BLASTX nr result

ID: Lithospermum22_contig00016826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016826
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABC01900.1| RRM-containing RNA-binding protein-like protein [...   182   3e-44
gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [...   182   3e-44
gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum]    182   3e-44
ref|XP_004144722.1| PREDICTED: zinc finger CCCH domain-containin...   180   1e-43
ref|XP_003601302.1| Zinc finger CCCH domain-containing protein [...   179   2e-43

>gb|ABC01900.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
          Length = 487

 Score =  182 bits (461), Expect = 3e-44
 Identities = 81/83 (97%), Positives = 82/83 (98%)
 Frame = +3

Query: 102 MAHRLLRDVESDGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR 281
           MAHRLLRD E+DGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDAEADGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR 60

Query: 282 DARYKKSEICQTCSKLKNVCQVC 350
           DARYKKSEICQTCSKLKNVCQVC
Sbjct: 61  DARYKKSEICQTCSKLKNVCQVC 83


>gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
          Length = 462

 Score =  182 bits (461), Expect = 3e-44
 Identities = 81/83 (97%), Positives = 82/83 (98%)
 Frame = +3

Query: 102 MAHRLLRDVESDGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR 281
           MAHRLLRD E+DGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDAEADGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR 60

Query: 282 DARYKKSEICQTCSKLKNVCQVC 350
           DARYKKSEICQTCSKLKNVCQVC
Sbjct: 61  DARYKKSEICQTCSKLKNVCQVC 83


>gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum]
          Length = 479

 Score =  182 bits (461), Expect = 3e-44
 Identities = 81/83 (97%), Positives = 82/83 (98%)
 Frame = +3

Query: 102 MAHRLLRDVESDGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR 281
           MAHRLLRD E+DGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDAEADGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR 60

Query: 282 DARYKKSEICQTCSKLKNVCQVC 350
           DARYKKSEICQTCSKLKNVCQVC
Sbjct: 61  DARYKKSEICQTCSKLKNVCQVC 83


>ref|XP_004144722.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
           [Cucumis sativus] gi|449525922|ref|XP_004169965.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           40-like [Cucumis sativus]
          Length = 517

 Score =  180 bits (456), Expect = 1e-43
 Identities = 79/83 (95%), Positives = 83/83 (100%)
 Frame = +3

Query: 102 MAHRLLRDVESDGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR 281
           MAHRLLRD+E+DGWERSDFPIICESCLGD+PYVRMTKADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60

Query: 282 DARYKKSEICQTCSKLKNVCQVC 350
           DARYKK+EICQTCSKLKNVCQVC
Sbjct: 61  DARYKKTEICQTCSKLKNVCQVC 83


>ref|XP_003601302.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355490350|gb|AES71553.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 492

 Score =  179 bits (454), Expect = 2e-43
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +3

Query: 102 MAHRLLRDVESDGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR 281
           MAHRLLRD E+DGWERSDFPIICESCLGDSPYVRMTKA+YDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR 60

Query: 282 DARYKKSEICQTCSKLKNVCQVC 350
           DARYKKSEICQTCSKLKNVCQVC
Sbjct: 61  DARYKKSEICQTCSKLKNVCQVC 83


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