BLASTX nr result
ID: Lithospermum22_contig00016663
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00016663
(1869 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containi... 607 0.0
emb|CBI32034.3| unnamed protein product [Vitis vinifera] 583 0.0
ref|XP_002325053.1| predicted protein [Populus trichocarpa] gi|2... 578 0.0
ref|NP_176180.1| pentatricopeptide repeat-containing protein [Ar... 570 0.0
dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana] 570 0.0
>ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 607 bits (1566), Expect(2) = 0.0
Identities = 288/423 (68%), Positives = 346/423 (81%)
Frame = -1
Query: 1275 VFDEMPERSKVSWNVIIDALVQLGEFDEALQRFSEMGELFESDGYTMQSVISACAGVGAL 1096
VFD M ERS VSWNV+IDA V+ GEFD AL F EM + FE DGYT+QS+ +ACAG+G+L
Sbjct: 185 VFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQKFFEPDGYTIQSIANACAGMGSL 244
Query: 1095 YMGMWAHAYVLRNCNYDAKIYVLLNNCLISMYCKCGSWVMAVQVFEGMSTRDLNSWNSMI 916
+GMWAH ++L+ + D VLLN L+ MYCKCGS +A+Q+F M RD+ SWNSMI
Sbjct: 245 SLGMWAHVFLLKKFDADRVNDVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMI 304
Query: 915 LGFAMHGEVDFAFKYFDRMIDEECLMPNSITFVGVLSACSHRGLVSEGRYYFDKMVSEFK 736
LGF+ HGEV A +YF M+ E LMPN+ITFVGVLSAC+H GLVSEGR YFD MV+E+K
Sbjct: 305 LGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYK 364
Query: 735 IKPVLEHFGCLVDLLARAGLIDEALDVLSTMEMKPDAVIWRSILNALCKRNAGVELSEEV 556
IKP LEH+GCLVDLLARAGLIDEALDV+S M M+PD VIWRS+L+A CK+NAGVELSEE+
Sbjct: 365 IKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQNAGVELSEEM 424
Query: 555 ARQVIESEGNVCSGVYVLLSRVYACAHKWNEVGQVRKLMDDKGITKEPGCSSIEVDGVVH 376
AR+V+E+EG VCSGVYVLLSRVYA A +WN+VG VRKLM DKG+ KEPGCSSIE+DGV H
Sbjct: 425 ARRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCSSIEIDGVAH 484
Query: 375 EFFAGDTSHPQREEIYKFLDIVQEKLNLEGYAPDSTQAPMVDEHDGGKGNCLTRHSERFA 196
EFFAGDTSHPQ EEIY LD+++E++ GY+PDS+QAPMVDE GK L HSER A
Sbjct: 485 EFFAGDTSHPQTEEIYSALDVIEERVERVGYSPDSSQAPMVDETIDGKQYSLRLHSERLA 544
Query: 195 IAFGLLNSKPGVPIRVFKNLSICNDCHNVAKLLSKIFNVDIIVRDRIRFHHFTNGSCTCM 16
IAFGLL +KPG+PIR+FKNL +CN+CH V KL+S++FN +IIVRDRIRFHHF +G+C+CM
Sbjct: 545 IAFGLLKTKPGMPIRIFKNLRVCNNCHQVTKLISRVFNREIIVRDRIRFHHFKDGACSCM 604
Query: 15 DYW 7
DYW
Sbjct: 605 DYW 607
Score = 169 bits (427), Expect(2) = 0.0
Identities = 85/167 (50%), Positives = 113/167 (67%)
Frame = -2
Query: 1835 TERAHLLHPLSQCTTVNHLKQXXXXXXXXXXXXXXHSLFIFSKILHFASLKDLNYTSKLF 1656
T LL L+ CT ++ LKQ ++ F++S+ILHF+SL DL Y ++F
Sbjct: 24 THHRRLLLFLNSCTCISQLKQLHAQTIRTTSSHHPNTFFLYSRILHFSSLHDLRYAFRVF 83
Query: 1655 NQIQQPNSFTYNTLIRAYAHSNNKKEQAVLLFKDVLVKGSLVVPDKHTYPFVLKACAYLF 1476
+QI+ PNSF +N LIRA A S ++K+ A+ L+ +L +GS V+ DKHT+PFVLKACAYLF
Sbjct: 84 HQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGS-VMQDKHTFPFVLKACAYLF 142
