BLASTX nr result

ID: Lithospermum22_contig00016692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016692
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interactin...   146   1e-33
ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interactin...   146   1e-33
emb|CAN60229.1| hypothetical protein VITISV_042496 [Vitis vinifera]   146   1e-33
ref|XP_002306239.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002309903.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31

>ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 2
           [Vitis vinifera]
          Length = 500

 Score =  146 bits (369), Expect = 1e-33
 Identities = 68/94 (72%), Positives = 82/94 (87%)
 Frame = -1

Query: 383 SVHSWVSSVAVCPSSDLAASGAGNGTIRLWAIENESKGINPLFELPLVGFVNSLVFAKSG 204
           + +SWVSSV VC SSDLAASGA NG++RLWAI +E+K I PLF LPLVGFVNSL F+KSG
Sbjct: 407 TAYSWVSSVTVCRSSDLAASGAANGSVRLWAIGSETKDIRPLFNLPLVGFVNSLAFSKSG 466

Query: 203 KFLIAGVGQEPRLGRWGKIPKARNNVSIHTLKLS 102
           +FL+AGVGQEPRLGRWG++P ARN V++ +LKLS
Sbjct: 467 QFLVAGVGQEPRLGRWGRLPAARNGVAVQSLKLS 500


>ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 1
           [Vitis vinifera] gi|297740813|emb|CBI30995.3| unnamed
           protein product [Vitis vinifera]
          Length = 519

 Score =  146 bits (369), Expect = 1e-33
 Identities = 68/94 (72%), Positives = 82/94 (87%)
 Frame = -1

Query: 383 SVHSWVSSVAVCPSSDLAASGAGNGTIRLWAIENESKGINPLFELPLVGFVNSLVFAKSG 204
           + +SWVSSV VC SSDLAASGA NG++RLWAI +E+K I PLF LPLVGFVNSL F+KSG
Sbjct: 426 TAYSWVSSVTVCRSSDLAASGAANGSVRLWAIGSETKDIRPLFNLPLVGFVNSLAFSKSG 485

Query: 203 KFLIAGVGQEPRLGRWGKIPKARNNVSIHTLKLS 102
           +FL+AGVGQEPRLGRWG++P ARN V++ +LKLS
Sbjct: 486 QFLVAGVGQEPRLGRWGRLPAARNGVAVQSLKLS 519


>emb|CAN60229.1| hypothetical protein VITISV_042496 [Vitis vinifera]
          Length = 573

 Score =  146 bits (369), Expect = 1e-33
 Identities = 68/94 (72%), Positives = 82/94 (87%)
 Frame = -1

Query: 383 SVHSWVSSVAVCPSSDLAASGAGNGTIRLWAIENESKGINPLFELPLVGFVNSLVFAKSG 204
           + +SWVSSV VC SSDLAASGA NG++RLWAI +E+K I PLF LPLVGFVNSL F+KSG
Sbjct: 480 TAYSWVSSVTVCRSSDLAASGAANGSVRLWAIGSETKDIRPLFNLPLVGFVNSLAFSKSG 539

Query: 203 KFLIAGVGQEPRLGRWGKIPKARNNVSIHTLKLS 102
           +FL+AGVGQEPRLGRWG++P ARN V++ +LKLS
Sbjct: 540 QFLVAGVGQEPRLGRWGRLPAARNGVAVQSLKLS 573


>ref|XP_002306239.1| predicted protein [Populus trichocarpa] gi|222855688|gb|EEE93235.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/90 (74%), Positives = 74/90 (82%)
 Frame = -1

Query: 374 SWVSSVAVCPSSDLAASGAGNGTIRLWAIENESKGINPLFELPLVGFVNSLVFAKSGKFL 195
           SWVSSV VC  SDLAASGAGNG++RLWA+E   KGI PL++LPL GFVNSL FAKSGKFL
Sbjct: 412 SWVSSVGVCRGSDLAASGAGNGSVRLWAVEGAGKGIRPLYDLPLTGFVNSLAFAKSGKFL 471

Query: 194 IAGVGQEPRLGRWGKIPKARNNVSIHTLKL 105
           +AGVGQEPRLGRWG    ARN V+I  LKL
Sbjct: 472 LAGVGQEPRLGRWGHNSAARNGVAIQQLKL 501


>ref|XP_002309903.1| predicted protein [Populus trichocarpa] gi|222852806|gb|EEE90353.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/90 (74%), Positives = 74/90 (82%)
 Frame = -1

Query: 374 SWVSSVAVCPSSDLAASGAGNGTIRLWAIENESKGINPLFELPLVGFVNSLVFAKSGKFL 195
           SWVSSV VC  SDLAASGAGNG++ LWAIE   KGI PL++LPL+GFVNSL FAKSGKFL
Sbjct: 411 SWVSSVGVCRGSDLAASGAGNGSVHLWAIEGAGKGIRPLYDLPLIGFVNSLAFAKSGKFL 470

Query: 194 IAGVGQEPRLGRWGKIPKARNNVSIHTLKL 105
           +AGVGQEPRLGRWG    ARN V+I  LKL
Sbjct: 471 VAGVGQEPRLGRWGHNSAARNGVAIQRLKL 500


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