BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016828
         (1702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270990.1| PREDICTED: pentatricopeptide repeat-containi...   631   e-178
ref|XP_002526972.1| pentatricopeptide repeat-containing protein,...   588   e-165
ref|XP_004141120.1| PREDICTED: pentatricopeptide repeat-containi...   572   e-160
ref|XP_003524728.1| PREDICTED: pentatricopeptide repeat-containi...   570   e-160
ref|XP_003553289.1| PREDICTED: pentatricopeptide repeat-containi...   563   e-158

>ref|XP_002270990.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
            mitochondrial [Vitis vinifera]
            gi|296087577|emb|CBI34833.3| unnamed protein product
            [Vitis vinifera]
          Length = 445

 Score =  631 bits (1628), Expect = e-178
 Identities = 304/440 (69%), Positives = 377/440 (85%)
 Frame = -3

Query: 1643 LMKLLQYLAGRPSSAIRTLGGRRGYAAVANEEEYLKRNYANNVSEYNTVIGSITAQRRYY 1464
            + KLLQ +AG+  S +    GRR +AA  + EEY KRNYA+NVSEY TV+ S+TAQRR++
Sbjct: 1    MKKLLQIVAGQRCSPLLRALGRRYFAA--STEEYAKRNYASNVSEYTTVVSSLTAQRRHF 58

Query: 1463 LLRDVYDDMMLDGVKPERDTFHSLMIGTMKGARLQDAFFFRDEMRTMGLVPDVALYNFLI 1284
            LLRD YDDMMLDGV+P RD FHSL++GTMKGARLQD+FFF D+M+TMGLVPDVALYNFL+
Sbjct: 59   LLRDAYDDMMLDGVQPSRDIFHSLIVGTMKGARLQDSFFFIDQMKTMGLVPDVALYNFLV 118

Query: 1283 STCGKCKHSDQAIWLLEQMKVFEIKPTGQTFICLLNACAASGRLDRVYAIVRDMTAAGLG 1104
            STCGKCK+SDQAI +LE+MK  E+KPTGQT+ICLLNACAASGR DRVYAIVRDMTAAGLG
Sbjct: 119  STCGKCKNSDQAIHILEEMKKNEVKPTGQTYICLLNACAASGRTDRVYAIVRDMTAAGLG 178

Query: 1103 LNKYCYAGLIDAHRNANPRPTDAAAKILELVEQSKGWSAVEGSRNVAENVMMGITEEALY 924
            LNK+CYAGLI AH+N  P   D A+KI+ELVEQSKGWS++E +R++AENVMMG++EE LY
Sbjct: 179  LNKFCYAGLIAAHKNKIPLTDDTASKIIELVEQSKGWSSIEATRDMAENVMMGVSEEELY 238

Query: 923  CMPTAEYVHRRGGFVDKRLTVYHVAFYAFADLKNVEAMEALLDMLSKEDKSPDGFITWHM 744
             +PTAEYVHRR GF++++LTVYHVA +AFADL+NVEAME LL+ML KE K+PD F+    
Sbjct: 239  NIPTAEYVHRRAGFLNRQLTVYHVALHAFADLRNVEAMETLLEMLKKEGKTPDVFLIMQT 298

Query: 743  IRCYGNSGDIEKGLKVFKDYINSGKTPAIELYVALVEGAMIGYTERGMQIAEETLVKVNS 564
            +RCY +SG+I++GL++F++Y+NSGK   +ELYV LVEGAM+GYT +GM++A++TLVK+N+
Sbjct: 299  MRCYLHSGNIDRGLQIFEEYMNSGKPAMVELYVTLVEGAMVGYTPKGMELAQDTLVKMNA 358

Query: 563  RGFFLSPKMGSELLMAASGEKTGGYTTANLLWDMMQASKIVPTLTAVEAYHNGLKEREIP 384
            RGFFLSP+MGSELL+ ASGEKTGGYTTAN +WD+MQA KI P+  AVEAY+NGL+EREIP
Sbjct: 359  RGFFLSPRMGSELLLVASGEKTGGYTTANYIWDLMQARKITPSFPAVEAYYNGLREREIP 418

Query: 383  ADDPRLLHVTKILDNLRRRF 324
             DD RL+ V++  DN R RF
Sbjct: 419  EDDARLVLVSRAYDNQRLRF 438


>ref|XP_002526972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223533724|gb|EEF35459.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 510

 Score =  588 bits (1517), Expect = e-165
 Identities = 280/420 (66%), Positives = 350/420 (83%)
 Frame = -3

