BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016688
         (2030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containi...   549   e-153
emb|CBI33534.3| unnamed protein product [Vitis vinifera]              548   e-153
ref|XP_002532468.1| pentatricopeptide repeat-containing protein,...   527   e-147
ref|XP_002301697.1| predicted protein [Populus trichocarpa] gi|2...   513   e-143
ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containi...   490   e-136

>ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Vitis vinifera]
          Length = 502

 Score =  549 bits (1414), Expect = e-153
 Identities = 274/500 (54%), Positives = 354/500 (70%), Gaps = 7/500 (1%)
 Frame = -2

Query: 1906 MGRGRKREYEXXXXXXXXSKIDPNKKTTGSSSQG-------KRPSFVSYLDSPNVPPKVK 1748
            MG+  KR                NK+ + S++         KRPSF +YL++PN+ PKV+
Sbjct: 1    MGKKHKRPNHTASSPPPLHHDHRNKRHSSSTTDSATHHQTPKRPSFPTYLETPNLSPKVR 60

Query: 1747 VLCEIIAQTPSTNVEQVLDDTGIRVSQEDVEQVLKLSYSHPAPSMKFFRWAGFHLNDKHS 1568
            +LCEIIA TPS+ VE+VL DT IRVS EDVE  LKLSY  P  ++KFFRW+G  LND HS
Sbjct: 61   LLCEIIANTPSSTVEEVLHDTAIRVSPEDVEDSLKLSYGFPGSAVKFFRWSGHQLNDNHS 120

Query: 1567 PYAWNLVVDLLGKNCLFDAMWDAIKSLQKGGFLSLATFASVFSSYVSANRVEEATMTFEV 1388
            PY+WNLVVD+LGKN LFDAMWDA+KS++K G LSLATFAS+FSSYV A+RV EA MTF+V
Sbjct: 121  PYSWNLVVDMLGKNFLFDAMWDAVKSMKKQGLLSLATFASIFSSYVIADRVREAIMTFDV 180

Query: 1387 MNQYGVARDIVALNSLLSAMCGDGKTRQAKHFLNTAKDKIRPDMDTYAILLEGFENEKDV 1208
            M QYG  RDIVALNSLLSA+C DG+T QA  FL   +  IRPD DTYAILLEG+E+E + 
Sbjct: 181  MEQYGCPRDIVALNSLLSAICRDGRTVQAAEFLRNVRGLIRPDADTYAILLEGWESEGNC 240

Query: 1207 SGAKVTFSDMVSDIGLDPLNGSAYDSFLTTLIKGREGMLETLKYYDMMRNSGCSPGMKFF 1028
              A+ TF +MV DIG DP N SAYDSFL  L+ G +G  E +K++++MR+  CSPGM+F+
Sbjct: 241  GAARQTFDEMVMDIGWDPGNVSAYDSFLNALLHGPDGRREAMKFFEIMRDRQCSPGMRFY 300

Query: 1027 KFALEECLRKSDAKNAEYLFEAMVGKHRCVPDIEMYNLMIRLHCNLDNFKLVTKLLDEMV 848
            +  L+EC++ SD+K A+ L++ M+ ++ C PD EMYN MI LHC+ DN  +   +LDEMV
Sbjct: 301  RIGLQECVKTSDSKGAQLLWQTMLSRNICRPDTEMYNSMIALHCSCDNIVMARGMLDEMV 360

Query: 847  CNGVFPNADSYNEIFQFLINRRRLNDALPIFTEMLKNECSLSLANCSLAVRVCVNSGDAL 668
            CNG FP++++YN +F+FLI RR+L +A  IF+EM++NEC   L NC+ AVR+ ++ GD  
Sbjct: 361  CNGAFPDSETYNVLFRFLIRRRKLEEAFSIFSEMVQNECVPDLTNCNAAVRIYLDLGDVY 420

