BLASTX nr result

ID: Lithospermum22_contig00016940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016940
         (1634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV41032.1| cyclin D-like protein [Nicotiana tabacum]              345   2e-92
emb|CAA09854.1| cyclin D3.2 protein [Nicotiana tabacum]               342   2e-91
dbj|BAE80325.1| cyclin D3-2 [Camellia sinensis]                       330   7e-88
gb|ABY25838.1| D-type cyclin family 3 subgroup 1 [Solanum tubero...   325   2e-86
dbj|BAE06272.1| cyclin D [Scutellaria baicalensis]                    322   1e-85

>gb|AAV41032.1| cyclin D-like protein [Nicotiana tabacum]
          Length = 367

 Score =  345 bits (885), Expect = 2e-92
 Identities = 183/352 (51%), Positives = 243/352 (69%), Gaps = 6/352 (1%)
 Frame = -1

Query: 1379 GLLC------DENDIGFGFGFDDVEIKNGVKKCVTLLEYNVFWENEEVLRLLCKEKETLF 1218
            GL C      D++D+G  +     +++N VKK + LLE ++FWE+++++ LL KEKE+  
Sbjct: 16   GLFCEEDRFLDDDDLG-EWSCTLEQVENNVKKTLPLLECDMFWEDDQLVTLLAKEKESHL 74

Query: 1217 GFGCNNVDECGLGSNGSFRQEAVEWIMKVVEHYGFSCLSGVLAVGYYDRFVCSVYFQKDK 1038
            GF C   D  G G     R+EA++W+++V+ HYGF+ ++ VLAV Y+DRFV  + FQKDK
Sbjct: 75   GFDCLISD--GDGLLVEVRKEALDWMLRVIAHYGFTAMTAVLAVNYFDRFVSGLCFQKDK 132

Query: 1037 PWMSQLVAVACLSIAAKMEEIQVPLLLDLQVEKSKYVFEAKTIMRMELLVLSTLKWRTSI 858
            PWMSQL AVACLSIAAK+EE QVPLLLDLQV  S++VFEAKTI RMELLVLSTLKW+ + 
Sbjct: 133  PWMSQLAAVACLSIAAKVEETQVPLLLDLQVADSRFVFEAKTIQRMELLVLSTLKWKMNP 192

Query: 857  VTPISFFDHFVRRFGLWTNHHKEFSKRCEQILLSVIPDSRILGYLSSVIATAIMLFVLNE 678
            VTP+SF DH +RRFG  +N H +F +RCE+++L +I DSR+L Y  SVIATA+M FV+NE
Sbjct: 193  VTPLSFIDHIMRRFGFMSNLHLDFLRRCERLILGIITDSRLLYYSPSVIATAVMFFVINE 252

Query: 677  IDPEEVMDYRNQLLDILGTDKEKVKEFYQLIMEVMGSHSVAEYGSRKRKQMSVPSSPSGV 498
            I+P   M+Y+NQL+ +L   ++  +E + LI+E+MG+       S KRK  SVP SPSGV
Sbjct: 253  IEPCNAMEYQNQLMSVLKVKQDSFEECHDLILELMGTPGYNICQSLKRKHQSVPGSPSGV 312

Query: 497  IDAYISYCXXXXXXXXXXXXXXXSPEPFFKRGKAQDQPMRLVPLRSISMGTG 342
            IDAY S C               SPEP +KR K QDQ M L PL S+S+  G
Sbjct: 313  IDAYFS-CDSSNDSWSVASSISSSPEPQYKRMKTQDQTMTLAPLSSVSVVVG 363


>emb|CAA09854.1| cyclin D3.2 protein [Nicotiana tabacum]
          Length = 367

 Score =  342 bits (877), Expect = 2e-91
 Identities = 180/342 (52%), Positives = 239/342 (69%)
 Frame = -1

