 Score =  271 bits (693), Expect = 2e-70
 Identities = 151/302 (50%), Positives = 196/302 (64%), Gaps = 5/302 (1%)
 Frame = -1

Query: 1139 KRYGLQLRVXXXXXXXXXXXXPIAATSAFRXXXXXDVEREISRQAYKNKTNKDVEEQHKK 960
            K+YGLQLRV            P+     F      D+EREISRQA KNKT KD+EEQHKK
Sbjct: 2    KKYGLQLRVPPSQQKKQPTRPPLPPPLGFCDENEDDIEREISRQASKNKTLKDIEEQHKK 61

Query: 959  TLEEDPTAFDYDGVYDDMKQQAIMPRVQEREERKSKYIQTLMEKAKLXXXXXEVVYEKKL 780
             LEEDPTAFDYD VY++MK++ I P  Q+R+ERK KYIQ L+EKAK      E++YEKKL
Sbjct: 62   ALEEDPTAFDYDDVYEEMKEKTIRPLAQDRQERKPKYIQKLIEKAKQREREHEIIYEKKL 121

Query: 779  AKERTQEDHLYADKDKFVTGAYKRKLAEQAKWLQXXXXXXXXXXRDDVTKKTDITDFYFS 600
             KER+++D LYADKDKF+TGAYK+KLAEQAKWL+          +DDVTKK+D++DFY++
Sbjct: 122  VKERSKDDALYADKDKFITGAYKKKLAEQAKWLEEERLRELREEKDDVTKKSDLSDFYYN 181

Query: 599  LSKNVAFGGGTSQVNKSEKPNVEPEVQSPEKVGASNKEDTNVSPMSK-----RXXXXXXX 435
            LSKNVAFGG  +++ K E+   + +  + EK  +S    T+ S +++             
Sbjct: 182  LSKNVAFGGIEAKLRKREE---KVDADTSEKGSSSTNTHTDSSVINEGHEGHEGHEGKTS 238

Query: 434  XXXXXXXXXXDVHPVSDISKPEEETNATTAIEQPKPNHHKKNEDALAAAKERFLARKKAK 255
                      D+ PVSD S  E+     T  +QPK +HHK++EDA+AAAKERFLARK+AK
Sbjct: 239  TPSKESSQSLDIKPVSDASAQEKALAEETLAQQPKSDHHKRSEDAVAAAKERFLARKRAK 298

Query: 254  FQ 249
             Q
Sbjct: 299  QQ 300


>ref|XP_002523868.1| Coiled-coil domain-containing protein, putative [Ricinus communis]
            gi|223536956|gb|EEF38594.1| Coiled-coil domain-containing
            protein, putative [Ricinus communis]
          Length = 327

 Score =  249 bits (637), Expect = 7e-64
 Identities = 140/282 (49%), Positives = 176/282 (62%), Gaps = 20/282 (7%)
 Frame = -1

Query: 1031 VEREISRQAYKNKTNKDVEEQHKKTLEEDPTAFDYDGVYDDMKQQAIMPRVQEREERKSK 852
            VE+EISR A KNK+ KD+EE HKK LEEDP+AFDYDGVYDDMKQ+   PR Q+R+ERK K
Sbjct: 49   VEKEISRHASKNKSLKDIEEMHKKALEEDPSAFDYDGVYDDMKQKVAQPRHQDRQERKPK 108

Query: 851  YIQTLMEKAKLXXXXXEVVYEKKLAKERTQEDHLYADKDKFVTGAYKRKLAEQAKWLQXX 672
            YI+ LM+KA++     E++YEKKL KERT++DHLYADKDKFVT AYK+KLAEQAKW++  
Sbjct: 109  YIEALMKKAEIRQREHEIIYEKKLTKERTKDDHLYADKDKFVTSAYKKKLAEQAKWMEEE 168

Query: 671  XXXXXXXXRDDVTKKTDITDFYFSLSKNVAFGGGTSQVNKSEKPNVEPEVQSPEKV---- 504
                    +DDVTKK+D++DFYF+L KNVAFG       K EK   + E++  EK+    
Sbjct: 169  RLRQLKEEKDDVTKKSDLSDFYFNLGKNVAFGAKEIDSRKQEK---QTELRKSEKLDDEA 225

