BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016953
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002883427.1| nucleic acid binding protein [Arabidopsis ly...   128   3e-27
ref|XP_002314482.1| predicted protein [Populus trichocarpa] gi|2...   128   3e-27
ref|NP_188979.2| RNA recognition motif-containing protein [Arabi...   120   4e-25
ref|NP_001118682.1| RNA recognition motif-containing protein [Ar...   112   1e-22
gb|ABF59161.1| unknown protein [Arabidopsis thaliana]                  79   2e-12

>ref|XP_002883427.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329267|gb|EFH59686.1| nucleic acid binding protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 785

 Score =  128 bits (321), Expect = 3e-27
 Identities = 101/332 (30%), Positives = 160/332 (48%), Gaps = 9/332 (2%)
 Frame = +2

Query: 68   VAQSKYDEFADSVEKMNDGGSSSVARNYSSEDSLEIDEVHKSSNKAELATTRS-----VS 232
            +A     +  DS+    D G  + A + ++  S E     KS +K+  A  +S       
Sbjct: 383  MAVGSMKKLMDSLNLPTDNGMDAQANSLNASSSEE-----KSISKSNSAFQKSDGFCATE 437

Query: 233  PEYSRKDIESMNN-ILNSTKFPHSLEDNSEKVVPCTNNLVDPKQNQNKGILKFVPPGTEK 409
             E S+ +   M N  L S     +   N +        L   + + NK +L+F+    +K
Sbjct: 438  EEESKGETLVMENQSLCSQATLAATTANPKVTKKSLFALSAGEHSPNKVLLRFLQESCQK 497

Query: 410  GDIFLAFLGWADIVEVKILD--DGDVYRLAYIYFKNKEELLKALNRSDLIVRNRTVVLEA 583
              I   F  +  ++ V+ +   +G +Y+ A + F+    + KAL +  + V N   V+EA
Sbjct: 498  KHIVEVFSQFGAVLHVQEIPSFEGCIYKDALLTFETNTAVKKALEKGRVTVMNNNAVVEA 557

Query: 584  ASPMENGSKKLPKPLLIGEQTVPSEIIKNTSRTVMMGGFGCDINLRDLRKVLAFCGGNMS 763
             S  E+  +++  P LIG+  VP  ++K  SRTV +     D +   +++ L FC  N+S
Sbjct: 558  TS-QEDMVERICIPDLIGDPDVPVALVKEPSRTVKIHPLTHDFSSNQIKEALKFCRSNIS 616

Query: 764  GIFFGPSSSSAYVEFETEDDKEMALAKQPVHVMGKQISILRIDTPRTTVVRISYGDMSGQ 943
                G S + A+VEFETED KE ALA+  + +   Q+ I RID PRTTV RIS    S  
Sbjct: 617  KFILGSSRTDAFVEFETEDGKERALAEHSISICNTQLFISRIDIPRTTVARISNLSKSAM 676

Query: 944  K-VSSICTSLGRVKHFNWRCLGIVDVHYCFSE 1036
            K V ++C   G++K    R  G+VDV +  SE
Sbjct: 677  KDVRALCVPYGQIKQVYIRGNGVVDVLFDVSE 708


>ref|XP_002314482.1| predicted protein [Populus trichocarpa] gi|222863522|gb|EEF00653.1|
            predicted protein [Populus trichocarpa]
          Length = 702

 Score =  128 bits (321), Expect = 3e-27
 Identities = 94/307 (30%), Positives = 155/307 (50%), Gaps = 10/307 (3%)
 Frame = +2

Query: 146  NYSSEDSLEIDEVHKSSNKAELATTRSVSPEYSRKD----IESMNNILNSTKFPHSLEDN 313
            N  S  ++  D     +NK      +  S +   KD    ++    I+   K P +  + 
Sbjct: 326  NAESRKTVLKDRAVSKNNKKRSKIKKEQSAKTMTKDEGGNLDIAKRIIKLEKTPQAPLET 385

Query: 314  SEK---VVPCTNNLVDPKQNQNKGILKFVPPGTEKGDIFLAFLGWADIVEVKILDDGDVY 484
            SEK     P T+ L D    +NK +L+F+      GDI   F     I +++ +      
Sbjct: 386  SEKDSNQTPLTS-LADG-DTENKLLLRFLHKDVGDGDIISCFRNCGPISKIEKVSSVKGS 443

Query: 485  RL--AYIYFKNKEELLKALNRSDLIVRNRTVVLEAASPMENGSKKLPKPLLIGEQTVPSE 658
             L  A+++F+ ++ L KAL + +++++N    +       + + ++  P LIG+  +   
Sbjct: 444  NLFDAFLHFETRQGLHKALEKPEVLIKNSNAFIH------DTASRISIPNLIGDIDISVA 497

Query: 659  IIKNTSRTVMMGGFGCDINLRDLRKVLAFCGGNMSGIFFGPSSSSAYVEFETEDDKEMAL 838
            ++K+ +RTV +     DI+   L++ L+FC   ++ +F G SSS+AYVEFE+ED KE AL
Sbjct: 498  LVKHPTRTVKIKQLTDDISSHQLKEALSFCRSGIN-VFLGASSSNAYVEFESEDAKERAL 556