Query: 1583 GRRGYAAVANEEEYLKRNYANNVSEYNTVIGSITAQRRYYLLRDVYDDMMLDGVKPERDT 1404
            GR   AA ++  EY KRNYA+N+SEYNTV+GS+ AQRR++LLR+VYDDMMLDGV+P R+T
Sbjct: 61   GRHYSAAASSTAEYDKRNYASNLSEYNTVVGSLIAQRRHFLLREVYDDMMLDGVQPSRET 120

Query: 1403 FHSLMIGTMKGARLQDAFFFRDEMRTMGLVPDVALYNFLISTCGKCKHSDQAIWLLEQMK 1224
            F+SL++GT+KGARL DAFFFRD+M+ MGL+PDV+LYNFLISTCGKCK+SDQA+ +LE+MK
Sbjct: 121  FYSLIVGTLKGARLSDAFFFRDQMKAMGLLPDVSLYNFLISTCGKCKNSDQAVQILEEMK 180

Query: 1223 VFEIKPTGQTFICLLNACAASGRLDRVYAIVRDMTAAGLGLNKYCYAGLIDAHRNANPRP 1044
            + E+KP GQT++CLLNACAA+GRLDRVYAIVRDMTAAG GLNK+CYAGLI AH N  P  
Sbjct: 181  INEVKPNGQTYVCLLNACAAAGRLDRVYAIVRDMTAAGAGLNKFCYAGLIAAHMNKKPLS 240

Query: 1043 TDAAAKILELVEQSKGWSAVEGSRNVAENVMMGITEEALYCMPTAEYVHRRGGFVDKRLT 864
             D A +I+ELVEQSKGWS+VE S   AENVMMGI+EE L+ +PTA+Y HRRG F+ K LT
Sbjct: 241  DDTAKRIIELVEQSKGWSSVESSNYNAENVMMGISEEELFNLPTADYAHRRGAFIIKPLT 300

Query: 863  VYHVAFYAFADLKNVEAMEALLDMLSKEDKSPDGFITWHMIRCYGNSGDIEKGLKVFKDY 684
            VYH AF+A A+L+NVEA++ LL+ML K+  SPD FIT  ++RCY +SGDI+ GLK+F++Y
Sbjct: 301  VYHAAFHACAELRNVEAIQTLLEMLKKDGNSPDVFITMQVMRCYLHSGDIDSGLKIFEEY 360

Query: 683  INSGKTPAIELYVALVEGAMIGYTERGMQIAEETLVKVNSRGFFLSPKMGSELLMAASGE 504
            + SGK   IELY  LVEGAM+GYT +GMQ+A++TLV + SR   L  + G++LL+ A+GE
Sbjct: 361  MKSGKISGIELYTTLVEGAMVGYTPKGMQLAQDTLVMMGSRNLSLGLRQGNDLLLMAAGE 420

Query: 503  KTGGYTTANLLWDMMQASKIVPTLTAVEAYHNGLKEREIPADDPRLLHVTKILDNLRRRF 324
            KTGGYTTAN +WD+M+A K  P+L AVEAY+NGLKEREIP DDPRLL V++I DNLR RF
Sbjct: 421  KTGGYTTANYIWDLMRARKFTPSLQAVEAYYNGLKEREIPEDDPRLLEVSRIYDNLRVRF 480


>ref|XP_004141120.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
            mitochondrial-like [Cucumis sativus]
            gi|449489492|ref|XP_004158328.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g35850,
            mitochondrial-like [Cucumis sativus]
          Length = 442

 Score =  572 bits (1474), Expect = e-160
 Identities = 276/439 (62%), Positives = 353/439 (80%)
 Frame = -3

Query: 1640 MKLLQYLAGRPSSAIRTLGGRRGYAAVANEEEYLKRNYANNVSEYNTVIGSITAQRRYYL 1461
            MKLLQ LAG+  S +R LG RR +A   + EEY KRNYA+NV+EY TVI S+TAQRRY+ 
Sbjct: 1    MKLLQSLAGQSRSLVRFLGQRRSFAV--STEEYRKRNYADNVAEYKTVIASLTAQRRYFS 58

Query: 1460 LRDVYDDMMLDGVKPERDTFHSLMIGTMKGARLQDAFFFRDEMRTMGLVPDVALYNFLIS 1281
            L DVYDDMMLDGV+P  D FH L+ GTMKGAR Q AFFFRDEM+ MGL+PDV+LYN LIS
Sbjct: 59   LTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLIS 118

Query: 1280 TCGKCKHSDQAIWLLEQMKVFEIKPTGQTFICLLNACAASGRLDRVYAIVRDMTAAGLGL 1101
             CGKC +S++A+ +L++M+ +E+KP  QT+ICLLNACAA+GRLDRVY IVRDMT+AGLGL
Sbjct: 119  LCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGL 178