Query: 1475 ALSEGRQVHAHVLKHGLGSDVYVTNSLVHFYGSCGCLKEARQVFDEM 1335
ALSEG Q+HA +LK G SDVY+ NSLVHFY +C L A+ VFD M
Sbjct: 143 ALSEGEQIHAQILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRM 189
Score = 88.2 bits (217), Expect = 7e-15
Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 7/232 (3%)
Frame = -1
Query: 1278 QVFDEMPERSKVSWNVIIDALVQLGEFDE----ALQRFSEMGELFESDGYTMQSVISACA 1111
+VF ++ + WN +I A + + + R E G + + D +T V+ ACA
Sbjct: 81 RVFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQ-DKHTFPFVLKACA 139
Query: 1110 GVGALYMGMWAHAYVLRNCNYDAKIYVLLNNCLISMYCKCGSWVMAVQVFEGMSTRDLNS 931
+ AL G HA +L+ +D+ +Y+ NN L+ Y C A VF+ MS R L S
Sbjct: 140 YLFALSEGEQIHAQILK-LGFDSDVYI--NNSLVHFYATCDRLDFAKGVFDRMSERSLVS 196
Query: 930 WNSMILGFAMHGEVDFAFKYFDRMIDEECLMPNSITFVGVLSACSHRGLVSEGRYYFDKM 751
WN +I F GE D A F M ++ P+ T + +AC+ G +S G + +
Sbjct: 197 WNVVIDAFVRFGEFDAALNLFGEM--QKFFEPDGYTIQSIANACAGMGSLSLGMWAHVFL 254
Query: 750 VSEF---KIKPVLEHFGCLVDLLARAGLIDEALDVLSTMEMKPDAVIWRSIL 604
+ +F ++ VL + LVD+ + G ++ AL + M K D W S++
Sbjct: 255 LKKFDADRVNDVLLNTS-LVDMYCKCGSLELALQLFHRMP-KRDVTSWNSMI 304
Score = 52.8 bits (125), Expect(2) = 1e-10
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Frame = -2
Query: 1724 LFIFSKILHFASLKD-LNYTSKLFNQIQQPNSFTYNTLIRAYAHSNNKKEQAVLLFKDVL 1548
++I + ++HF + D L++ +F+++ + + ++N +I A+ + + A+ LF ++
Sbjct: 163 VYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFG-EFDAALNLFGEMQ 221
Query: 1547 VKGSLVVPDKHTYPFVLKACAYLFALSEGRQVHAHVLKH---GLGSDVYVTNSLVHFYGS 1377
PD +T + ACA + +LS G H +LK +DV + SLV Y
Sbjct: 222 ---KFFEPDGYTIQSIANACAGMGSLSLGMWAHVFLLKKFDADRVNDVLLNTSLVDMYCK 278
Query: 1376 CGCLKEARQVFDEMP 1332
CG L+ A Q+F MP
Sbjct: 279 CGSLELALQLFHRMP 293
Score = 41.6 bits (96), Expect(2) = 1e-10
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = -1
Query: 1278 QVFDEMPERSKVSWNVIIDALVQLGEFDEALQRFSEM--GELFESDGYTMQSVISACAGV 1105
Q+F MP+R SWN +I GE AL+ F M E + T V+SAC
Sbjct: 287 QLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHG 346
Query: 1104 GALYMGMWAHAYVLRNCNYDAKIYVLLNNCLISMYCKCGSWVMAVQVFEGMSTR-DLNSW 928
G + G + + Y K + CL+ + + G A+ V M R DL W
Sbjct: 347 GLVSEG--RRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIW 404
Query: 927 NSMI 916
S++
Sbjct: 405 RSLL 408
>emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 583 bits (1504), Expect(2) = 0.0
Identities = 282/423 (66%), Positives = 337/423 (79%)
Frame = -1
Query: 1275 VFDEMPERSKVSWNVIIDALVQLGEFDEALQRFSEMGELFESDGYTMQSVISACAGVGAL 1096
VFD M ERS VSWNV+IDA V+ GEFD AL F EM + FE DGYT+QS+ +ACAG+G+L
Sbjct: 185 VFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQKFFEPDGYTIQSIANACAGMGSL 244
Query: 1095 YMGMWAHAYVLRNCNYDAKIYVLLNNCLISMYCKCGSWVMAVQVFEGMSTRDLNSWNSMI 916
