BLASTX nr result

ID: Lithospermum22_contig00016702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016702
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC23030.1| ring H2 zinc finger [Solanum tuberosum]               101   2e-19
ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ...   100   5e-19
ref|XP_002513986.1| zinc finger protein, putative [Ricinus commu...    96   1e-17
ref|XP_003554663.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    95   2e-17
ref|XP_003520817.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    94   3e-17

>dbj|BAC23030.1| ring H2 zinc finger [Solanum tuberosum]
          Length = 154

 Score =  101 bits (251), Expect = 2e-19
 Identities = 71/173 (41%), Positives = 80/173 (46%), Gaps = 6/173 (3%)
 Frame = +2

Query: 311 KFRSHSTGHSLVVPGENLDRXXXXXXXXXXXXXXXXXXXXXXGENLDRFTLRLPEGVRKE 490
           KFRSHSTGHSLVVPGENL                            DR+TLRLPE VRK+
Sbjct: 1   KFRSHSTGHSLVVPGENL----------------------------DRYTLRLPEKVRKD 32

Query: 491 MLNRALLNRNESCVRTLQGEXXXXXXXXXXXXXXXXXXXXXFNTRRIDIPDRGARSDRW- 667
           +++RALLNR  SC  TL                        F  +RID  D  A+SDRW 
Sbjct: 33  VMDRALLNRTRSCAVTLPRHGSTTRGYRAGPGEGSNRGTRSF--KRIDRFDPEAKSDRWF 90

Query: 668 -----AFFTRALSMKSPKEXXXXXXXXXXXXXKSPKTVVKMPSFTCLEPKSSD 811
                 FFTR  SMKSPK               + K  VKMPSF CLEPK  +
Sbjct: 91  LKIAPPFFTRGSSMKSPK--LRADNEEASTSRSNVKVAVKMPSFKCLEPKGDE 141


>ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis
           vinifera] gi|147843962|emb|CAN83712.1| hypothetical
           protein VITISV_011102 [Vitis vinifera]
          Length = 420

 Score =  100 bits (248), Expect = 5e-19
 Identities = 86/245 (35%), Positives = 102/245 (41%), Gaps = 10/245 (4%)
 Frame = +2

Query: 2   ECIDAWLESHVTCPVCRANLAPXXXXXXXXXXXXXXXXXXXXXXXLTIQEQPRND--EVA 175
           ECIDAWL SHVTCPVCRANL                            +    N   EV+
Sbjct: 169 ECIDAWLASHVTCPVCRANLTEPAVPTDYSAAVEAAESAGESDHDGEDRRSEINAVREVS 228

Query: 176 IRV-DSQEDQNARPEVENPALVRIGSLNRG-PPRSFSIRKSKMFSFAKFRSHSTGHSLVV 349
           IRV D + D    P+V NP      SL++  PPRS S R  K       RSHSTGHSL+ 
Sbjct: 229 IRVADDETDVQQAPDVINPNQ----SLHQNRPPRSKSTRPRKFP-----RSHSTGHSLIQ 279

Query: 350 PGENLDRXXXXXXXXXXXXXXXXXXXXXXGENLDRFTLRLPEGVRKEMLNRALLNRNESC 529
           PGEN +R                            FTL+LPE VRK+++ RAL       
Sbjct: 280 PGENCER----------------------------FTLKLPEDVRKQIMKRALNRTTSLL 311

Query: 530 VRTLQGEXXXXXXXXXXXXXXXXXXXXXFNTRRIDIPDRGARSDRWA------FFTRALS 691
           V    G                       N RR D  +R  +SDRW       FF+RA S
Sbjct: 312 VLPRDGSSRQGYRTAGEGSSRGK------NFRRFDRLERSGKSDRWTFSITPPFFSRASS 365

Query: 692 MKSPK 706
           +KSPK
Sbjct: 366 LKSPK 370


>ref|XP_002513986.1| zinc finger protein, putative [Ricinus communis]
           gi|223547072|gb|EEF48569.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 436

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 75/188 (39%), Positives = 93/188 (49%), Gaps = 11/188 (5%)
 Frame = +2

Query: 2   ECIDAWLESHVTCPVCRANLAPXXXXXXXXXXXXXXXXXXXXXXXLTIQEQPR-NDE--- 169
           +CIDAWL S+ TCPVCRANL P                          Q Q R NDE   
Sbjct: 165 DCIDAWLASNTTCPVCRANLVPKPGDLAFDSVSFFEPNNTNNTSVEPDQLQERPNDETQN 224