Query: 1100 NKYCYAGLIDAHRNANPRPTDAAAKILELVEQSKGWSAVEGSRNVAENVMMGITEEALYC 921
            NK+CYAGLI AH N  P   D   K++E VE+SK W +V+ S   AEN MMG++EE LY 
Sbjct: 179  NKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEELYN 238

Query: 920  MPTAEYVHRRGGFVDKRLTVYHVAFYAFADLKNVEAMEALLDMLSKEDKSPDGFITWHMI 741
            +PTAEYVHRRGGF++K+LT+YHVA  A A+LKNV+ ME ++DML K+ K+PD ++   ++
Sbjct: 239  IPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIMQVM 298

Query: 740  RCYGNSGDIEKGLKVFKDYINSGKTPAIELYVALVEGAMIGYTERGMQIAEETLVKVNSR 561
            RCY +SGDI++G K F++++NSG + A ELY  LVEGAMIGYT +GMQ+A+ETL  +NSR
Sbjct: 299  RCYLHSGDIDRGHKAFEEHLNSGGSIAPELYTTLVEGAMIGYTPKGMQLAQETLENMNSR 358

Query: 560  GFFLSPKMGSELLMAASGEKTGGYTTANLLWDMMQASKIVPTLTAVEAYHNGLKEREIPA 381
            GFFL+P+ GSELL+AA+GEKTGGYTTAN +WD+++A +I P   AV+AY+ GLK+REIP 
Sbjct: 359  GFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKREIPE 418

Query: 380  DDPRLLHVTKILDNLRRRF 324
            DDPRL+ VT+I +NL+ RF
Sbjct: 419  DDPRLVLVTRIHENLQARF 437


>ref|XP_003524728.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
            mitochondrial-like [Glycine max]
          Length = 450

 Score =  570 bits (1468), Expect = e-160
 Identities = 281/444 (63%), Positives = 354/444 (79%), Gaps = 5/444 (1%)
 Frame = -3

Query: 1640 MKLLQYLAGRPSSAIRT-----LGGRRGYAAVANEEEYLKRNYANNVSEYNTVIGSITAQ 1476
            MK LQ L  +   A RT     + G R ++   + EEY KRNYANNV+EYNTV+GS+TAQ
Sbjct: 1    MKFLQSLIAQSRYAARTRPLNRVSGLRFFSV--STEEYSKRNYANNVAEYNTVLGSLTAQ 58

Query: 1475 RRYYLLRDVYDDMMLDGVKPERDTFHSLMIGTMKGARLQDAFFFRDEMRTMGLVPDVALY 1296
            RR +LLRDVYDDMMLDGVKP RDTFHSL++GTMKGAR+QDAF+F ++M+ MGL+PDV LY
Sbjct: 59   RRNFLLRDVYDDMMLDGVKPTRDTFHSLVVGTMKGARMQDAFYFVEQMKIMGLLPDVTLY 118

Query: 1295 NFLISTCGKCKHSDQAIWLLEQMKVFEIKPTGQTFICLLNACAASGRLDRVYAIVRDMTA 1116
            NFLISTCGKCK+S++AI +LE+MK  E+KP  QT+ICLLNACAA GR+DRVYAIVRDMTA
Sbjct: 119  NFLISTCGKCKNSNKAIQILEEMKCMEVKPNIQTYICLLNACAADGRIDRVYAIVRDMTA 178

Query: 1115 AGLGLNKYCYAGLIDAHRNANPRPTDAAAKILELVEQSKGWSAVEGSRNVAENVMMGITE 936
            AGLGLN++CYAGLI AH+N  P P D AAK++E VE+SK WS+VE +   AENVMMG+T+
Sbjct: 179  AGLGLNEFCYAGLIVAHKNKKPLPDDFAAKVIEFVERSKMWSSVETNSANAENVMMGVTD 238

Query: 935  EALYCMPTAEYVHRRGGFVDKRLTVYHVAFYAFADLKNVEAMEALLDMLSKEDKSPDGFI 756
            E LY +PTAEY HRRGGF+ ++ T YH AF+A ADLKNVE  + LLDML+K+ K+PD FI
Sbjct: 239  EELYNLPTAEYAHRRGGFLVRQFTAYHTAFHAAADLKNVELTDTLLDMLNKKGKTPDLFI 298

Query: 755  TWHMIRCYGNSGDIEKGLKVFKDYINSGKTPAIELYVALVEGAMIGYTERGMQIAEETLV 576
               +IRCY ++GDIE+GL+ F++++   +  A EL+V L EGAMIGYTE+GMQ+A++ LV
Sbjct: 299  LMQVIRCYCHAGDIERGLQTFENHLRLDRPVASELFVTLAEGAMIGYTEKGMQMAQDVLV 358