+G+ VLLN L+ MYCKCGS +A+Q+F M RD+ SWNSMI
Sbjct: 245 SLGIVND--------------VLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMI 290
Query: 915 LGFAMHGEVDFAFKYFDRMIDEECLMPNSITFVGVLSACSHRGLVSEGRYYFDKMVSEFK 736
LGF+ HGEV A +YF M+ E LMPN+ITFVGVLSAC+H GLVSEGR YFD MV+E+K
Sbjct: 291 LGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYK 350
Query: 735 IKPVLEHFGCLVDLLARAGLIDEALDVLSTMEMKPDAVIWRSILNALCKRNAGVELSEEV 556
IKP LEH+GCLVDLLARAGLIDEALDV+S M M+PD VIWRS+L+A CK+NAGVELSEE+
Sbjct: 351 IKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQNAGVELSEEM 410
Query: 555 ARQVIESEGNVCSGVYVLLSRVYACAHKWNEVGQVRKLMDDKGITKEPGCSSIEVDGVVH 376
AR+V+E+EG VCSGVYVLLSRVYA A +WN+VG VRKLM DKG+ KEPGCSSIE+DGV H
Sbjct: 411 ARRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCSSIEIDGVAH 470
Query: 375 EFFAGDTSHPQREEIYKFLDIVQEKLNLEGYAPDSTQAPMVDEHDGGKGNCLTRHSERFA 196
EFFAGDTSHPQ EEIY LD+++E++ GY+PDS+QAPMVDE GK L HSER A
Sbjct: 471 EFFAGDTSHPQTEEIYSALDVIEERVERVGYSPDSSQAPMVDETIDGKQYSLRLHSERLA 530
Query: 195 IAFGLLNSKPGVPIRVFKNLSICNDCHNVAKLLSKIFNVDIIVRDRIRFHHFTNGSCTCM 16
IAFGLL +KPG+PIR+FKNL +CN+CH V KL+S++FN +IIVRDRIRFHHF +G+C+CM
Sbjct: 531 IAFGLLKTKPGMPIRIFKNLRVCNNCHQVTKLISRVFNREIIVRDRIRFHHFKDGACSCM 590
Query: 15 DYW 7
DYW
Sbjct: 591 DYW 593
Score = 169 bits (427), Expect(2) = 0.0
Identities = 85/167 (50%), Positives = 113/167 (67%)
Frame = -2
Query: 1835 TERAHLLHPLSQCTTVNHLKQXXXXXXXXXXXXXXHSLFIFSKILHFASLKDLNYTSKLF 1656
T LL L+ CT ++ LKQ ++ F++S+ILHF+SL DL Y ++F
Sbjct: 24 THHRRLLLFLNSCTCISQLKQLHAQTIRTTSSHHPNTFFLYSRILHFSSLHDLRYAFRVF 83
Query: 1655 NQIQQPNSFTYNTLIRAYAHSNNKKEQAVLLFKDVLVKGSLVVPDKHTYPFVLKACAYLF 1476
+QI+ PNSF +N LIRA A S ++K+ A+ L+ +L +GS V+ DKHT+PFVLKACAYLF
Sbjct: 84 HQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGS-VMQDKHTFPFVLKACAYLF 142
Query: 1475 ALSEGRQVHAHVLKHGLGSDVYVTNSLVHFYGSCGCLKEARQVFDEM 1335
ALSEG Q+HA +LK G SDVY+ NSLVHFY +C L A+ VFD M
Sbjct: 143 ALSEGEQIHAQILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRM 189
Score = 83.2 bits (204), Expect = 2e-13
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 4/229 (1%)
Frame = -1
Query: 1278 QVFDEMPERSKVSWNVIIDALVQLGEFDE----ALQRFSEMGELFESDGYTMQSVISACA 1111
+VF ++ + WN +I A + + + R E G + + D +T V+ ACA
Sbjct: 81 RVFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQ-DKHTFPFVLKACA 139
Query: 1110 GVGALYMGMWAHAYVLRNCNYDAKIYVLLNNCLISMYCKCGSWVMAVQVFEGMSTRDLNS 931
+ AL G HA +L+ +D+ +Y+ NN L+ Y C A VF+ MS R L S
Sbjct: 140 YLFALSEGEQIHAQILK-LGFDSDVYI--NNSLVHFYATCDRLDFAKGVFDRMSERSLVS 196
Query: 930 WNSMILGFAMHGEVDFAFKYFDRMIDEECLMPNSITFVGVLSACSHRGLVSEGRYYFDKM 751
WN +I F GE D A F M ++ P+ T + +AC+ G +S G +
Sbjct: 197 WNVVIDAFVRFGEFDAALNLFGEM--QKFFEPDGYTIQSIANACAGMGSLSLG------I 248
Query: 750 VSEFKIKPVLEHFGCLVDLLARAGLIDEALDVLSTMEMKPDAVIWRSIL 604