Query: 667  LATKVWKYMIETYKSGLEETGNYLVVKLHEINRLPEAVKYAEDMIQRKIKVNXXXXXXXX 488
             A KVWKY+IE + SGLEETGN LV  L + +R+PEAVKYA+DMI R IK+         
Sbjct: 421  KAIKVWKYIIENHDSGLEETGNLLVTGLRDHDRIPEAVKYAKDMIVRGIKLTSSTLSKLK 480

Query: 487  XXXXXXXKRDLYEELLLKWK 428
                   K  +Y+ELL KWK
Sbjct: 481  HALVEVGKGPVYDELLRKWK 500


>emb|CBI33534.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  548 bits (1412), Expect = e-153
 Identities = 267/459 (58%), Positives = 342/459 (74%)
 Frame = -2

Query: 1804 KRPSFVSYLDSPNVPPKVKVLCEIIAQTPSTNVEQVLDDTGIRVSQEDVEQVLKLSYSHP 1625
            KRPSF +YL++PN+ PKV++LCEIIA TPS+ VE+VL DT IRVS EDVE  LKLSY  P
Sbjct: 46   KRPSFPTYLETPNLSPKVRLLCEIIANTPSSTVEEVLHDTAIRVSPEDVEDSLKLSYGFP 105

Query: 1624 APSMKFFRWAGFHLNDKHSPYAWNLVVDLLGKNCLFDAMWDAIKSLQKGGFLSLATFASV 1445
              ++KFFRW+G  LND HSPY+WNLVVD+LGKN LFDAMWDA+KS++K G LSLATFAS+
Sbjct: 106  GSAVKFFRWSGHQLNDNHSPYSWNLVVDMLGKNFLFDAMWDAVKSMKKQGLLSLATFASI 165

Query: 1444 FSSYVSANRVEEATMTFEVMNQYGVARDIVALNSLLSAMCGDGKTRQAKHFLNTAKDKIR 1265
            FSSYV A+RV EA MTF+VM QYG  RDIVALNSLLSA+C DG+T QA  FL   +  IR
Sbjct: 166  FSSYVIADRVREAIMTFDVMEQYGCPRDIVALNSLLSAICRDGRTVQAAEFLRNVRGLIR 225

Query: 1264 PDMDTYAILLEGFENEKDVSGAKVTFSDMVSDIGLDPLNGSAYDSFLTTLIKGREGMLET 1085
            PD DTYAILLEG+E+E +   A+ TF +MV DIG DP N SAYDSFL  L+ G +G  E 
Sbjct: 226  PDADTYAILLEGWESEGNCGAARQTFDEMVMDIGWDPGNVSAYDSFLNALLHGPDGRREA 285

Query: 1084 LKYYDMMRNSGCSPGMKFFKFALEECLRKSDAKNAEYLFEAMVGKHRCVPDIEMYNLMIR 905
            +K++++MR+  CSPGM+F++  L+EC++ SD+K A+ L++ M+ ++ C PD EMYN MI 
Sbjct: 286  MKFFEIMRDRQCSPGMRFYRIGLQECVKTSDSKGAQLLWQTMLSRNICRPDTEMYNSMIA 345

Query: 904  LHCNLDNFKLVTKLLDEMVCNGVFPNADSYNEIFQFLINRRRLNDALPIFTEMLKNECSL 725
            LHC+ DN  +   +LDEMVCNG FP++++YN +F+FLI RR+L +A  IF+EM++NEC  
Sbjct: 346  LHCSCDNIVMARGMLDEMVCNGAFPDSETYNVLFRFLIRRRKLEEAFSIFSEMVQNECVP 405

Query: 724  SLANCSLAVRVCVNSGDALLATKVWKYMIETYKSGLEETGNYLVVKLHEINRLPEAVKYA 545
             L NC+ AVR+ ++ GD   A KVWKY+IE + SGLEETGN LV  L + +R+PEAVKYA
Sbjct: 406  DLTNCNAAVRIYLDLGDVYKAIKVWKYIIENHDSGLEETGNLLVTGLRDHDRIPEAVKYA 465

