BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016680
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598017.1| Pentatricopeptide repeat-containing protein ...   226   1e-57
emb|CBI15206.3| unnamed protein product [Vitis vinifera]              223   9e-57
emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]   223   2e-56
ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containi...   222   2e-56
ref|XP_002321528.1| predicted protein [Populus trichocarpa] gi|2...   219   1e-55

>ref|XP_003598017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487065|gb|AES68268.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 479

 Score =  226 bits (577), Expect = 1e-57
 Identities = 107/161 (66%), Positives = 128/161 (79%)
 Frame = +3

Query: 3   DIVTWNTMISAFAMNGYAFRALELFSRMLDEKGVHPDGVTFLGVLCACGHGGMVEDGRRY 182
           ++V+WN MI  FA +G    AL LF+RML E    PD +TFL VLCAC HGG+V++GRRY
Sbjct: 283 NVVSWNVMILGFASHGNGEEALALFTRMLHENVERPDEITFLCVLCACSHGGLVDEGRRY 342

Query: 183 FQSMINKYYIEPTIKHYGCMVDMLGRAGFVAEAYELIISMPMECNAIVYRTLLAACRMHG 362
           F+ M   Y I+PTIKHYGCMVD+LGRAG   EAYELI SMP+ECNAI++RTLLAACR +G
Sbjct: 343 FEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIKSMPVECNAIIWRTLLAACRNYG 402

Query: 363 EVELGEKVRDHLLGVEPEHSSDYVLLANIYASADQWKEMAK 485
            VELGEKVR HL+ +EP+HSSDYVLLAN+YAS  QW EM+K
Sbjct: 403 NVELGEKVRKHLMELEPDHSSDYVLLANMYASTGQWNEMSK 443



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
 Frame = +3

Query: 3   DIVTWNTMISAFAMNGYAFRALELFSRMLDEK----GVHPDGVTFLGVLCACGHGGMVED 170
           ++V+WN++I      G    A++LF++M+ ++     + PD  T +  L ACG  G ++ 
Sbjct: 175 NLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDF 234

Query: 171 GRR---YFQSMINKYYIEPTIKHYGCMVDMLGRAGFVAEAYELIISMPMECNAIVYRTLL 341
           GR+   + +  +N +    +I  +  +VDM  + G V EAYE   +M  + N + +  ++
Sbjct: 235 GRKVHSFVRDGVNSF--GESISVFNALVDMYAKCGAVEEAYETFSNMKRK-NVVSWNVMI 291

Query: 342 AACRMHGEVE 371
                HG  E
Sbjct: 292 LGFASHGNGE 301


>emb|CBI15206.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score =  223 bits (569), Expect = 9e-57
 Identities = 108/161 (67%), Positives = 130/161 (80%)
 Frame = +3

Query: 3   DIVTWNTMISAFAMNGYAFRALELFSRMLDEKGVHPDGVTFLGVLCACGHGGMVEDGRRY 182
           +IV+WNTMI   AM+G+   ALELFS+ML+EK   P+ VTFLGVLCAC HGGMVE+GRRY
Sbjct: 217 NIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGRRY 276

Query: 183 FQSMINKYYIEPTIKHYGCMVDMLGRAGFVAEAYELIISMPMECNAIVYRTLLAACRMHG 362
           F  M   Y I+PTIKHYG MVD+LGRAG V EAY LI SMP+E N+IV+RTLLAACR+HG
Sbjct: 277 FDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIVWRTLLAACRVHG 336

Query: 363 EVELGEKVRDHLLGVEPEHSSDYVLLANIYASADQWKEMAK 485
            +EL E+VR  LL +EP+HSSDYVLLAN+YASA QW ++ +
Sbjct: 337 NLELAEQVRQQLLELEPDHSSDYVLLANMYASAGQWNKVVR 377