V++ + LVD+ + G ++ AL + M K D W S++
Sbjct: 249 VNDVLLNT------SLVDMYCKCGSLELALQLFHRMP-KRDVTSWNSMI 290
Score = 46.6 bits (109), Expect(2) = 7e-09
Identities = 35/132 (26%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Frame = -2
Query: 1724 LFIFSKILHFASLKD-LNYTSKLFNQIQQPNSFTYNTLIRAYAHSNNKKEQAVLLFKDVL 1548
++I + ++HF + D L++ +F+++ + + ++N +I A+ + + A+ LF ++
Sbjct: 163 VYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFG-EFDAALNLFGEMQ 221
Query: 1547 VKGSLVVPDKHTYPFVLKACAYLFALSEGRQVHAHVLKHGLGSDVYVTNSLVHFYGSCGC 1368
PD +T + ACA + +LS G + +DV + SLV Y CG
Sbjct: 222 ---KFFEPDGYTIQSIANACAGMGSLSLG-----------IVNDVLLNTSLVDMYCKCGS 267
Query: 1367 LKEARQVFDEMP 1332
L+ A Q+F MP
Sbjct: 268 LELALQLFHRMP 279
Score = 41.6 bits (96), Expect(2) = 7e-09
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = -1
Query: 1278 QVFDEMPERSKVSWNVIIDALVQLGEFDEALQRFSEM--GELFESDGYTMQSVISACAGV 1105
Q+F MP+R SWN +I GE AL+ F M E + T V+SAC
Sbjct: 273 QLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHG 332
Query: 1104 GALYMGMWAHAYVLRNCNYDAKIYVLLNNCLISMYCKCGSWVMAVQVFEGMSTR-DLNSW 928
G + G + + Y K + CL+ + + G A+ V M R DL W
Sbjct: 333 GLVSEG--RRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIW 390
Query: 927 NSMI 916
S++
Sbjct: 391 RSLL 394
>ref|XP_002325053.1| predicted protein [Populus trichocarpa] gi|222866487|gb|EEF03618.1|
predicted protein [Populus trichocarpa]
Length = 607
Score = 578 bits (1489), Expect(2) = 0.0
Identities = 277/425 (65%), Positives = 345/425 (81%), Gaps = 2/425 (0%)
Frame = -1
Query: 1275 VFDEMPERSKVSWNVIIDALVQLGEFDEALQRFSEMGE-LFESDGYTMQSVISACAGVGA 1099
VFD+MP+RS VSWN +IDA V GEF+ ALQ F + + FE DGYT+QSVI+ACAG+ A
Sbjct: 183 VFDKMPQRSLVSWNAMIDAFVLFGEFETALQLFVQFQQQFFEPDGYTIQSVINACAGLCA 242
Query: 1098 LYMGMWAHAYVLRNCNYD-AKIYVLLNNCLISMYCKCGSWVMAVQVFEGMSTRDLNSWNS 922
L +GMWAHA++LRNC A+ +VL+NN L+ MYCKCGS +A Q+FEGM D+ SWNS
Sbjct: 243 LSLGMWAHAFLLRNCGVSVARDHVLVNNSLLDMYCKCGSLDIATQIFEGMQKHDVTSWNS 302
Query: 921 MILGFAMHGEVDFAFKYFDRMIDEECLMPNSITFVGVLSACSHRGLVSEGRYYFDKMVSE 742
MILGFAMHG+ + A + F+RMI +PNSITFVGVLSAC+HR +V+EGR YFD MV+E
Sbjct: 303 MILGFAMHGKGELALECFERMIRISRFVPNSITFVGVLSACNHRYMVNEGRKYFDMMVNE 362
Query: 741 FKIKPVLEHFGCLVDLLARAGLIDEALDVLSTMEMKPDAVIWRSILNALCKRNAGVELSE 562
+KI+P LEH+GCLVD+LARAGLIDEAL+++++M MKPD VIWRS+L++ CK+NA VELSE
Sbjct: 363 YKIEPQLEHYGCLVDILARAGLIDEALELVASMPMKPDVVIWRSLLDSCCKKNASVELSE 422
Query: 561 EVARQVIESEGNVCSGVYVLLSRVYACAHKWNEVGQVRKLMDDKGITKEPGCSSIEVDGV 382
+ARQ++ESE SGVYVLLSRVYA A +WN+VG VRKLM + GI KEPGCS IEVDGV
Sbjct: 423 NIARQILESEEADSSGVYVLLSRVYASASRWNDVGLVRKLMTNNGILKEPGCSLIEVDGV 482
Query: 381 VHEFFAGDTSHPQREEIYKFLDIVQEKLNLEGYAPDSTQAPMVDEHDGGKGNCLTRHSER 202
HEFFAGDTSHPQ +EIY+ L++V+E+++ GY PD +QAPMVDE + K + L HSER
