BLASTX nr result

ID: Lithospermum22_contig00016782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016782
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA20425.1| B-type cyclin [Nicotiana tabacum]                      96   3e-18
dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]                    90   2e-16
dbj|BAA20413.1| B-type cyclin [Catharanthus roseus]                    90   2e-16
ref|XP_002283152.1| PREDICTED: G2/mitotic-specific cyclin S13-6 ...    89   5e-16
dbj|BAE72072.1| Cyclin B1-4 [Daucus carota]                            80   1e-13

>dbj|BAA20425.1| B-type cyclin [Nicotiana tabacum]
          Length = 446

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 66/159 (41%), Positives = 84/159 (52%), Gaps = 4/159 (2%)
 Frame = +2

Query: 62  EAVPKGLKNNNMVGGEGGKNRRALGDIGNLVTNIHVVDGKPIPQASRPVTRSFXXXXXXX 241
           EAVP  LK  NM     G+NR+ALGDIGN +  +  V+GKP+PQ  RP+TR F       
Sbjct: 14  EAVPGALKQKNMAAAAQGRNRKALGDIGNNMVTVRGVEGKPLPQ--RPITRGF--CAQLL 69

Query: 242 XXXXXXXXXXXXXXXVKLDAPVVK----AVRGXXXXXXXXXXXXXXXXEVIEISPDTEEI 409
                          V  DAP+V      V+G                +VIEISPDTEE 
Sbjct: 70  ANAQAAAENQKKSMVVNGDAPIVAKGVLPVKGAAKKPVQKKAAVKPKPDVIEISPDTEE- 128

Query: 410 KIERNQANKKSCSDVSARKQAPTLSATLTARSKAAGGLS 526
           +++ N+  KK+  D S +K   TL++TLTARSKAA GLS
Sbjct: 129 QVKENKQKKKAGDDSSVKK--ATLTSTLTARSKAACGLS 165


>dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]
          Length = 436

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 64/158 (40%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
 Frame = +2

Query: 62  EAVPKGLKNNNMVGGEGGKNRRALGDIGNLVTNIHVVDGKPIPQASRPVTRSFXXXXXXX 241
           +A P G+K  NM G   GK RRALGDIGNLVT +  V+GKP+PQ SRP+TRSF       
Sbjct: 15  DAAPAGMKQKNMAGE--GKIRRALGDIGNLVT-VRGVEGKPLPQVSRPITRSFCAQLLAN 71

Query: 242 XXXXXXXXXXXXXXXVKLDAPVVKAV--RGXXXXXXXXXXXXXXXXE-VIEISPDTEEIK 412
                          V +D      +  +G                E VIEIS D+E++K
Sbjct: 72  AQAAAVAENNKKCKAVNVDGAADGGIIPKGARKPAQKKAATIKPKPEAVIEISSDSEQVK 131

Query: 413 IERNQANKKSCSDVSARKQAPTLSATLTARSKAAGGLS 526
            E+            ++K APTL++TLTARSKAA GLS
Sbjct: 132 KEKK----------PSKKDAPTLTSTLTARSKAACGLS 159


>dbj|BAA20413.1| B-type cyclin [Catharanthus roseus]
          Length = 186

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 64/158 (40%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
 Frame = +2

Query: 62  EAVPKGLKNNNMVGGEGGKNRRALGDIGNLVTNIHVVDGKPIPQASRPVTRSFXXXXXXX 241
           +A P G+K  NM G   GK RRALGDIGNLVT +  V+GKP+PQ SRP+TRSF       
Sbjct: 15  DAAPAGMKQKNMAGE--GKIRRALGDIGNLVT-VRGVEGKPLPQVSRPITRSFCAQLLAN 71

Query: 242 XXXXXXXXXXXXXXXVKLDAPVVKAV--RGXXXXXXXXXXXXXXXXE-VIEISPDTEEIK 412
                          V +D      +  +G                E VIEIS D+E++K
Sbjct: 72  AQAAAVAENNKKCKAVNVDGAADGGIIPKGARKPAQKKAATIKPKPEAVIEISSDSEQVK 131

Query: 413 IERNQANKKSCSDVSARKQAPTLSATLTARSKAAGGLS 526
            E+            ++K APTL++TLTARSKAA GLS
Sbjct: 132 KEKK----------PSKKDAPTLTSTLTARSKAACGLS 159


>ref|XP_002283152.1| PREDICTED: G2/mitotic-specific cyclin S13-6 [Vitis vinifera]
           gi|297741679|emb|CBI32811.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 65/165 (39%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
 Frame = +2

Query: 56  GEEAVPKGLKNNNMVGGEGGKNRRALGDIGNLVTNIHVVDGKPIPQASRPVTRSFXXXXX 235
           GE     G +  N  G   G+NRRALGDIGNLVT +  VDGKP PQ SRPVTRSF     
Sbjct: 15  GEALAGDGKQRKN--GAAEGRNRRALGDIGNLVT-VRGVDGKPQPQISRPVTRSFCAQLL 71

Query: 236 XXXXXXXXXXXXXXXXXVKLD-APVV-------KAVRGXXXXXXXXXXXXXXXXEVIEIS 391
                            V +D AP++       KA                   +VIEIS
Sbjct: 72  ANAQAAAAAENNKKAVCVNVDGAPIITDGGAAGKAPVAAKAAAQKKVTIKPKPEQVIEIS 131

Query: 392 PDTEEIKIERNQANKKSCSDVSARKQAPTLSATLTARSKAAGGLS 526
           PD+EE+K E+   +KK   + S++K   T+++ LTARSK A GL+
Sbjct: 132 PDSEEVKQEK-PVSKKKGREGSSKKNVKTMTSILTARSKVACGLT 175


>dbj|BAE72072.1| Cyclin B1-4 [Daucus carota]
          Length = 455

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 9/164 (5%)
 Frame = +2

Query: 62  EAVPKGLKNNNMVGGEGGKNRRALGDIGNLVTNIHVVDGK--PIPQASRPVTRSF----- 220
           EA    +K  NM GGE  +NRRALGDIGNLVT +  +DGK  PIPQASRPVTRSF     
Sbjct: 13  EAAGGAVKPKNMAGGEV-RNRRALGDIGNLVT-VRGIDGKKQPIPQASRPVTRSFCAQLL 70

Query: 221 XXXXXXXXXXXXXXXXXXXXXXVKLDAPVVKAVRGXXXXXXXXXXXXXXXXEVIEISPDT 400
                                 VK    V KA                   +V  ISPDT
Sbjct: 71  ANAQAVEKNKKQRAIVGDGALEVK---HVTKAAVPKAVVHQKKVNVKPKTEDVTVISPDT 127

Query: 401 --EEIKIERNQANKKSCSDVSARKQAPTLSATLTARSKAAGGLS 526
             E+ K+++N   KK+    S  K+    ++TLTARSKAA GL+
Sbjct: 128 EVEDKKVDKNLDKKKATEGSSKEKKGQAFTSTLTARSKAACGLT 171


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