BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016647
         (811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW68176.1| hypothetical protein ZEAMMB73_712841 [Zea mays]         61   7e-16
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    77   5e-12
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    75   2e-11
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   1e-10
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta...    72   1e-10

>gb|AFW68176.1| hypothetical protein ZEAMMB73_712841 [Zea mays]
          Length = 269

 Score = 60.8 bits (146), Expect(3) = 7e-16
 Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
 Frame = +1

Query: 52  IKVPP--RVKIFLWKCLHNALPIRDNLARRGMKVEEVCTLCSNARETIFHLLLECPFAKR 225
           +  PP  +++IF W+ LHN LP +  L RR +  +  C +C    E+ FH+ ++CP AK+
Sbjct: 13  LNTPPNSKIRIFSWRVLHNYLPSKQELKRRHILRKNFCEVCGEEGESFFHIAIDCPVAKQ 72

Query: 226 FW 231
           FW
Sbjct: 73  FW 74



 Score = 40.0 bits (92), Expect(3) = 7e-16
 Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
 Frame = +2

Query: 443 LVAEGLAVRDGIKFAFELGYGKIEIESDSKYLIQILQGEVNIPMEIDVVITNILH*SV-- 616
           L +E LA RDG+  A  L   K+ +E D+  L+ +L+ E      I  +   I   SV  
Sbjct: 156 LTSEALAARDGVVLAQMLSMEKVILEVDNSVLVALLRSEEGRRSAIAGLWQEIRERSVVF 215

Query: 617 -SIDIKFMFTRNDNNNAAHKLAHWNCISEQVSWLINVPSHWLFSTLFVDCN 766
            S D+ F+    + N  AH  A        V + ++   +WL      DCN
Sbjct: 216 RSFDVSFV--NKEGNEVAHICASKAIELASVLFWLDCFPNWLMEAASRDCN 264



 Score = 28.9 bits (63), Expect(3) = 7e-16
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 279 RWSTPAPGHVKLNCDGAWTRLGGKTPVGTLIHWSGGRFL 395
           +W  P  G VK+N D A+    GK   G ++  S G  L
Sbjct: 104 KWKAPLKGWVKINSDAAFVAETGKGARGVVMRNSQGEVL 142


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 30/73 (41%), Positives = 45/73 (61%)
 Frame = +1

Query: 22   VRSWVEGDWKIKVPPRVKIFLWKCLHNALPIRDNLARRGMKVEEVCTLCSNARETIFHLL 201
            V S  +  W +   P+++IFLWK LH A+P+ D L  RG++ ++ C +C    ETI H+L
Sbjct: 1038 VNSLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETINHIL 1097

Query: 202  LECPFAKRFWFST 240
             ECP A++ W  T
Sbjct: 1098 FECPLARQVWAIT 1110


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 31/75 (41%), Positives = 46/75 (61%)
 Frame = +1

Query: 46   WKIKVPPRVKIFLWKCLHNALPIRDNLARRGMKVEEVCTLCSNARETIFHLLLECPFAKR 225
            WK+ VPP++  FLW+C++N L +  NLA R +  E+ C  C +  ET+ HLL +CPFA+ 
Sbjct: 1055 WKLDVPPKIHHFLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARL 1114

Query: 226  FWFSTP*LGTKIGQW 270
             W  +P      G+W
Sbjct: 1115 TWAISPLPAPPGGEW 1129



 Score = 43.1 bits (100), Expect(2) = 2e-06
 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
 Frame = +2

Query: 443  LVAEGLAVRDGIKFAFELGYGKIEIESDSKYLIQILQGEVNIPMEIDVV--ITNILH*SV 616
            L  E  A+R  +       Y ++  ESDS+YL+ ++Q E++IP     +  I N+L    
Sbjct: 1266 LETEVEALRWAVLSLSRFNYRRVIFESDSQYLVSLIQNEMDIPSLAPRIQDIRNLLR--H 1323

Query: 617  SIDIKFMFTRNDNNNAAHKLA 679
              ++KF FTR + NN A + A
Sbjct: 1324 FEEVKFQFTRREGNNVADRTA 1344



 Score = 35.0 bits (79), Expect(2) = 2e-06
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +3

Query: 279  RWSTPAPGHVKLNCDGAWTRLGGKTPVGTLIHWSGGRFL 395
            +W  P+ G VK N DGAW++  G   VG ++    GR L
Sbjct: 1214 KWQPPSHGWVKCNTDGAWSKDLGNCGVGWVLRNHTGRLL 1252


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 27/66 (40%), Positives = 40/66 (60%)
 Frame = +1

Query: 46   WKIKVPPRVKIFLWKCLHNALPIRDNLARRGMKVEEVCTLCSNARETIFHLLLECPFAKR 225
            WK K+PP+VK+F WK +HN L +  N+ +RGM ++  C  C    ET  HL+  C  + R
Sbjct: 1055 WKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSR 1114

Query: 226  FWFSTP 243
             W+ +P
Sbjct: 1115 AWYISP 1120


>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1094

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 26/66 (39%), Positives = 42/66 (63%)
 Frame = +1

Query: 46  WKIKVPPRVKIFLWKCLHNALPIRDNLARRGMKVEEVCTLCSNARETIFHLLLECPFAKR 225
           W +   P++K+FLWK L  A+ + D L  RG+ +E+ C++C    ET+ H+L +CP A++
Sbjct: 776 WNLNSAPKIKVFLWKVLKGAVAVEDRLRTRGVLIEDGCSMCPEKNETLNHILFQCPLARQ 835

Query: 226 FWFSTP 243
            W  TP
Sbjct: 836 VWALTP 841