Sbjct: 483 THEFFAGDTSHPQTKEIYQVLNVVEERIDSTGYKPDYSQAPMVDELNTSKRDSLRLHSER 542
Query: 201 FAIAFGLLNSKPGVPIRVFKNLSICNDCHNVAKLLSKIFNVDIIVRDRIRFHHFTNGSCT 22
AIA GLLN KPG+PIR+FKNL +C+DCH V L+S+IFNV+IIVRDR+RFHHF +GSC+
Sbjct: 543 LAIALGLLNLKPGMPIRIFKNLRVCDDCHKVTGLISEIFNVEIIVRDRVRFHHFKDGSCS 602
Query: 21 CMDYW 7
CMDYW
Sbjct: 603 CMDYW 607
Score = 173 bits (438), Expect(2) = 0.0
Identities = 89/182 (48%), Positives = 121/182 (66%), Gaps = 6/182 (3%)
Frame = -2
Query: 1859 SPSPPLRTTERAH----LLHPLSQCTTVNHLKQXXXXXXXXXXXXXXHSLFIFSKILHFA 1692
SP P + T++ + LL L++C ++ LKQ +LF++S+ILHF+
Sbjct: 8 SPPPQIVTSKPTNHYNLLLQHLNECKDMSQLKQIHALSLRSTLPNHSTTLFLYSRILHFS 67
Query: 1691 SLKDLNYTSKLFNQIQQPNSFTYNTLIRAYAHSNNK--KEQAVLLFKDVLVKGSLVVPDK 1518
SL DLNY ++F+Q+ PNSF +N LIRA A S + K +A+LL+ +L + S PD
Sbjct: 68 SLHDLNYAYRVFDQVDNPNSFMWNILIRACAQSQSVHLKREAILLYNTMLQRSS-PFPDN 126
Query: 1517 HTYPFVLKACAYLFALSEGRQVHAHVLKHGLGSDVYVTNSLVHFYGSCGCLKEARQVFDE 1338
HT+PFVLKACAYLFAL EG+Q HAH+LK G SDVY+ NSL+HFY SCG L+ A+ VFD+
Sbjct: 127 HTFPFVLKACAYLFALFEGKQAHAHLLKLGFQSDVYINNSLIHFYASCGSLESAKNVFDK 186
Query: 1337 MP 1332
MP
Sbjct: 187 MP 188
Score = 102 bits (254), Expect = 4e-19
Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 8/289 (2%)
Frame = -1
Query: 1278 QVFDEMPERSKVSWNVIIDALVQLGEFD---EALQRFSEMGELFES--DGYTMQSVISAC 1114
+VFD++ + WN++I A Q EA+ ++ M + D +T V+ AC
Sbjct: 77 RVFDQVDNPNSFMWNILIRACAQSQSVHLKREAILLYNTMLQRSSPFPDNHTFPFVLKAC 136
Query: 1113 AGVGALYMGMWAHAYVLRNCNYDAKIYVLLNNCLISMYCKCGSWVMAVQVFEGMSTRDLN 934
A + AL+ G AHA++L+ + + +Y+ NN LI Y CGS A VF+ M R L
Sbjct: 137 AYLFALFEGKQAHAHLLK-LGFQSDVYI--NNSLIHFYASCGSLESAKNVFDKMPQRSLV 193
Query: 933 SWNSMILGFAMHGEVDFAFKYFDRMIDEECLMPNSITFVGVLSACSHRGLVSEGRYYFDK 754
SWN+MI F + GE + A + F + ++ P+ T V++AC+ +S G +
Sbjct: 194 SWNAMIDAFVLFGEFETALQLFVQ-FQQQFFEPDGYTIQSVINACAGLCALSLGMWAHAF 252
Query: 753 MVSEFKIKPVLEHF---GCLVDLLARAGLIDEALDVLSTMEMKPDAVIWRSILNALCKRN 583
++ + +H L+D+ + G +D A + M+ K D W S++
Sbjct: 253 LLRNCGVSVARDHVLVNNSLLDMYCKCGSLDIATQIFEGMQ-KHDVTSWNSMILGFAMHG 311
Query: 582 AGVELSEEVARQVIESEGNVCSGVYVLLSRVYACAHKWNEVGQVRKLMD 436
G EL+ E ++I V + + + + AC H++ V + RK D
Sbjct: 312 KG-ELALECFERMIRISRFVPNSI-TFVGVLSACNHRY-MVNEGRKYFD 357
Score = 58.2 bits (139), Expect = 8e-06
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Frame = -2
Query: 1724 LFIFSKILHF-ASLKDLNYTSKLFNQIQQPNSFTYNTLIRAYAHSNNKKEQAVLLFKDVL 1548
++I + ++HF AS L +F+++ Q + ++N +I A+ + E A+ LF V
Sbjct: 161 VYINNSLIHFYASCGSLESAKNVFDKMPQRSLVSWNAMIDAFVLFG-EFETALQLF--VQ 217
Query: 1547 VKGSLVVPDKHTYPFVLKACAYLFALSEGRQVHAHVLKH-GLG---SDVYVTNSLVHFYG 1380
+ PD +T V+ ACA L ALS G HA +L++ G+ V V NSL+ Y
Sbjct: 218 FQQQFFEPDGYTIQSVINACAGLCALSLGMWAHAFLLRNCGVSVARDHVLVNNSLLDMYC 277
Query: 1379 SCGCLKEARQVFDEM 1335