Query: 1367 DENDIGFGFGFDDVEIKNGVKKCVTLLEYNVFWENEEVLRLLCKEKETLFGFGCNNVDEC 1188
            D++D+G  +     ++ N VKK + LLE ++FWE+++++ LL KEKE+  GF C   D  
Sbjct: 26   DDDDLG-EWSSTLEQVGNNVKKTLPLLECDMFWEDDQLVTLLTKEKESHLGFDCLISD-- 82

Query: 1187 GLGSNGSFRQEAVEWIMKVVEHYGFSCLSGVLAVGYYDRFVCSVYFQKDKPWMSQLVAVA 1008
            G G     R+EA++W+++V+ HYGF+ ++ VLAV Y+DRFV  + FQKDKPWMSQL AVA
Sbjct: 83   GDGFLVEVRKEALDWMLRVIAHYGFTAMTAVLAVNYFDRFVSGLCFQKDKPWMSQLAAVA 142

Query: 1007 CLSIAAKMEEIQVPLLLDLQVEKSKYVFEAKTIMRMELLVLSTLKWRTSIVTPISFFDHF 828
            CLSIAAK+EE QVPLLLDLQV  S++VFEAKTI RMELLVLSTLKW+ + VTP+SF DH 
Sbjct: 143  CLSIAAKVEETQVPLLLDLQVADSRFVFEAKTIQRMELLVLSTLKWKMNPVTPLSFIDHI 202

Query: 827  VRRFGLWTNHHKEFSKRCEQILLSVIPDSRILGYLSSVIATAIMLFVLNEIDPEEVMDYR 648
            +RRFG  TN H +F +RCE+++L +I DSR+L Y  SVIATA++ FV+NEI+P   M+Y+
Sbjct: 203  MRRFGFMTNLHLDFLRRCERLILGIITDSRLLHYPPSVIATAVVYFVINEIEPCNAMEYQ 262

Query: 647  NQLLDILGTDKEKVKEFYQLIMEVMGSHSVAEYGSRKRKQMSVPSSPSGVIDAYISYCXX 468
            NQL+ +L   ++  +E + LI+E+MG+       S KRK  SVP SPSGVIDAY S C  
Sbjct: 263  NQLMTVLKVKQDSFEECHDLILELMGTSGYNICQSLKRKHQSVPGSPSGVIDAYFS-CDS 321

Query: 467  XXXXXXXXXXXXXSPEPFFKRGKAQDQPMRLVPLRSISMGTG 342
                         SPEP +KR K QDQ M L PL S+S+  G
Sbjct: 322  SNDSWSVASSISSSPEPQYKRIKTQDQTMTLAPLSSVSVVVG 363


>dbj|BAE80325.1| cyclin D3-2 [Camellia sinensis]
          Length = 372

 Score =  330 bits (846), Expect = 7e-88
 Identities = 182/376 (48%), Positives = 248/376 (65%), Gaps = 5/376 (1%)
 Frame = -1

Query: 1451 LKKMLFSSEKDPIFANNTDNIDVCGLLCDE----NDIG-FGFGFDDVEIKNGVKKCVTLL 1287
            +K+M    E+D    N     D  GL C+E    +D+G +G           VK  +  L
Sbjct: 1    MKRMSPYPEQDSHLQNPMFVFD--GLYCEEEHFEDDLGEYGLEQGSDNCDENVKGPLVFL 58

Query: 1286 EYNVFWENEEVLRLLCKEKETLFGFGCNNVDECGLGSNGSFRQEAVEWIMKVVEHYGFSC 1107
            E++  W+++E++ L+ KEKET  G    N DE  + +    R+E+V+WI++V+ HYGF+ 
Sbjct: 59   EHDWDWDDDELVSLISKEKETHLGLSVLNSDESLMVA----RRESVDWILRVIAHYGFTV 114