Query: 575  KVNSRGFFLSPKMGSELLMAASGEKTGGYTTANLLWDMMQASKIVPTLTAVEAYHNGLKE 396
            ++N R  F++ K+GSELL  A+GEKTGGYTTAN +WDMM+A  I P+  AVEAY+ GLK+
Sbjct: 359  RMNERNIFVNNKLGSELLFVAAGEKTGGYTTANYIWDMMRARGITPSFPAVEAYYQGLKD 418

Query: 395  REIPADDPRLLHVTKILDNLRRRF 324
            REIP DDPRL+ V+ I +NL  RF
Sbjct: 419  REIPEDDPRLVLVSGIYNNLSVRF 442


>ref|XP_003553289.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
            mitochondrial-like [Glycine max]
          Length = 450

 Score =  563 bits (1452), Expect = e-158
 Identities = 277/444 (62%), Positives = 350/444 (78%), Gaps = 5/444 (1%)
 Frame = -3

Query: 1640 MKLLQYLAGRPSSAIRT-----LGGRRGYAAVANEEEYLKRNYANNVSEYNTVIGSITAQ 1476
            MK LQ L  +   A R      + G R ++   + EEY KRNYANNV+EYNTV+GS+TAQ
Sbjct: 1    MKFLQSLIAQSRYAARAGSLNRVSGLRFFSV--STEEYSKRNYANNVAEYNTVLGSLTAQ 58

Query: 1475 RRYYLLRDVYDDMMLDGVKPERDTFHSLMIGTMKGARLQDAFFFRDEMRTMGLVPDVALY 1296
            RR +LLRDVYDDMMLDGVKP RDTFHSL +GTMK AR+QDAF+F D+M+ MGL+PDV LY
Sbjct: 59   RRNFLLRDVYDDMMLDGVKPTRDTFHSLAVGTMKAARMQDAFYFADQMKIMGLLPDVTLY 118

Query: 1295 NFLISTCGKCKHSDQAIWLLEQMKVFEIKPTGQTFICLLNACAASGRLDRVYAIVRDMTA 1116
            NFLISTCGKCK+S++AI +LE+MK  E+KP  QT+ICLLNACAA GR+DRVYAIVRDMTA
Sbjct: 119  NFLISTCGKCKNSNKAIQILEEMKCMEVKPNIQTYICLLNACAADGRIDRVYAIVRDMTA 178

Query: 1115 AGLGLNKYCYAGLIDAHRNANPRPTDAAAKILELVEQSKGWSAVEGSRNVAENVMMGITE 936
            AGLGLN++CYAGLI AH+N  P P D AAK++E VE+SK WS+VE +   AENVMMG+++
Sbjct: 179  AGLGLNEFCYAGLIVAHKNKTPLPDDFAAKVIEFVERSKMWSSVETNSANAENVMMGVSD 238

Query: 935  EALYCMPTAEYVHRRGGFVDKRLTVYHVAFYAFADLKNVEAMEALLDMLSKEDKSPDGFI 756
            E LY +PTAEY HRRGGFV ++ T YH AF+A ADLKNVE  + LL+ML+K+ K+PD FI
Sbjct: 239  EELYSLPTAEYAHRRGGFVVRQFTAYHTAFHAAADLKNVELTDTLLEMLNKQGKTPDIFI 298

Query: 755  TWHMIRCYGNSGDIEKGLKVFKDYINSGKTPAIELYVALVEGAMIGYTERGMQIAEETLV 576
               +IRCY ++GDIE+GL+ F++++   ++   EL+V L EGAM+GYTE+GMQ+A++ LV
Sbjct: 299  LMQVIRCYCHAGDIERGLQNFENHLRQDRSVPAELFVTLAEGAMVGYTEKGMQMAQDILV 358

Query: 575  KVNSRGFFLSPKMGSELLMAASGEKTGGYTTANLLWDMMQASKIVPTLTAVEAYHNGLKE 396
            ++N R  FL+ K+GSELL  A+GEKTGGY TAN +WD+MQA  I P+  AVEAY+ GLK+
Sbjct: 359  RMNERNIFLNNKLGSELLFTAAGEKTGGYITANYIWDLMQARGITPSFPAVEAYYQGLKD 418

Query: 395  REIPADDPRLLHVTKILDNLRRRF 324
            REIP DDPRL+ V++I  NL  RF
Sbjct: 419  REIPEDDPRLVLVSRIHKNLSVRF 442