CG L A Q+F+ M
Sbjct: 278 KCGSLDIATQIFEGM 292
>ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 570 bits (1468), Expect(2) = 0.0
Identities = 271/432 (62%), Positives = 337/432 (78%), Gaps = 8/432 (1%)
Frame = -1
Query: 1278 QVFDEMPERSKVSWNVIIDALVQLGEFDEALQRFSEMGELFESDGYTMQSVISACAGVGA 1099
+VFDEMPERS VSWN +IDALV+ GE+D ALQ F EM FE DGYTMQSV+SACAG+G+
Sbjct: 207 KVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGS 266
Query: 1098 LYMGMWAHAYVLRNCNYDAKIYVLLNNCLISMYCKCGSWVMAVQVFEGMSTRDLNSWNSM 919
L +G WAHA++LR C+ D + VL+ N LI MYCKCGS MA QVF+GM RDL SWN+M
Sbjct: 267 LSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAM 326
Query: 918 ILGFAMHGEVDFAFKYFDRMIDE-ECLMPNSITFVGVLSACSHRGLVSEGRYYFDKMVSE 742
ILGFA HG + A +FDRM+D+ E + PNS+TFVG+L AC+HRG V++GR YFD MV +
Sbjct: 327 ILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 386
Query: 741 FKIKPVLEHFGCLVDLLARAGLIDEALDVLSTMEMKPDAVIWRSILNALCKRNAGVELSE 562
+ I+P LEH+GC+VDL+ARAG I EA+D++ +M MKPDAVIWRS+L+A CK+ A VELSE
Sbjct: 387 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 446
Query: 561 EVARQVI------ESEGNVCSGVYVLLSRVYACAHKWNEVGQVRKLMDDKGITKEPGCSS 400
E+AR +I ES CSG YVLLSRVYA A +WN+VG VRKLM + GI KEPGCSS
Sbjct: 447 EIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSS 506
Query: 399 IEVDGVVHEFFAGDTSHPQREEIYKFLDIVQEKLNLEGYAPDSTQAPMVD-EHDGGKGNC 223
IE++G+ HEFFAGDTSHPQ ++IY+ L ++ ++L GY PD +QAP+VD +DG K
Sbjct: 507 IEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYS 566
Query: 222 LTRHSERFAIAFGLLNSKPGVPIRVFKNLSICNDCHNVAKLLSKIFNVDIIVRDRIRFHH 43
L HSER AIAFGL+N P PIR+FKNL +CNDCH V KL+SK+FN +IIVRDR+RFHH
Sbjct: 567 LRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHH 626
Query: 42 FTNGSCTCMDYW 7
F +GSC+C+DYW
Sbjct: 627 FKDGSCSCLDYW 638
Score = 167 bits (424), Expect(2) = 0.0
Identities = 82/179 (45%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Frame = -2
Query: 1865 ATSPSPPLRTTERAHLLHPLSQCTTVNHLKQXXXXXXXXXXXXXXHSLFIFSKILHFAS- 1689
A+SPS + C+ ++ LKQ +LF++ KIL +S
Sbjct: 36 ASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSS 95
Query: 1688 LKDLNYTSKLFNQIQQPNSFTYNTLIRAYAHSNNKKEQAVLLFKDVLVKGSLVVPDKHTY 1509
D+NY ++F+ I+ +SF +NTLIRA AH ++KE+A +L++ +L +G PDKHT+
Sbjct: 96 FSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESS-PDKHTF 154
Query: 1508 PFVLKACAYLFALSEGRQVHAHVLKHGLGSDVYVTNSLVHFYGSCGCLKEARQVFDEMP 1332
PFVLKACAY+F SEG+QVH ++KHG G DVYV N L+H YGSCGCL AR+VFDEMP
Sbjct: 155 PFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMP 213
Score = 94.4 bits (233), Expect = 1e-16
Identities = 76/274 (27%), Positives = 121/274 (44%), Gaps = 5/274 (1%)
Frame = -1
Query: 1278 QVFDEMPERSKVSWNVIIDALVQ-LGEFDEALQRFSEMGELFES--DGYTMQSVISACAG 1108
+VFD + S WN +I A + +EA + +M E ES D +T V+ ACA