Query: 544  EDMIQRKIKVNXXXXXXXXXXXXXXXKRDLYEELLLKWK 428
            +DMI R IK+                K  +Y+ELL KWK
Sbjct: 466  KDMIVRGIKLTSSTLSKLKHALVEVGKGPVYDELLRKWK 504


>ref|XP_002532468.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527826|gb|EEF29924.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 510

 Score =  527 bits (1358), Expect = e-147
 Identities = 264/467 (56%), Positives = 340/467 (72%)
 Frame = -2

Query: 1828 TTGSSSQGKRPSFVSYLDSPNVPPKVKVLCEIIAQTPSTNVEQVLDDTGIRVSQEDVEQV 1649
            TT ++   K P+F SYL++PN+ PK+K+LCEIIA+ PS+ VE +LD+TG+ VSQ DVEQV
Sbjct: 42   TTTTAYPNKHPTFPSYLETPNLSPKIKLLCEIIAKIPSSTVETILDETGLYVSQYDVEQV 101

Query: 1648 LKLSYSHPAPSMKFFRWAGFHLNDKHSPYAWNLVVDLLGKNCLFDAMWDAIKSLQKGGFL 1469
            +KLSYS P P++KFFRWAGF L D HSPY+WNLVVDLLGKNCLFDAMWDAIKS++    +
Sbjct: 102  IKLSYSFPGPAVKFFRWAGFRLQDNHSPYSWNLVVDLLGKNCLFDAMWDAIKSMKSKELV 161

Query: 1468 SLATFASVFSSYVSANRVEEATMTFEVMNQYGVARDIVALNSLLSAMCGDGKTRQAKHFL 1289
            SLATFASVF SYV+A RV++A  TFEVMNQYGV RD+VALNSLLSA+C DGKT  A  FL
Sbjct: 162  SLATFASVFGSYVTAGRVKDAIFTFEVMNQYGVVRDVVALNSLLSAICRDGKTVDAVDFL 221

Query: 1288 NTAKDKIRPDMDTYAILLEGFENEKDVSGAKVTFSDMVSDIGLDPLNGSAYDSFLTTLIK 1109
              AK+ I+PD DT+AILLEG+E E ++  ++ TF +MV +IG DP N  AYD+FL TL+ 
Sbjct: 222  FVAKNSIKPDADTFAILLEGWEKELNLVNSRQTFDEMVREIGWDPANTPAYDTFLCTLLM 281

Query: 1108 GREGMLETLKYYDMMRNSGCSPGMKFFKFALEECLRKSDAKNAEYLFEAMVGKHRCVPDI 929
            GR G  E +++ ++M+   C PGM+FF+ A+EECL+ +D + A  ++E M+  +   PDI
Sbjct: 282  GRIGFNEVIEFLEIMKEKRCCPGMRFFRAAIEECLKVNDVRVAGLIWEVMMETNGFRPDI 341

Query: 928  EMYNLMIRLHCNLDNFKLVTKLLDEMVCNGVFPNADSYNEIFQFLINRRRLNDALPIFTE 749
            EMYNLMI L+C  +N  +  + LDEMV NGVFP+  +YN +FQFLI  R+L +A  +F E
Sbjct: 342  EMYNLMISLYCYTNNTDIALRFLDEMVYNGVFPDRQTYNLLFQFLIKSRKLKEASVLFNE 401

Query: 748  MLKNECSLSLANCSLAVRVCVNSGDALLATKVWKYMIETYKSGLEETGNYLVVKLHEINR 569
            M+KNEC  + ANCS AVRV ++S D  +A KVWK MIE Y+  LEETGN L+V+L +++ 
Sbjct: 402  MIKNECLPNQANCSAAVRVFMHSKDPYMAIKVWKCMIENYELDLEETGNLLIVELCDLHM 461

Query: 568  LPEAVKYAEDMIQRKIKVNXXXXXXXXXXXXXXXKRDLYEELLLKWK 428
             PEAVKYAE MI + IKV                K  +YE LL KWK
Sbjct: 462  DPEAVKYAESMIGKGIKVTSPTMEKLKLCLKQARKEFVYERLLRKWK 508