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
 Frame = +3

Query: 6   IVTWNTMISAFAMNGYAFRALELFSRMLDEKGVHPDGVTFLGVLCACGHGGMVEDGRRYF 185
           +V WNT+I      G    A+ELF RML + G+ PD  TF+  L AC   G ++ GRR  
Sbjct: 117 LVAWNTIIDCNVYCGRYKEAIELFFRML-QSGLKPDDATFVVTLSACAALGELDIGRR-V 174

Query: 186 QSMINKYYIEPTIKHYGCMVDMLGRAGFVAEAYELIISMPMECNAIVYRTLLAACRMHGE 365
            S I+   +   +     ++DM  + G V  AYE+   M    N + + T++    MHG 
Sbjct: 175 HSCIDHTGLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKMKGR-NIVSWNTMILGLAMHGH 233

Query: 366 ----VELGEKVRDHLLGVEPE 416
               +EL  K+ +  L    E
Sbjct: 234 GDEALELFSKMLEEKLATPNE 254


>emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
          Length = 516

 Score =  223 bits (567), Expect = 2e-56
 Identities = 108/161 (67%), Positives = 130/161 (80%)
 Frame = +3

Query: 3   DIVTWNTMISAFAMNGYAFRALELFSRMLDEKGVHPDGVTFLGVLCACGHGGMVEDGRRY 182
           +IV+WNTMI   AM+G+   ALELFS+ML+EK   P+ VTFLGVLCAC HGGMVE+GRRY
Sbjct: 317 NIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGRRY 376

Query: 183 FQSMINKYYIEPTIKHYGCMVDMLGRAGFVAEAYELIISMPMECNAIVYRTLLAACRMHG 362
           F  M   Y I+PTIKHYG MVD+LGRAG V EAY LI SMP+E N+IV+RTLLAACR+HG
Sbjct: 377 FDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIVWRTLLAACRVHG 436

Query: 363 EVELGEKVRDHLLGVEPEHSSDYVLLANIYASADQWKEMAK 485
            +EL E+VR  LL +EP+HSSDYVLLAN+YASA QW ++ +
Sbjct: 437 NLELAEQVRQXLLELEPDHSSDYVLLANMYASAGQWNKVXR 477



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
 Frame = +3

Query: 6   IVTWNTMISAFAMNGYAFRALELFSRMLDEKGVHPDGVTFLGVLCACGHGGMVEDGRRYF 185
           +V WNT+I      G    A+ELF RML + G+ PD  TF+  L AC   G ++ GRR  
Sbjct: 217 LVAWNTIIDCNVYCGRYKEAIELFFRML-QSGLKPDDATFVVTLSACAALGELDIGRR-V 274

Query: 186 QSMINKYYIEPTIKHYGCMVDMLGRAGFVAEAYELIISMPMECNAIVYRTLLAACRMHGE 365
            S I+   +   +     ++DM  + G V  AYE+   M    N + + T++    MHG 
Sbjct: 275 HSCIDHTGLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKMKGR-NIVSWNTMILGLAMHGH 333

Query: 366 ----VELGEKVRDHLLGVEPE 416
               +EL  K+ +  L    E
Sbjct: 334 GDEALELFSKMLEEKLATPNE 354


>ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Cucumis sativus]
           gi|449477575|ref|XP_004155061.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Cucumis sativus]
          Length = 506

 Score =  222 bits (566), Expect = 2e-56
 Identities = 107/161 (66%), Positives = 127/161 (78%)
 Frame = +3

Query: 3   DIVTWNTMISAFAMNGYAFRALELFSRMLDEKGVHPDGVTFLGVLCACGHGGMVEDGRRY 182
           +IVTWNTMI   A +G A  AL LFS ML E+   PDGVTFL VLCAC +GG VE+GRRY
Sbjct: 321 NIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVTFLAVLCACNYGGKVEEGRRY 380

Query: 183 FQSMINKYYIEPTIKHYGCMVDMLGRAGFVAEAYELIISMPMECNAIVYRTLLAACRMHG 362
           F  M   + I+PT+KHYG MVD+LGRAGFV EAY+LI SMPMECNA+++RTLLAAC+MHG
Sbjct: 381 FDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMECNAVIWRTLLAACQMHG 440

Query: 363 EVELGEKVRDHLLGVEPEHSSDYVLLANIYASADQWKEMAK 485
            VELGE+V  H+L +  +HSSDYVLLAN+YAS+ QW EM K
Sbjct: 441 NVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMIK 481



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 42/151 (27%), Positives = 70/151 (46%)
 Frame = +3

Query: 3   DIVTWNTMISAFAMNGYAFRALELFSRMLDEKGVHPDGVTFLGVLCACGHGGMVEDGRRY 182
           D+V WN +I      G    AL+LF +ML + GV PD  T +  + AC   G ++ G R+
Sbjct: 220 DLVAWNAVIDCHVSCGMYNEALDLFVQML-QSGVEPDEATLVVTISACSALGALDCG-RW 277

Query: 183 FQSMINKYYIEPTIKHYGCMVDMLGRAGFVAEAYELIISMPMECNAIVYRTLLAACRMHG 362
             S +N      TI  +  ++DM  + G V  A E+  ++  + N + + T++     HG
Sbjct: 278 VHSHVNSNDRGKTIAVFNSLIDMYAKCGAVEYAREMFNAVSGK-NIVTWNTMIMGLATHG 336

Query: 363 EVELGEKVRDHLLGVEPEHSSDYVLLANIYA 455
           + E    +  ++L    E       LA + A
Sbjct: 337 DAEDALTLFSNMLAERVETPDGVTFLAVLCA 367


>ref|XP_002321528.1| predicted protein [Populus trichocarpa] gi|222868524|gb|EEF05655.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  219 bits (559), Expect = 1e-55
 Identities = 106/156 (67%), Positives = 125/156 (80%)
 Frame = +3

Query: 9   VTWNTMISAFAMNGYAFRALELFSRMLDEKGVHPDGVTFLGVLCACGHGGMVEDGRRYFQ 188
           VTWNTMI   A +GYA  AL LFS ML++K   PD +TFL VL AC HGGMV+ G R+F 
Sbjct: 256 VTWNTMILGLASHGYANEALALFSNMLEQKLWAPDDITFLVVLSACSHGGMVDKGWRFFD 315

Query: 189 SMINKYYIEPTIKHYGCMVDMLGRAGFVAEAYELIISMPMECNAIVYRTLLAACRMHGEV 368
            M  +Y+I+PTIKHYGCMVD+LGRAGFV EAY LI +MPM+CNAIV+RTLLAACR+HG V
Sbjct: 316 IMKKEYHIQPTIKHYGCMVDILGRAGFVEEAYRLISNMPMQCNAIVWRTLLAACRLHGNV 375

Query: 369 ELGEKVRDHLLGVEPEHSSDYVLLANIYASADQWKE 476
           ELG++VR  LL +EP+HSSDYVLLAN YASA +W E
Sbjct: 376 ELGKQVRKQLLELEPDHSSDYVLLANTYASAGRWNE 411



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/120 (30%), Positives = 61/120 (50%)
 Frame = +3

Query: 3   DIVTWNTMISAFAMNGYAFRALELFSRMLDEKGVHPDGVTFLGVLCACGHGGMVEDGRRY 182
           ++V WN +I      G    ALE+FSRML + G+ PD  TF+ +L AC   G ++ G R+
Sbjct: 153 ELVAWNIIIDCHVSCGKFNEALEMFSRML-KFGIEPDEATFVVILSACSALGALDFG-RW 210

Query: 183 FQSMINKYYIEPTIKHYGCMVDMLGRAGFVAEAYELIISMPMECNAIVYRTLLAACRMHG 362
             S I+        +    ++DM  + G + EA+E+   M  + N + + T++     HG
Sbjct: 211 VHSCISNIGHGCITEVNNSLLDMYAKCGALQEAFEIFNGMNKK-NTVTWNTMILGLASHG 269