BLASTX nr result

ID: Lithospermum22_contig00016964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016964
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308141.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
ref|XP_002331387.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
dbj|BAF48663.1| leucine-rich repeat/extensin [Nicotiana plumbagi...   117   1e-24
dbj|BAF48665.1| leucine-rich repeat/extensin 1 [Nicotiana tabacum]    115   4e-24
ref|XP_002514492.1| LRX2, putative [Ricinus communis] gi|2235463...   113   1e-23

>ref|XP_002308141.1| predicted protein [Populus trichocarpa] gi|222854117|gb|EEE91664.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/111 (57%), Positives = 75/111 (67%), Gaps = 13/111 (11%)
 Frame = -2

Query: 385 FTGVIPSNVCQLPSLQNFTYSFNYFTGEAPSCAAAFRPGGNAVSNSIQNCIPGKNDQKSA 206
           FTG IP++VCQLP+LQNFT+SFNYFTGEAPSCAA    GG  VSN  QNCIPGK +Q+SA
Sbjct: 300 FTGAIPASVCQLPNLQNFTFSFNYFTGEAPSCAAI---GG--VSNGTQNCIPGKTNQRSA 354

Query: 205 KQCSSEAAKPYDCRKSACF-------------VNPTPPTKVAPPSHGSTPP 92
           KQCSSEAA+P DC K  C               +P PP +  PP++   PP
Sbjct: 355 KQCSSEAARPVDCSKFKCVSPRTHLPPPPPPPPSPPPPVEQQPPTYHHIPP 405


>ref|XP_002331387.1| predicted protein [Populus trichocarpa] gi|222873601|gb|EEF10732.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score =  119 bits (298), Expect = 3e-25
 Identities = 63/108 (58%), Positives = 72/108 (66%), Gaps = 5/108 (4%)
 Frame = -2

Query: 385 FTGVIPSNVCQLPSLQNFTYSFNYFTGEAPSCAAAFRPGGNAVSNSIQNCIPGKNDQKSA 206
           FTGV+P++V QLP+LQNFTYSFNYFTGEAPSCAA       AVSN  QNCIPGK +Q+SA
Sbjct: 299 FTGVVPASVYQLPNLQNFTYSFNYFTGEAPSCAAI-----GAVSNGTQNCIPGKMNQRSA 353

Query: 205 KQCSSEAAKPYDCRKSAC-----FVNPTPPTKVAPPSHGSTPPSQGSS 77
           KQCSSEAA+P DC K  C       +P PP+          PPS   S
Sbjct: 354 KQCSSEAARPIDCSKFKCGGSGGASSPPPPSIGCIIPESPPPPSPAPS 401


>dbj|BAF48663.1| leucine-rich repeat/extensin [Nicotiana plumbaginifolia]
           gi|127058167|dbj|BAF48664.1| leucine-rich
           repeat/extensin [Nicotiana plumbaginifolia]
          Length = 725

 Score =  117 bits (292), Expect = 1e-24
 Identities = 62/115 (53%), Positives = 74/115 (64%), Gaps = 11/115 (9%)
 Frame = -2

Query: 388 RFTGVIPSNVCQLPSLQNFTYSFNYFTGEAPSCAAAFRPGGNAVSNSIQNCIPGKNDQKS 209
           + TGVIP+++CQLP LQNFTYSFNYFTGEAP CAA  R G   + +  +NCI GK DQ+S
Sbjct: 300 KLTGVIPASICQLPRLQNFTYSFNYFTGEAPVCAAT-RSG--RIVDGEENCIAGKEDQRS 356

Query: 208 AKQCSSEAAKPYDCRKSACF--------VNPTP---PTKVAPPSHGSTPPSQGSS 77
           AK+CSS+ AKPYDCRKS CF        V P P   P    PP     P  + S+
Sbjct: 357 AKECSSDDAKPYDCRKSQCFSRSAISAVVKPRPKPTPKPKRPPVQNKPPAPKPST 411


>dbj|BAF48665.1| leucine-rich repeat/extensin 1 [Nicotiana tabacum]
          Length = 723

 Score =  115 bits (288), Expect = 4e-24
 Identities = 64/134 (47%), Positives = 75/134 (55%), Gaps = 30/134 (22%)
 Frame = -2

Query: 388 RFTGVIPSNVCQLPSLQNFTYSFNYFTGEAPSCAAAFRPGGNAVSNSIQNCIPGKNDQKS 209
           + TGVIP+++CQLP LQNFT+SFNYF GEAP CAA  R G   V +  +NCI GK DQ+S
Sbjct: 300 KLTGVIPASICQLPRLQNFTFSFNYFKGEAPVCAAT-RSG--RVIDGEENCIAGKEDQRS 356

Query: 208 AKQCSSEAAKPYDCRKSACF------------------------------VNPTPPTKVA 119
           AK+CSS+ AKPYDCRKS CF                                P+PPTK  
Sbjct: 357 AKECSSDDAKPYDCRKSQCFSRSAISPVVKPRPKPTPKPKRPPVQNKPPAPKPSPPTKPI 416

Query: 118 PPSHGSTPPSQGSS 77
            P     PPS  SS
Sbjct: 417 VPIESPPPPSSKSS 430


>ref|XP_002514492.1| LRX2, putative [Ricinus communis] gi|223546391|gb|EEF47892.1| LRX2,
           putative [Ricinus communis]
          Length = 766

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/78 (65%), Positives = 62/78 (79%)
 Frame = -2

Query: 385 FTGVIPSNVCQLPSLQNFTYSFNYFTGEAPSCAAAFRPGGNAVSNSIQNCIPGKNDQKSA 206
           FTGV+P+++CQLPSLQNFTYSFNYFTGEAPSCAA    G   ++   +NCIPGK DQ+SA
Sbjct: 301 FTGVVPASICQLPSLQNFTYSFNYFTGEAPSCAAI--GGSRVLTKGTKNCIPGKMDQRSA 358

Query: 205 KQCSSEAAKPYDCRKSAC 152
           K+CSSE A+P +C K  C
Sbjct: 359 KECSSEKARPVNCSKFKC 376


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