BLASTX nr result

ID: Lithospermum22_contig00016975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016975
         (1046 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278571.1| PREDICTED: small RNA degrading nuclease 5-li...   383   e-104
emb|CBI19949.3| unnamed protein product [Vitis vinifera]              372   e-100
ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|2235...   371   e-100
ref|XP_003541832.1| PREDICTED: small RNA degrading nuclease 5-li...   360   3e-97
ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-li...   359   7e-97

>ref|XP_002278571.1| PREDICTED: small RNA degrading nuclease 5-like [Vitis vinifera]
          Length = 572

 Score =  383 bits (984), Expect = e-104
 Identities = 197/277 (71%), Positives = 228/277 (82%)
 Frame = +3

Query: 3    LVGHSLENDLLALKICHELVIDTAVLYKHPKGRSYKTALRVLTRKFLFREIQDSGNGHDS 182
            LVGHSLENDLLALKI H+LVIDTAVLYKHP+G SYKTALRVLTR+FL REIQ+S NGHDS
Sbjct: 296  LVGHSLENDLLALKISHDLVIDTAVLYKHPRGASYKTALRVLTRRFLSREIQESRNGHDS 355

Query: 183  VEDARATLELALLKIRHGPEFGSPPSFARXXXXXXXXXXXXXXXIVDDIAIVKRYASESS 362
            +EDARA +ELALLKIRHGPEFGSPPSF R                +DDI+IV+RY SE+S
Sbjct: 356  IEDARAAMELALLKIRHGPEFGSPPSFMRKKLLTVLNDYGKTSSFIDDISIVRRYTSEAS 415

Query: 363  NAIPVSSDDEALLKAMKEVRNENLHFVWSQFSELYSYFEKQAKDEEKLNAKLAEMISLLT 542
            +A PVSSD EAL KA KEV+N+ +HFVW+QFSEL SYF+KQA+D +KLNAKLAEMISLLT
Sbjct: 416  HAFPVSSDVEALSKAKKEVKNDKVHFVWTQFSELNSYFKKQAEDTDKLNAKLAEMISLLT 475

Query: 543  CSNNKSNGRKSIRNNLTSELKDVLSHINGKIRSLHSSLPPNAMIIVCTGHGDTAIVQRLR 722
            C N KS   K I+ ++TSELKD+L+ I+ +IRSL+  LP N M+I+CTGHGDTAIV RLR
Sbjct: 476  C-NKKSTTPKGIKFSVTSELKDILTCIDTRIRSLYHELPANTMLIICTGHGDTAIVHRLR 534

Query: 723  NMLSEQSETALSRDKLVKVLEELQAQAEVGLCFVGIK 833
             ML EQ ET +SR+KLVKVLEELQAQAEV LCFVG+K
Sbjct: 535  KMLREQIETTVSREKLVKVLEELQAQAEVALCFVGVK 571


>emb|CBI19949.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  372 bits (954), Expect = e-100
 Identities = 192/277 (69%), Positives = 225/277 (81%)
 Frame = +3

Query: 3    LVGHSLENDLLALKICHELVIDTAVLYKHPKGRSYKTALRVLTRKFLFREIQDSGNGHDS 182
            LVGHSLENDLLALKI H+LVIDTAVLYKHP+G SYKTALRVLTR+FL REIQ+S NGHDS
Sbjct: 296  LVGHSLENDLLALKISHDLVIDTAVLYKHPRGASYKTALRVLTRRFLSREIQESRNGHDS 355

Query: 183  VEDARATLELALLKIRHGPEFGSPPSFARXXXXXXXXXXXXXXXIVDDIAIVKRYASESS 362
            +EDARA +ELAL   ++GPEFGSPPSF R                +DDI+IV+RY SE+S
Sbjct: 356  IEDARAAMELALEVEKYGPEFGSPPSFMRKKLLTVLNDYGKTSSFIDDISIVRRYTSEAS 415