>ref|XP_002301697.1| predicted protein [Populus trichocarpa] gi|222843423|gb|EEE80970.1|
            predicted protein [Populus trichocarpa]
          Length = 499

 Score =  513 bits (1322), Expect = e-143
 Identities = 259/467 (55%), Positives = 342/467 (73%), Gaps = 1/467 (0%)
 Frame = -2

Query: 1819 SSSQGKRPSFVSYLDSPNVPPKVKVLCEIIAQTPSTNVEQVLDDTGIRVSQEDVEQVLKL 1640
            SSS  K+PSF SYL++PN+PP +K+LCEIIA TPS NVE VLD T IRV Q DVEQVLKL
Sbjct: 30   SSSITKKPSFQSYLETPNLPPTIKLLCEIIANTPSHNVESVLDATVIRVKQTDVEQVLKL 89

Query: 1639 SYSHPAPSMKFFRWAGFHLNDKHSPYAWNLVVDLLGKNCLFDAMWDAIKSLQKGGFLSLA 1460
            SYS P  ++KFFRWAG  LNDKHSPY+WNLVVDLLGKN +FDAMW AIKS+++   +SLA
Sbjct: 90   SYSSPGSAVKFFRWAGLQLNDKHSPYSWNLVVDLLGKNSMFDAMWGAIKSMKRENLVSLA 149

Query: 1459 TFASVFSSYVSANRVEEATMTFEVMNQYGVARDIVALNSLLSAMCGDGKTRQAKHFLNTA 1280
            TFASVFSSYV  +RV+EA MTFEVM+QYG  R++VALNSLLSA+C +G+T  A  FL+ A
Sbjct: 150  TFASVFSSYVIVDRVKEAIMTFEVMDQYGCTRNVVALNSLLSAICREGRTFDAVEFLHVA 209

Query: 1279 KDKIRPDMDTYAILLEGFENEKDVSGAKVTFSDMVSDIGLDPLNGSAYDSFLTTLIKGRE 1100
            K++I PD D+YAILLEG+E E +V+ A+ TF+DMVS +G DP N  AYD+FL+TL+ G +
Sbjct: 210  KNRILPDADSYAILLEGWEKEMNVASARTTFADMVSMVGWDPRNVPAYDTFLSTLLMGYD 269

Query: 1099 GMLETLKYYDMMRNSGCSPGMKFFKFALEECLRKSDAKNAEYLFEAMVGKHRCVPDIEMY 920
            G+ E +K++D M++ GC PG+KFF+ ALEECL+ +D + A  ++E +V +    PDI++Y
Sbjct: 270  GLREAMKHFDTMKDRGCFPGVKFFRLALEECLKCNDVRAAMLIWETLVARVGFRPDIQLY 329

Query: 919  NLMIRLHCNLDNFKLVTKLLDEMVCNGVFPNADSYNEIFQFLINRRRLNDALPIFTEMLK 740
            NLMI +HC  +   +  K LDEM+ NGVFP++ +YN +FQ+LI  ++L +A  +  EM+K
Sbjct: 330  NLMIGIHCYDNQTDIANKFLDEMIYNGVFPDSQTYNVLFQYLIKYKKLKEASFVLNEMIK 389

Query: 739  NECSLSLANCSLAVRVCVNSGDALLATKVWKYMIETY-KSGLEETGNYLVVKLHEINRLP 563
            NE   +  NC+ A++  ++S +  +A KVWK M+E Y +S LEE GN LVV+L   + +P
Sbjct: 390  NEFFPNKTNCNAAIKAYMDSKEPYMAIKVWKCMMENYGESDLEEAGNMLVVELRYHHMVP 449

Query: 562  EAVKYAEDMIQRKIKVNXXXXXXXXXXXXXXXKRDLYEELLLKWKHH 422
            EAVKYAE MI++ IK+                K  LYEELL KWK H
Sbjct: 450  EAVKYAEVMIEKGIKLTSSSLSKLKQMLNEEKKPILYEELLRKWKAH 496


>ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Glycine max]
          Length = 485

 Score =  490 bits (1261), Expect = e-136
 Identities = 244/470 (51%), Positives = 324/470 (68%), Gaps = 1/470 (0%)
 Frame = -2

Query: 1828 TTGSSSQGKRP-SFVSYLDSPNVPPKVKVLCEIIAQTPSTNVEQVLDDTGIRVSQEDVEQ 1652
            ++  S   K+P +F S+ D PN+P  +K LC +IA T + +VE  L    I V+  DVE+
Sbjct: 16   SSSPSPISKKPQTFPSFQDIPNLPSNIKSLCHLIATTSAASVEHSLQSAAISVTPHDVEE 75

Query: 1651 VLKLSYSHPAPSMKFFRWAGFHLNDKHSPYAWNLVVDLLGKNCLFDAMWDAIKSLQKGGF 1472
            VLKLSY  P  ++KFFRW+G HLND H+PY+WNLVVD+LGKN  FDAMWDAIKS+ K G 
Sbjct: 76   VLKLSYGFPGQAVKFFRWSGRHLNDNHTPYSWNLVVDILGKNRFFDAMWDAIKSMNKEGL 135

Query: 1471 LSLATFASVFSSYVSANRVEEATMTFEVMNQYGVARDIVALNSLLSAMCGDGKTRQAKHF 1292
            LSLATFASVFSSYV+A+R+ EA M FE+M+ Y V RD+VALNSLLSA+C +G+T  A  +
Sbjct: 136  LSLATFASVFSSYVAADRIREAIMAFEIMDNYCVVRDVVALNSLLSAICSNGRTLDACDY 195

Query: 1291 LNTAKDKIRPDMDTYAILLEGFENEKDVSGAKVTFSDMVSDIGLDPLNGSAYDSFLTTLI 1112
            L  AK  +RPD DTYAIL+EG+E E  V GAK TF++MV +IG DPLN  AYDSFL TL+
Sbjct: 196  LQVAKKLVRPDTDTYAILMEGWEGENGVVGAKETFAEMVIEIGWDPLNVPAYDSFLCTLV 255

Query: 1111 KGREGMLETLKYYDMMRNSGCSPGMKFFKFALEECLRKSDAKNAEYLFEAMVGKHRCVPD 932
            +G +G+LE +K+ D MR+  C PG++F K AL+EC++  D + AE+ +E +V      P 
Sbjct: 256  RGPDGLLEAIKFVDSMRDRRCFPGVRFLKAALDECVKSHDVRTAEFFWEVLVVGKVVQPT 315

Query: 931  IEMYNLMIRLHCNLDNFKLVTKLLDEMVCNGVFPNADSYNEIFQFLINRRRLNDALPIFT 752
             EMYNLMI L C   +     ++LDEMV  G FP+ ++YN +F+FLI  R+L +A  +F 
Sbjct: 316  AEMYNLMIGLCCYRGDTDAARRMLDEMVYQGAFPDVETYNLLFKFLIKGRKLREASVVFA 375

Query: 751  EMLKNECSLSLANCSLAVRVCVNSGDALLATKVWKYMIETYKSGLEETGNYLVVKLHEIN 572
            EM+KNEC     NC  AV+  V+ G+ ++A KVWKY++E YK  LE T N+LVV L ++N
Sbjct: 376  EMVKNECVPEQDNCDAAVKAYVDCGEPVMAIKVWKYLVENYKKDLERTANFLVVGLRDLN 435

Query: 571  RLPEAVKYAEDMIQRKIKVNXXXXXXXXXXXXXXXKRDLYEELLLKWKHH 422
            RLPEAVKYAEDMI R+I+++               +  +YE+LL K K H
Sbjct: 436  RLPEAVKYAEDMIDREIRLSSNTMSKLRQSLIKERREFVYEDLLRKSKSH 485