Query: 170 -VAIRVDSQEDQNARPEVEN---PALVRIGSLNRG-PPRSFSI--RKSKMFSFAKFRSHS 328
            V IRV    D+ +RPEV+N   P ++ + + ++  PPRS+S   R +++F     RSHS
Sbjct: 225 GVLIRVSDDHDR-SRPEVQNQQSPDVISLSTASQNRPPRSWSTGWRFARLFP----RSHS 279

Query: 329 TGHSLVVPGENLDRXXXXXXXXXXXXXXXXXXXXXXGENLDRFTLRLPEGVRKEMLNRAL 508
           TGHSLV PGE                            NLDRFTLRLPE VR ++LN   
Sbjct: 280 TGHSLVQPGE----------------------------NLDRFTLRLPEDVRSQLLN-TH 310

Query: 509 LNRNESCV 532
           LNR +SCV
Sbjct: 311 LNRAKSCV 318


>ref|XP_003554663.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
          Length = 375

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 79/242 (32%), Positives = 99/242 (40%), Gaps = 7/242 (2%)
 Frame = +2

Query: 2   ECIDAWLESHVTCPVCRANLAPXXXXXXXXXXXXXXXXXXXXXXXLTIQEQPRNDEVAIR 181
           ECID WL SH TCPVCRANL P                         I+ Q  ND V   
Sbjct: 145 ECIDEWLGSHTTCPVCRANLVPTDSEDAIANGNANGVVPVPETFTRDIEAQ--NDAVE-A 201

Query: 182 VDSQEDQNARPEVENPALVRIG-SLNRGPPRSFSIRKSKMFSFAKFRSHSTGHSLVVPGE 358
              Q++  A P +  P +V +  +LNR   R     + + F     RSHSTGHSLV PG 
Sbjct: 202 APEQQNAEADPVLPEPEVVSLDKTLNRNRTRGSRSNRPRRFP----RSHSTGHSLVQPG- 256

Query: 359 NLDRXXXXXXXXXXXXXXXXXXXXXXGENLDRFTLRLPEGVRKEMLNRALLNRNESCVRT 538
                                      EN DRFTLRLP  VRK+++NR L   +   V  
Sbjct: 257 ---------------------------ENTDRFTLRLPLEVRKQLINRQLQRASSLIVLP 289

Query: 539 LQGEXXXXXXXXXXXXXXXXXXXXXFNTRRIDIPDRGARSDRW------AFFTRALSMKS 700
            +G                        +RR+   DR  +SDRW       FF RALS++S
Sbjct: 290 REGSLRQGYRTGGEGSSRGKI------SRRL---DRSLKSDRWIFSMAAPFFARALSIRS 340

Query: 701 PK 706
           P+
Sbjct: 341 PR 342


>ref|XP_003520817.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
          Length = 366

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 78/242 (32%), Positives = 99/242 (40%), Gaps = 7/242 (2%)
 Frame = +2

Query: 2   ECIDAWLESHVTCPVCRANLAPXXXXXXXXXXXXXXXXXXXXXXXLTIQEQPRNDEVAIR 181
           ECID WL SH TCPVCRANL P                         I+ Q  ND V   
Sbjct: 137 ECIDEWLSSHTTCPVCRANLLPTESEDAIANANANGVVPVPETLTRDIESQ--NDAVQ-A 193

Query: 182 VDSQEDQNARPEVENPALVRIG-SLNRGPPRSFSIRKSKMFSFAKFRSHSTGHSLVVPGE 358
              Q++  A P +  P +V +  +LNR   R     + + F     RSHSTGHSLV PG 
Sbjct: 194 APEQQNAEADPVLPEPEVVSLDKTLNRNRTRGSRSNRPRRFP----RSHSTGHSLVQPG- 248

Query: 359 NLDRXXXXXXXXXXXXXXXXXXXXXXGENLDRFTLRLPEGVRKEMLNRALLNRNESCVRT 538
                                      EN DRFTL+LP  VRK+++NR L   +   V  
Sbjct: 249 ---------------------------ENTDRFTLKLPLEVRKQLINRQLQRASSLIVLP 281

Query: 539 LQGEXXXXXXXXXXXXXXXXXXXXXFNTRRIDIPDRGARSDRW------AFFTRALSMKS 700
            +G                        +RR+   DR  +SDRW       FF RALS++S
Sbjct: 282 REGSSRQGYRTGGEGSSRGKI------SRRL---DRSLKSDRWIFSMTAPFFARALSIRS 332

Query: 701 PK 706
           P+
Sbjct: 333 PR 334


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