Query: 363  NAIPVSSDDEALLKAMKEVRNENLHFVWSQFSELYSYFEKQAKDEEKLNAKLAEMISLLT 542
            +A PVSSD EAL KA KEV+N+ +HFVW+QFSEL SYF+KQA+D +KLNAKLAEMISLLT
Sbjct: 416  HAFPVSSDVEALSKAKKEVKNDKVHFVWTQFSELNSYFKKQAEDTDKLNAKLAEMISLLT 475

Query: 543  CSNNKSNGRKSIRNNLTSELKDVLSHINGKIRSLHSSLPPNAMIIVCTGHGDTAIVQRLR 722
            C N KS   K I+ ++TSELKD+L+ I+ +IRSL+  LP N M+I+CTGHGDTAIV RLR
Sbjct: 476  C-NKKSTTPKGIKFSVTSELKDILTCIDTRIRSLYHELPANTMLIICTGHGDTAIVHRLR 534

Query: 723  NMLSEQSETALSRDKLVKVLEELQAQAEVGLCFVGIK 833
             ML EQ ET +SR+KLVKVLEELQAQAEV LCFVG+K
Sbjct: 535  KMLREQIETTVSREKLVKVLEELQAQAEVALCFVGVK 571


>ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|223540467|gb|EEF42034.1|
            rnase h, putative [Ricinus communis]
          Length = 572

 Score =  371 bits (952), Expect = e-100
 Identities = 184/277 (66%), Positives = 227/277 (81%)
 Frame = +3

Query: 3    LVGHSLENDLLALKICHELVIDTAVLYKHPKGRSYKTALRVLTRKFLFREIQDSGNGHDS 182
            L+GHSLENDL ALKI H LVIDTAVLYKHP+G SYKTALRVL +KFL REIQ SG+GHDS
Sbjct: 296  LIGHSLENDLSALKISHGLVIDTAVLYKHPRGGSYKTALRVLAKKFLSREIQQSGDGHDS 355

Query: 183  VEDARATLELALLKIRHGPEFGSPPSFARXXXXXXXXXXXXXXXIVDDIAIVKRYASESS 362
            +EDARA +ELALLKI++GP+FGSPPSF R               ++DD++IVKRYASESS
Sbjct: 356  IEDARAAMELALLKIKNGPDFGSPPSFVRRKLLTILSESGKASSVIDDVSIVKRYASESS 415

Query: 363  NAIPVSSDDEALLKAMKEVRNENLHFVWSQFSELYSYFEKQAKDEEKLNAKLAEMISLLT 542
            +A PVSSDD+AL KA+KEV+N+ +HFVW+Q SEL SYF+KQA DE K+NAKLAEMISLLT
Sbjct: 416  HAFPVSSDDDALSKALKEVKNDRVHFVWTQLSELNSYFKKQADDEGKVNAKLAEMISLLT 475

Query: 543  CSNNKSNGRKSIRNNLTSELKDVLSHINGKIRSLHSSLPPNAMIIVCTGHGDTAIVQRLR 722
            C   KS   K +R ++TSELK++L  ++ ++R L+S+LP N M+I+CTGHGDTAIV+RLR
Sbjct: 476  C-QKKSANTKGVRCSMTSELKEILIRMDARVRCLYSALPTNTMLIICTGHGDTAIVRRLR 534

Query: 723  NMLSEQSETALSRDKLVKVLEELQAQAEVGLCFVGIK 833
             +L+E+ ET + R+K+VKVLEELQAQAEV LCFVG+K
Sbjct: 535  KLLTEKQETRICREKIVKVLEELQAQAEVALCFVGVK 571


>ref|XP_003541832.1| PREDICTED: small RNA degrading nuclease 5-like [Glycine max]
          Length = 576

 Score =  360 bits (924), Expect = 3e-97
 Identities = 176/277 (63%), Positives = 227/277 (81%)
 Frame = +3

Query: 3    LVGHSLENDLLALKICHELVIDTAVLYKHPKGRSYKTALRVLTRKFLFREIQDSGNGHDS 182
            LVGHSLENDLLAL I H+ VIDTAVLYKHP+G S+K ALR LT++FL REIQ SGNGHDS
Sbjct: 300  LVGHSLENDLLALNISHDSVIDTAVLYKHPRGSSHKNALRFLTKRFLSREIQQSGNGHDS 359

