BLASTX nr result

ID: Lithospermum22_contig00016912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016912
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containi...   105   7e-21
emb|CAN65544.1| hypothetical protein VITISV_018576 [Vitis vinifera]   105   7e-21
ref|XP_002528029.1| pentatricopeptide repeat-containing protein,...   105   1e-20
ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19

>ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Vitis vinifera]
          Length = 725

 Score =  105 bits (263), Expect = 7e-21
 Identities = 48/85 (56%), Positives = 65/85 (76%)
 Frame = -3

Query: 709 LYQEAIDLFQKMMSDGFSPNHYTLEVVLRICELAGFADEACRFFSLMTERYKIKATEEHY 530
           LYQ+AI+LF +M SDGF PNHYT + VL ICE A  AD+AC  F+LM+ RY+IKA+ EHY
Sbjct: 639 LYQDAINLFHQMQSDGFIPNHYTFKAVLSICERAELADDACLIFNLMSRRYRIKASNEHY 698

Query: 529 TIIIDLLTHLGLVEKAQRFMRLKES 455
           + II+LL  +G  E AQRF++++ +
Sbjct: 699 SSIIELLNRVGRTEDAQRFIQMRSA 723


>emb|CAN65544.1| hypothetical protein VITISV_018576 [Vitis vinifera]
          Length = 664

 Score =  105 bits (263), Expect = 7e-21
 Identities = 48/85 (56%), Positives = 65/85 (76%)
 Frame = -3

Query: 709 LYQEAIDLFQKMMSDGFSPNHYTLEVVLRICELAGFADEACRFFSLMTERYKIKATEEHY 530
           LYQ+AI+LF +M SDGF PNHYT + VL ICE A  AD+AC  F+LM+ RY+IKA+ EHY
Sbjct: 578 LYQDAINLFHQMQSDGFIPNHYTFKAVLSICERAELADDACLIFNLMSRRYRIKASNEHY 637

Query: 529 TIIIDLLTHLGLVEKAQRFMRLKES 455
           + II+LL  +G  E AQRF++++ +
Sbjct: 638 SSIIELLNRVGRTEDAQRFIQMRSA 662


>ref|XP_002528029.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532559|gb|EEF34347.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 208

 Score =  105 bits (261), Expect = 1e-20
 Identities = 46/85 (54%), Positives = 66/85 (77%)
 Frame = -3

Query: 709 LYQEAIDLFQKMMSDGFSPNHYTLEVVLRICELAGFADEACRFFSLMTERYKIKATEEHY 530
           L ++AI LF +M+S GF+P H+T  VVL IC+ AGFAD+ACR F LM+ RYKIKA+EEHY
Sbjct: 122 LQRDAIHLFHEMISGGFTPTHFTFTVVLNICDQAGFADDACRIFELMSRRYKIKASEEHY 181

Query: 529 TIIIDLLTHLGLVEKAQRFMRLKES 455
           +++I LLT  G +++A++F ++  S
Sbjct: 182 SVLIGLLTRAGRIQEAKKFTQMSSS 206


>ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cucumis sativus]
          Length = 716

 Score =  100 bits (250), Expect = 2e-19
 Identities = 47/79 (59%), Positives = 61/79 (77%)
 Frame = -3

Query: 712 GLYQEAIDLFQKMMSDGFSPNHYTLEVVLRICELAGFADEACRFFSLMTERYKIKATEEH 533
           G +QEAIDLF +M S G SPNH+T +VVL IC+ AGF DEA R F LM+ RYKIK +EEH
Sbjct: 601 GEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKPSEEH 660

Query: 532 YTIIIDLLTHLGLVEKAQR 476
           Y+++I +LT  G +E+A+R
Sbjct: 661 YSLVIAILTRFGRLEEARR 679


>ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cucumis sativus]
          Length = 696

 Score =  100 bits (250), Expect = 2e-19
 Identities = 47/79 (59%), Positives = 61/79 (77%)
 Frame = -3

Query: 712 GLYQEAIDLFQKMMSDGFSPNHYTLEVVLRICELAGFADEACRFFSLMTERYKIKATEEH 533
           G +QEAIDLF +M S G SPNH+T +VVL IC+ AGF DEA R F LM+ RYKIK +EEH
Sbjct: 601 GEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKPSEEH 660

Query: 532 YTIIIDLLTHLGLVEKAQR 476
           Y+++I +LT  G +E+A+R
Sbjct: 661 YSLVIAILTRFGRLEEARR 679


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