Query: 503  -------GASNKEDTNVSPMSK-----RXXXXXXXXXXXXXXXXXDVHPVS----DISKP 372
                   G    +  ++   S+                       DV+PVS    D S  
Sbjct: 226  AGSTSGRGRPLPDSKSIMESSRVNEEHHDGTSPVPILPRRNSESSDVNPVSERKVDTSVQ 285

Query: 371  EEETNATTAIEQPKPNHHKKNEDALAAAKERFLARKKAKFQM 246
            E          QPK +HHK+NED +AAAKERFLARKKAK Q+
Sbjct: 286  ENTATEEPLANQPKQDHHKRNEDTVAAAKERFLARKKAKQQL 327


>ref|XP_002312825.1| predicted protein [Populus trichocarpa] gi|222849233|gb|EEE86780.1|
            predicted protein [Populus trichocarpa]
          Length = 321

 Score =  245 bits (626), Expect = 1e-62
 Identities = 138/282 (48%), Positives = 177/282 (62%), Gaps = 21/282 (7%)
 Frame = -1

Query: 1031 VEREISRQAYKNKTNKDVEEQHKKTLEEDPTAFDYDGVYDDMKQQAIMPRVQEREERKSK 852
            VE+EISRQA KNK+ KD+EEQHKK LEEDP+ FDYDGVYD+MKQ+   P+  +R++R+SK
Sbjct: 35   VEKEISRQAAKNKSLKDIEEQHKKALEEDPSVFDYDGVYDEMKQKIAQPKALDRQKRESK 94

Query: 851  YIQTLMEKAKLXXXXXEVVYEKKLAKERTQEDHLYADKDKFVTGAYKRKLAEQAKWLQXX 672
            YI+TLM KA+      +V++EK LAKER++EDHL+ADKDKFVT AYKRKLAEQ KW++  
Sbjct: 95   YIKTLMGKAEERKRQHDVIFEKNLAKERSKEDHLFADKDKFVTAAYKRKLAEQEKWMEEE 154

Query: 671  XXXXXXXXRDDVTKKTDITDFYFSLSKNVAFGGGTSQVNKSEKPNVEPEVQSPEKVG--- 501
                    ++DVTKK+D++DFYF+L KNVA G       K EK + + E + PEK     
Sbjct: 155  RLRELREEKEDVTKKSDLSDFYFNLGKNVALGAKDLLSKKQEKQDKQTEFRKPEKPYDKV 214

Query: 500  ASNKEDTN---------VSPMSKRXXXXXXXXXXXXXXXXXDVHPVSD---------ISK 375
            A    D N         +   S +                 D  PVSD         +  
Sbjct: 215  AGETSDGNHALTDSKFELDSSSVKEAHQKETSPPRRSSEPLDPEPVSDKPISGTSTEVKN 274

Query: 374  PEEETNATTAIEQPKPNHHKKNEDALAAAKERFLARKKAKFQ 249
            P E+++A     QP P+HHK+N+DALAAAKERFLARKKAK Q
Sbjct: 275  PAEQSSAN----QPNPDHHKRNQDALAAAKERFLARKKAKQQ 312


>ref|XP_004152856.1| PREDICTED: nuclear speckle splicing regulatory protein 1-like
            [Cucumis sativus] gi|449520024|ref|XP_004167034.1|
            PREDICTED: nuclear speckle splicing regulatory protein
            1-like [Cucumis sativus]
          Length = 322

 Score =  244 bits (624), Expect = 2e-62
 Identities = 148/322 (45%), Positives = 188/322 (58%), Gaps = 28/322 (8%)
 Frame = -1

Query: 1136 RYGLQLRVXXXXXXXXXXXXPIAATSAFRXXXXXDVEREISRQAYKNKTNKDVEEQHKKT 957
            +YGLQLRV             + A   F+     DVEREISRQA KNK  KD+EEQHKK 
Sbjct: 3    KYGLQLRVKPSQQKQPTRPP-LPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKKA 61

Query: 956  LEEDPTAFDYDGVYDDMKQQAIMPRVQEREERKSKYIQTLMEKAKLXXXXXEVVYEKKLA 777
            LEEDP+ FDYDGVYD+MK++ + PR  +REERK KYIQ LM+KA+      E++YE+KLA
Sbjct: 62   LEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKLA 121

Query: 776  KERTQEDHLYADKDKFVTGAYKRKLAEQAKWLQXXXXXXXXXXRDDVTKKTDITDFYFSL 597
            KER+++DHLYA KDKFVTGAYK+KLAEQAKW++          ++DVTKK+D++DFYFSL
Sbjct: 122  KERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFSL 181