Sbjct: 104 RVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAY 163
Query: 1107 VGALYMGMWAHAYVLRNCNYDAKIYVLLNNCLISMYCKCGSWVMAVQVFEGMSTRDLNSW 928
+ G H ++++ + +YV NN LI +Y CG +A +VF+ M R L SW
Sbjct: 164 IFGFSEGKQVHCQIVKH-GFGGDVYV--NNGLIHLYGSCGCLDLARKVFDEMPERSLVSW 220
Query: 927 NSMILGFAMHGEVDFAFKYFDRMIDEECLMPNSITFVGVLSACSHRGLVSEGRYYFDKMV 748
NSMI GE D A + F M + P+ T VLSAC+ G +S G + ++
Sbjct: 221 NSMIDALVRFGEYDSALQLFREM--QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLL 278
Query: 747 SEFKIKPVLEHF--GCLVDLLARAGLIDEALDVLSTMEMKPDAVIWRSILNALCKRNAGV 574
+ + ++ L+++ + G + A V M+ K D W +++
Sbjct: 279 RKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRAE 337
Query: 573 ELSEEVARQVIESEGNVCSGVYVLLSRVYACAHK 472
E R V + E NV + + AC H+
Sbjct: 338 EAMNFFDRMVDKRE-NVRPNSVTFVGLLIACNHR 370
Score = 58.9 bits (141), Expect = 4e-06
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Frame = -2
Query: 1724 LFIFSKILH-FASLKDLNYTSKLFNQIQQPNSFTYNTLIRAYAHSNNKKEQAVLLFKDVL 1548
+++ + ++H + S L+ K+F+++ + + ++N++I A + + A+ LF+++
Sbjct: 186 VYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFG-EYDSALQLFREMQ 244
Query: 1547 VKGSLVVPDKHTYPFVLKACAYLFALSEGRQVHAHVLKH---GLGSDVYVTNSLVHFYGS 1377
PD +T VL ACA L +LS G HA +L+ + DV V NSL+ Y
Sbjct: 245 RSFE---PDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCK 301
Query: 1376 CGCLKEARQVFDEM 1335
CG L+ A QVF M
Sbjct: 302 CGSLRMAEQVFQGM 315
>dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 570 bits (1468), Expect(2) = 0.0
Identities = 271/432 (62%), Positives = 337/432 (78%), Gaps = 8/432 (1%)
Frame = -1
Query: 1278 QVFDEMPERSKVSWNVIIDALVQLGEFDEALQRFSEMGELFESDGYTMQSVISACAGVGA 1099
+VFDEMPERS VSWN +IDALV+ GE+D ALQ F EM FE DGYTMQSV+SACAG+G+
Sbjct: 198 KVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGS 257
Query: 1098 LYMGMWAHAYVLRNCNYDAKIYVLLNNCLISMYCKCGSWVMAVQVFEGMSTRDLNSWNSM 919
L +G WAHA++LR C+ D + VL+ N LI MYCKCGS MA QVF+GM RDL SWN+M
Sbjct: 258 LSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAM 317
Query: 918 ILGFAMHGEVDFAFKYFDRMIDE-ECLMPNSITFVGVLSACSHRGLVSEGRYYFDKMVSE 742
ILGFA HG + A +FDRM+D+ E + PNS+TFVG+L AC+HRG V++GR YFD MV +
Sbjct: 318 ILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 377
Query: 741 FKIKPVLEHFGCLVDLLARAGLIDEALDVLSTMEMKPDAVIWRSILNALCKRNAGVELSE 562
+ I+P LEH+GC+VDL+ARAG I EA+D++ +M MKPDAVIWRS+L+A CK+ A VELSE
Sbjct: 378 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 437
Query: 561 EVARQVI------ESEGNVCSGVYVLLSRVYACAHKWNEVGQVRKLMDDKGITKEPGCSS 400
E+AR +I ES CSG YVLLSRVYA A +WN+VG VRKLM + GI KEPGCSS
Sbjct: 438 EIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSS 497
Query: 399 IEVDGVVHEFFAGDTSHPQREEIYKFLDIVQEKLNLEGYAPDSTQAPMVD-EHDGGKGNC 223
IE++G+ HEFFAGDTSHPQ ++IY+ L ++ ++L GY PD +QAP+VD +DG K