Query: 183  VEDARATLELALLKIRHGPEFGSPPSFARXXXXXXXXXXXXXXXIVDDIAIVKRYASESS 362
            +EDARAT+ELALLKIR+GP+FGSPPSF R               ++DDI++VKRYASESS
Sbjct: 360  IEDARATMELALLKIRNGPDFGSPPSFTRKKLLSILSESGKISSLIDDISVVKRYASESS 419

Query: 363  NAIPVSSDDEALLKAMKEVRNENLHFVWSQFSELYSYFEKQAKDEEKLNAKLAEMISLLT 542
            +AIPV+SDD AL KA KEV+NE +HF+W+QFSEL+SY +KQA+D E LN +LAEMI++ T
Sbjct: 420  HAIPVTSDDVALAKANKEVKNEKVHFIWTQFSELHSYLKKQAEDSESLNKRLAEMIAIKT 479

Query: 543  CSNNKSNGRKSIRNNLTSELKDVLSHINGKIRSLHSSLPPNAMIIVCTGHGDTAIVQRLR 722
            C NN + G K  + N ++ELK++L+ ++ +I +L+ SLP NAM+I+CTGHGDTAIV+RLR
Sbjct: 480  CQNNFAKG-KGFKLNASAELKEILARMDARIHNLYLSLPTNAMMIICTGHGDTAIVRRLR 538

Query: 723  NMLSEQSETALSRDKLVKVLEELQAQAEVGLCFVGIK 833
             ML+EQ+E+ L R+++V++LEE+QA+AEV LCFVG+K
Sbjct: 539  KMLTEQNESNLCREEIVEILEEVQARAEVALCFVGVK 575


>ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-like [Glycine max]
          Length = 567

 Score =  359 bits (921), Expect = 7e-97
 Identities = 175/277 (63%), Positives = 227/277 (81%)
 Frame = +3

Query: 3    LVGHSLENDLLALKICHELVIDTAVLYKHPKGRSYKTALRVLTRKFLFREIQDSGNGHDS 182
            LVGHSLENDLLALKI H+LVIDTAVLYKHP+G ++K ALR LT++FL REIQ SGNGHDS
Sbjct: 291  LVGHSLENDLLALKISHDLVIDTAVLYKHPRGSTHKNALRFLTKRFLSREIQQSGNGHDS 350

Query: 183  VEDARATLELALLKIRHGPEFGSPPSFARXXXXXXXXXXXXXXXIVDDIAIVKRYASESS 362
            +EDARAT+ELALLKIR+GP FGSPPSF R               ++DDI++VKRYASESS
Sbjct: 351  IEDARATMELALLKIRNGPNFGSPPSFTRKKLLSILSESGKTSSLIDDISVVKRYASESS 410

Query: 363  NAIPVSSDDEALLKAMKEVRNENLHFVWSQFSELYSYFEKQAKDEEKLNAKLAEMISLLT 542
            +AIPV+SDD AL KA KEV+N  +HF+W+QFSEL+SY +KQA+D E+LN +LAEM++L T
Sbjct: 411  HAIPVTSDDVALAKANKEVKNGKVHFIWTQFSELHSYLKKQAEDSERLNRRLAEMLALQT 470

Query: 543  CSNNKSNGRKSIRNNLTSELKDVLSHINGKIRSLHSSLPPNAMIIVCTGHGDTAIVQRLR 722
            C NN + G K  +   ++ELK++L+ ++ +I +L+ SLP NAM+I+CTGHGDTAIV+RLR
Sbjct: 471  CQNNFTKG-KDFKLKASAELKEILARMDARIHNLYLSLPTNAMMIICTGHGDTAIVRRLR 529

Query: 723  NMLSEQSETALSRDKLVKVLEELQAQAEVGLCFVGIK 833
             ML+EQ+E+ + R+K+V++LEE+QA+AEV LCFVG+K
Sbjct: 530  KMLAEQNESNICREKIVEILEEVQARAEVALCFVGVK 566


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