Query: 1106 LSGVLAVGYYDRFVCSVYFQKDKPWMSQLVAVACLSIAAKMEEIQVPLLLDLQVEKSKYV 927
            L+ VLAV Y+DRF+ S+ FQ++KPWMSQLVAVACLS+AAK+EE QVPLLLD QVE+SK+V
Sbjct: 115  LTTVLAVNYFDRFISSLSFQREKPWMSQLVAVACLSLAAKVEETQVPLLLDFQVEESKFV 174

Query: 926  FEAKTIMRMELLVLSTLKWRTSIVTPISFFDHFVRRFGLWTNHHKEFSKRCEQILLSVIP 747
            FEAKTI RMELLVLSTL+W+ + VTP+SF DH VRRFG  TN H EF  RCE++LLS I 
Sbjct: 175  FEAKTIQRMELLVLSTLQWKMNPVTPLSFVDHIVRRFGFKTNLHLEFLWRCERLLLSAIT 234

Query: 746  DSRILGYLSSVIATAIMLFVLNEIDPEEVMDYRNQLLDILGTDKEKVKEFYQLIMEVMGS 567
            DSR   YL SV+A A ML V+ E++P  V+D +N+L+D+L   K+KV + Y+LI+E+ G+
Sbjct: 235  DSRFGCYLPSVLAAATMLHVIKEVEPSNVLDCQNELMDVLKMSKDKVDDCYKLILELPGN 294

Query: 566  HSVAEYGSRKRKQMSVPSSPSGVIDAYISYCXXXXXXXXXXXXXXXSPEPFFKRGKAQDQ 387
            +S  +  + KRK  S+P+SP+GVID   S C               SPEP FK+ +   Q
Sbjct: 295  NSQMQCQTHKRKYQSIPNSPNGVIDVNFS-CDSSNDSWAVTSSVSSSPEPLFKKSRVHGQ 353

Query: 386  PMRLVPLRSISMGTGG 339
             MRL PLR +S+G  G
Sbjct: 354  QMRLAPLRHMSVGVVG 369


>gb|ABY25838.1| D-type cyclin family 3 subgroup 1 [Solanum tuberosum]
          Length = 363

 Score =  325 bits (833), Expect = 2e-86
 Identities = 180/350 (51%), Positives = 232/350 (66%), Gaps = 10/350 (2%)
 Frame = -1

Query: 1379 GLLCDEN-----DIGFGFGFDDVEIKN-----GVKKCVTLLEYNVFWENEEVLRLLCKEK 1230
            GL C+E+     D+G   G+  +++ N      VKK + LLE ++FWE++E+  LL KEK
Sbjct: 19   GLYCEEDRFLDDDLG---GWSSLDVGNEKWVENVKKTLPLLECDMFWEHDELATLLSKEK 75

Query: 1229 ETLFGFGCNNVDECGLGSNGSFRQEAVEWIMKVVEHYGFSCLSGVLAVGYYDRFVCSVYF 1050
            E   GF     D    GS    R+EA++W+++V+ +YGF+  + VLAV Y+DRFV  + F
Sbjct: 76   EFHLGFESLISD----GSLMGVRKEALDWMLRVIGYYGFTATTAVLAVSYFDRFVSGLXF 131

Query: 1049 QKDKPWMSQLVAVACLSIAAKMEEIQVPLLLDLQVEKSKYVFEAKTIMRMELLVLSTLKW 870
            QKDKPWM QL AVACLSIAAK+EE QVPLLLDLQV  SK+VFEAKTI RMELLVLSTLKW
Sbjct: 132  QKDKPWMIQLAAVACLSIAAKVEETQVPLLLDLQVADSKFVFEAKTIQRMELLVLSTLKW 191

Query: 869  RTSIVTPISFFDHFVRRFGLWTNHHKEFSKRCEQILLSVIPDSRILGYLSSVIATAIMLF 690
            + ++VTP+SF DH +RRFG  TN H +F K+CE+++L +I DSR+L Y  SVIATA M +
Sbjct: 192  KMNLVTPLSFIDHIMRRFGFMTNLHLDFLKKCERLILDIITDSRLLHYPPSVIATASMFY 251