Query: 839  AKQPVHVMGKQISILRIDTPRTTVVRI-SYGDMSGQKVSSICTSLGRVKHFNWRCLGIVD 1015
            AK  + V GKQ+SI R+D PRTTVVRI +        V +IC S G++     R   I D
Sbjct: 557  AKHFLQVSGKQLSIFRVDAPRTTVVRILNINPQCRSNVLTICKSFGKLWRMKLRHENIAD 616

Query: 1016 VHYCFSE 1036
            V++   E
Sbjct: 617  VYFKIDE 623


>ref|NP_188979.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
            gi|11994322|dbj|BAB02281.1| unnamed protein product
            [Arabidopsis thaliana] gi|332643236|gb|AEE76757.1| RNA
            recognition motif-containing protein [Arabidopsis
            thaliana]
          Length = 811

 Score =  120 bits (302), Expect = 4e-25
 Identities = 77/231 (33%), Positives = 125/231 (54%), Gaps = 4/231 (1%)
 Frame = +2

Query: 356  KQNQNKGILKFVPPGTEKGDIFLAFLG-WADIVEVKILD--DGDVYRLAYIYFKNKEELL 526
            + + NK +L+F+P  + K  I  AF   +  ++ V+ +   +G +Y+ A + F+    + 
Sbjct: 505  EHSPNKVLLRFLPESSMKKHIVKAFSSQFGAVLHVQEIPSIEGCIYKDALLTFETNTAVK 564

Query: 527  KALNRSDLIVRNRTVVLEAASPMENGSKKLPKPLLIGEQTVPSEIIKNTSRTVMMGGFGC 706
            KAL +  + V N   V+EA S  E+  +++  P LIG+  VP  ++K  +RTV +     
Sbjct: 565  KALKKGHVTVMNYNTVVEATS-QEDMVERICIPDLIGDPDVPVALVKEPARTVKIHPLTH 623

Query: 707  DINLRDLRKVLAFCGGNMSGIFFGPSSSSAYVEFETEDDKEMALAKQPVHVMGKQISILR 886
            D +   +++ L FC  N+S    G S + A+VEFETED KE ALA+  + +   Q+ I R
Sbjct: 624  DFSSNQIKEALKFCRSNISKFTLGSSRTDAFVEFETEDGKERALAEHSISICNTQLFISR 683

Query: 887  IDTPRTTVVRISYGDMSGQK-VSSICTSLGRVKHFNWRCLGIVDVHYCFSE 1036
            ID PRT V RIS    S  + V ++C   G+++    R  G+ DV +  SE
Sbjct: 684  IDIPRTIVARISNLSKSAMRDVRALCVPYGQIRGVYIRGTGVADVFFDISE 734


>ref|NP_001118682.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
            gi|332643237|gb|AEE76758.1| RNA recognition
            motif-containing protein [Arabidopsis thaliana]
          Length = 771

 Score =  112 bits (281), Expect = 1e-22
 Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 1/190 (0%)
 Frame = +2

Query: 470  DGDVYRLAYIYFKNKEELLKALNRSDLIVRNRTVVLEAASPMENGSKKLPKPLLIGEQTV 649
            +G +Y+ A + F+    + KAL +  + V N   V+EA S  E+  +++  P LIG+  V
Sbjct: 506  EGCIYKDALLTFETNTAVKKALKKGHVTVMNYNTVVEATS-QEDMVERICIPDLIGDPDV 564

Query: 650  PSEIIKNTSRTVMMGGFGCDINLRDLRKVLAFCGGNMSGIFFGPSSSSAYVEFETEDDKE 829
            P  ++K  +RTV +     D +   +++ L FC  N+S    G S + A+VEFETED KE
Sbjct: 565  PVALVKEPARTVKIHPLTHDFSSNQIKEALKFCRSNISKFTLGSSRTDAFVEFETEDGKE 624

Query: 830  MALAKQPVHVMGKQISILRIDTPRTTVVRISYGDMSGQK-VSSICTSLGRVKHFNWRCLG 1006
             ALA+  + +   Q+ I RID PRT V RIS    S  + V ++C   G+++    R  G
Sbjct: 625  RALAEHSISICNTQLFISRIDIPRTIVARISNLSKSAMRDVRALCVPYGQIRGVYIRGTG 684

Query: 1007 IVDVHYCFSE 1036
            + DV +  SE
Sbjct: 685  VADVFFDISE 694


>gb|ABF59161.1| unknown protein [Arabidopsis thaliana]
          Length = 226

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
 Frame = +2

Query: 695  GFGCDINLRDLRKVLAFCGGNMSGIFFGPSSSSAYVEFETEDDKEMALAKQPVHVMGKQI 874
            G  C+     +++ L FC  N+S    G S + A+VEFETED KE ALA+  + +   Q+
Sbjct: 35   GRKCERLSNQIKEALKFCRSNISKFTLGSSRTDAFVEFETEDGKERALAEHSISICNTQL 94

Query: 875  SILRIDTPRTTVVRISYGDMSGQK-VSSICTSLGRVKHFNWRCLGIVDVHYCFSE 1036
             I RID PRT V RIS    S  + V ++C   G+++    R  G+ DV +  SE
Sbjct: 95   FISRIDIPRTIVARISNLSKSAMRDVRALCVPYGQIRGVYIRGTGVADVFFDISE 149