Query: 596  SKNVAFGGGTS----------QVNKSEKPNVEPEVQSPEKVGASNKEDT---------NV 474
             KNVA+G   +          Q+ K EK   + EV   EK   S   DT         N+
Sbjct: 182  QKNVAYGARNAIEPTAPPKKLQLEKKEK---QTEVHILEKHEESCNGDTFNDHLLQNSNL 238

Query: 473  SPMSKRXXXXXXXXXXXXXXXXXDVHPVSDISKPEEETNATTAIEQ---------PKPNH 321
               S++                       + + P    + T   EQ         PK +H
Sbjct: 239  PSCSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDH 298

Query: 320  HKKNEDALAAAKERFLARKKAK 255
            HK+NEDA+AAAKERFLARK+AK
Sbjct: 299  HKRNEDAVAAAKERFLARKRAK 320


>ref|NP_565644.1| Coiled-coil domain-containing protein 55 (DUF2040) [Arabidopsis
            thaliana] gi|20197674|gb|AAM15195.1| Expressed protein
            [Arabidopsis thaliana] gi|21553752|gb|AAM62845.1| unknown
            [Arabidopsis thaliana] gi|26452543|dbj|BAC43356.1|
            unknown protein [Arabidopsis thaliana]
            gi|28973091|gb|AAO63870.1| unknown protein [Arabidopsis
            thaliana] gi|51968604|dbj|BAD42994.1| unknown protein
            [Arabidopsis thaliana] gi|51968616|dbj|BAD43000.1|
            unknown protein [Arabidopsis thaliana]
            gi|330252874|gb|AEC07968.1| Coiled-coil domain-containing
            protein 55 (DUF2040) [Arabidopsis thaliana]
          Length = 323

 Score =  233 bits (595), Expect = 6e-59
 Identities = 141/317 (44%), Positives = 185/317 (58%), Gaps = 20/317 (6%)
 Frame = -1

Query: 1139 KRYGLQLRVXXXXXXXXXXXXPIAATSAFRXXXXXDVEREISRQAYKNKTNKDVEEQHKK 960
            K+YGLQ+R              +   S F      DVE+EISRQA K K +K++EEQHKK
Sbjct: 2    KKYGLQIRAPSQKKQSSSRPP-LRPASIFDEEEDHDVEKEISRQATKTKAHKEIEEQHKK 60

Query: 959  TLEEDPTAFDYDGVYDDMKQQAIMPRVQEREERKSKYIQTLMEKAKLXXXXXEVVYEKKL 780
             LEEDP+AF YD VYDDMKQ+A++PR+Q+REERK +YIQ LM++A+      E+VYE+KL
Sbjct: 61   ALEEDPSAFSYDEVYDDMKQKAVLPRMQDREERKPRYIQNLMKQAERREKEHEIVYERKL 120

Query: 779  AKERTQEDHLYADKDKFVTGAYKRKLAEQAKWLQXXXXXXXXXXRDDVTKKTDITDFYFS 600
            AKER +++HL++DK+KFVTGAYKRKL EQ KWL           RDDVTKK D++DFYF+
Sbjct: 121  AKEREKDEHLFSDKEKFVTGAYKRKLEEQKKWLAEERLRELREERDDVTKKKDLSDFYFN 180

Query: 599  LSKNVAFGGGTSQVNKSEKPNVE------PEVQSPEKVGASNKEDTNVSPMSKR-XXXXX 441
            + KNVAFG    +  ++EK   +       E +  EK+    KE T V    K       
Sbjct: 181  IGKNVAFGAREVEAKEAEKLEEQRKAEKLEEQRKAEKLEELRKEVTRVEKKRKSPEKEVS 240

Query: 440  XXXXXXXXXXXXDVHPV------------SDISKPEEETNATTAIEQPKP-NHHKKNEDA 300
                         + P+            SD ++  + +    A E PK  N  K+ EDA
Sbjct: 241  PDSGEFGSSRSKSLEPLEAEQAVSEKEMGSDGTEERKSSIKEAAKEVPKAINDQKRREDA 300

Query: 299  LAAAKERFLARKKAKFQ 249
            +AAAKERFLARKKAK +
Sbjct: 301  IAAAKERFLARKKAKIE 317


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