Query: 689  VLNEIDPEEVMDYRNQLLDILGTDKEKVKEFYQLIMEVMGSHSVAEYGSRKRKQMSVPSS 510
            V+NEI+P   M+Y+NQL+ +L   K+  +E   LI+E+MG+       S KRK  SVP S
Sbjct: 252  VINEIEPNNAMEYQNQLMSVLKVRKDSFEECNDLILELMGTSCYKLCQSLKRKHHSVPGS 311

Query: 509  PSGVIDAYISYCXXXXXXXXXXXXXXXSPEPFFKRGKAQDQPMRLVPLRS 360
            PSGVIDAY S                 SPEP +KR K Q Q M L PL S
Sbjct: 312  PSGVIDAYFS-SESSNESWSVASSISSSPEPQYKRNKTQGQRMTLAPLGS 360


>dbj|BAE06272.1| cyclin D [Scutellaria baicalensis]
          Length = 372

 Score =  322 bits (826), Expect = 1e-85
 Identities = 183/357 (51%), Positives = 232/357 (64%), Gaps = 10/357 (2%)
 Frame = -1

Query: 1376 LLCDENDI-----GFGFGFDDVEIKNGVK----KCVTLLEYNVFWENEEVLRLLCKEK-E 1227
            L CDE        G G GF + EI +  +        L E+++FWE+EE+  LL KEK +
Sbjct: 20   LYCDEERFDECVGGAGSGFKEPEINDFNEIHNNPFAFLFEHDLFWESEELDALLTKEKTQ 79

Query: 1226 TLFGFGCNNVDECGLGSNGSFRQEAVEWIMKVVEHYGFSCLSGVLAVGYYDRFVCSVYFQ 1047
            T   F   N D     S  + R EA+ W++KV+ HYGF+ L+ VLAV YYDRF+ SV FQ
Sbjct: 80   THLTFDEINSD----ASLKAMRNEAINWMLKVIAHYGFNALTAVLAVNYYDRFITSVCFQ 135

Query: 1046 KDKPWMSQLVAVACLSIAAKMEEIQVPLLLDLQVEKSKYVFEAKTIMRMELLVLSTLKWR 867
            KDKPWMSQL AVACLS+AAK+EE QVPLLLDLQVE+SKY+FEAKTI RMELLVLSTL+WR
Sbjct: 136  KDKPWMSQLAAVACLSVAAKVEETQVPLLLDLQVEESKYLFEAKTIQRMELLVLSTLQWR 195

Query: 866  TSIVTPISFFDHFVRRFGLWTNHHKEFSKRCEQILLSVIPDSRILGYLSSVIATAIMLFV 687
             + VTPISFFDH  RRF    N H  F +RCE ++LS+I D R++ Y  SVIA+A M++ 
Sbjct: 196  MNPVTPISFFDHIARRFEFVKNLHSVFLRRCESLILSIITDCRLVKYFPSVIASAAMIYA 255

Query: 686  LNEIDPEEVMDYRNQLLDILGTDKEKVKEFYQLIMEVMGSHSVAEYGSRKRKQMSVPSSP 507
            + E +  + ++Y +QLL +L T K+KV +  +LI++ M     +     KRK  S+PSSP
Sbjct: 256  IREFETPDALEYEDQLLSVLRTSKDKVDDCRKLIVDAMYG-GFSHKPCYKRKYESIPSSP 314

Query: 506  SGVIDAYISYCXXXXXXXXXXXXXXXSPEPFFKRGKAQDQPMRLVPLRSISMGTGGR 336
            SGVIDAY+S                 SPEP FKR KAQDQ MRL PL S+S+G   R
Sbjct: 315  SGVIDAYLS-SDSSVDSWAVTLSVSSSPEPSFKRSKAQDQHMRLAPLSSVSLGLAHR 370


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