Sbjct: 498 IEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYS 557
Query: 222 LTRHSERFAIAFGLLNSKPGVPIRVFKNLSICNDCHNVAKLLSKIFNVDIIVRDRIRFHH 43
L HSER AIAFGL+N P PIR+FKNL +CNDCH V KL+SK+FN +IIVRDR+RFHH
Sbjct: 558 LRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHH 617
Query: 42 FTNGSCTCMDYW 7
F +GSC+C+DYW
Sbjct: 618 FKDGSCSCLDYW 629
Score = 167 bits (424), Expect(2) = 0.0
Identities = 82/179 (45%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Frame = -2
Query: 1865 ATSPSPPLRTTERAHLLHPLSQCTTVNHLKQXXXXXXXXXXXXXXHSLFIFSKILHFAS- 1689
A+SPS + C+ ++ LKQ +LF++ KIL +S
Sbjct: 27 ASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSS 86
Query: 1688 LKDLNYTSKLFNQIQQPNSFTYNTLIRAYAHSNNKKEQAVLLFKDVLVKGSLVVPDKHTY 1509
D+NY ++F+ I+ +SF +NTLIRA AH ++KE+A +L++ +L +G PDKHT+
Sbjct: 87 FSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESS-PDKHTF 145
Query: 1508 PFVLKACAYLFALSEGRQVHAHVLKHGLGSDVYVTNSLVHFYGSCGCLKEARQVFDEMP 1332
PFVLKACAY+F SEG+QVH ++KHG G DVYV N L+H YGSCGCL AR+VFDEMP
Sbjct: 146 PFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMP 204
Score = 94.4 bits (233), Expect = 1e-16
Identities = 76/274 (27%), Positives = 121/274 (44%), Gaps = 5/274 (1%)
Frame = -1
Query: 1278 QVFDEMPERSKVSWNVIIDALVQ-LGEFDEALQRFSEMGELFES--DGYTMQSVISACAG 1108
+VFD + S WN +I A + +EA + +M E ES D +T V+ ACA
Sbjct: 95 RVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAY 154
Query: 1107 VGALYMGMWAHAYVLRNCNYDAKIYVLLNNCLISMYCKCGSWVMAVQVFEGMSTRDLNSW 928
+ G H ++++ + +YV NN LI +Y CG +A +VF+ M R L SW
Sbjct: 155 IFGFSEGKQVHCQIVKH-GFGGDVYV--NNGLIHLYGSCGCLDLARKVFDEMPERSLVSW 211
Query: 927 NSMILGFAMHGEVDFAFKYFDRMIDEECLMPNSITFVGVLSACSHRGLVSEGRYYFDKMV 748
NSMI GE D A + F M + P+ T VLSAC+ G +S G + ++
Sbjct: 212 NSMIDALVRFGEYDSALQLFREM--QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLL 269
Query: 747 SEFKIKPVLEHF--GCLVDLLARAGLIDEALDVLSTMEMKPDAVIWRSILNALCKRNAGV 574
+ + ++ L+++ + G + A V M+ K D W +++
Sbjct: 270 RKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRAE 328
Query: 573 ELSEEVARQVIESEGNVCSGVYVLLSRVYACAHK 472
E R V + E NV + + AC H+
Sbjct: 329 EAMNFFDRMVDKRE-NVRPNSVTFVGLLIACNHR 361
Score = 58.9 bits (141), Expect = 4e-06
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Frame = -2
Query: 1724 LFIFSKILH-FASLKDLNYTSKLFNQIQQPNSFTYNTLIRAYAHSNNKKEQAVLLFKDVL 1548
+++ + ++H + S L+ K+F+++ + + ++N++I A + + A+ LF+++
Sbjct: 177 VYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFG-EYDSALQLFREMQ 235
Query: 1547 VKGSLVVPDKHTYPFVLKACAYLFALSEGRQVHAHVLKH---GLGSDVYVTNSLVHFYGS 1377
PD +T VL ACA L +LS G HA +L+ + DV V NSL+ Y
Sbjct: 236 RSFE---PDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCK 292
Query: 1376 CGCLKEARQVFDEM 1335
CG L+ A QVF M
Sbjct: 293 CGSLRMAEQVFQGM 306