BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016558
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]      336   4e-90
ref|XP_002510266.1| nuclear acid binding protein, putative [Rici...   322   7e-86
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote...   314   2e-83
ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote...   314   2e-83
ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|2...   313   3e-83

>emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
          Length = 456

 Score =  336 bits (862), Expect = 4e-90
 Identities = 165/198 (83%), Positives = 176/198 (88%), Gaps = 7/198 (3%)
 Frame = -1

Query: 574 GGGSN-------RTIWVGDLLHWMDEDYLRNCFASTGELASVKVIRNKQTGIPEGYGFVE 416
           GGGSN       RTIWVGDLL+WMDEDYLRNCFAST E+AS+KVIRNKQTG  EGYGFVE
Sbjct: 105 GGGSNNNNNNENRTIWVGDLLNWMDEDYLRNCFASTNEVASIKVIRNKQTGFSEGYGFVE 164

Query: 415 FYTHEAAEKVLQTYPRSLMPNADQPFRLNWATFSMGEKRSNNSSDLSIFVGDLAADVTDT 236
           F+TH AAEKVLQTY    MPN DQPFRLNWATFSMG+KR+NN SDLSIFVGDLAADVTDT
Sbjct: 165 FFTHAAAEKVLQTYSCMTMPNVDQPFRLNWATFSMGDKRANNGSDLSIFVGDLAADVTDT 224

Query: 235 LLHETFSSKYNSVKAAKVVMDANTGRSKGYGFVRFGDDNERTQAMADMNGVYCSSRAMRI 56
           LLHETF++KY SVKAAKVV DANTGRSKGYGFVRFGDDNER+QAM +MNGVYCSSR MRI
Sbjct: 225 LLHETFATKYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRI 284

Query: 55  GPATPRKSSGYQQQFSSQ 2
           G ATPRKSSGYQQQ+SSQ
Sbjct: 285 GAATPRKSSGYQQQYSSQ 302


>ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
           gi|223550967|gb|EEF52453.1| nuclear acid binding
           protein, putative [Ricinus communis]
          Length = 443

 Score =  322 bits (825), Expect = 7e-86
 Identities = 152/187 (81%), Positives = 166/187 (88%)
 Frame = -1

Query: 574 GGGSNRTIWVGDLLHWMDEDYLRNCFASTGELASVKVIRNKQTGIPEGYGFVEFYTHEAA 395
           GGG NRT+W+GDL HWMDE+YL  CFASTGE+ S+KVIRNKQTG+ EGYGFVEFYTH  A
Sbjct: 104 GGGENRTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTHATA 163

Query: 394 EKVLQTYPRSLMPNADQPFRLNWATFSMGEKRSNNSSDLSIFVGDLAADVTDTLLHETFS 215
           EKVLQ Y   LMPN +QPFRLNWATFS G+KRS+N+ DLSIFVGDLAADVTD+LLHETF 
Sbjct: 164 EKVLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHETFV 223

Query: 214 SKYNSVKAAKVVMDANTGRSKGYGFVRFGDDNERTQAMADMNGVYCSSRAMRIGPATPRK 35
           S+Y SVKAAKVV DANTGRSKGYGFVRFGDDNERTQAM +MNGVYCSSRAMRIG ATPRK
Sbjct: 224 SRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRAMRIGAATPRK 283

Query: 34  SSGYQQQ 14
           S+GYQ Q
Sbjct: 284 STGYQHQ 290



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 18/203 (8%)
 Frame = -1

Query: 556 TIWVGDLLHWMDEDYLRNCFAST-GELASVKVIRNKQTGIPEGYGFVEF----------- 413
           +I+VGDL   + +  L   F S    + + KV+ +  TG  +GYGFV F           
Sbjct: 203 SIFVGDLAADVTDSLLHETFVSRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMT 262

Query: 412 -----YTHEAAEKVLQTYPRSLMPNADQPFRLNWATFSMGEKRSNNSSDLSIFVGDLAAD 248
                Y    A ++    PR       Q   ++        +   +S++ +IFVG L  +
Sbjct: 263 EMNGVYCSSRAMRIGAATPRKSTGYQHQGGYVSNGASGQAFQADGDSTNTTIFVGGLDPN 322

Query: 247 VTDTLLHETFSSKYNSVKAAKVVMDANTGRSKGYGFVRFGDDNERTQAMADMNGVYCSSR 68
           VTD  L + FS +Y  + + K+ +       KG GFV+F   +   +A+  +NG     +
Sbjct: 323 VTDEDLKQPFS-QYGEIVSVKIPV------GKGCGFVQFASRSNAEEALQKLNGTVIGKQ 375

Query: 67  AMRIG-PATPRKSSGYQQQFSSQ 2
            +R+     P      +  F +Q
Sbjct: 376 TVRLSWGRNPANKQQLRSDFGNQ 398


>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Vitis vinifera]
          Length = 409

 Score =  314 bits (804), Expect = 2e-83
 Identities = 151/186 (81%), Positives = 168/186 (90%)
 Frame = -1

Query: 562 NRTIWVGDLLHWMDEDYLRNCFASTGELASVKVIRNKQTGIPEGYGFVEFYTHEAAEKVL 383
           NRTIWVGDL +WMDE+YL +CFA+TGELAS+KVIRNKQTG  EGYGFVEF++H AAEKVL
Sbjct: 83  NRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVL 142

Query: 382 QTYPRSLMPNADQPFRLNWATFSMGEKRSNNSSDLSIFVGDLAADVTDTLLHETFSSKYN 203
           Q Y   LMPN DQPFRLNWATFSMG+KRS+N  DLSIFVGDLA+DV+D+LLHETF+ KY 
Sbjct: 143 QGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYP 202

Query: 202 SVKAAKVVMDANTGRSKGYGFVRFGDDNERTQAMADMNGVYCSSRAMRIGPATPRKSSGY 23
           SVKAAKVV DANTGRSKGYGFVRFGD+NER+QAM +MNGVYCSSR MRIG ATPRKSSGY
Sbjct: 203 SVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGY 262

Query: 22  QQQFSS 5
           QQQ+SS
Sbjct: 263 QQQYSS 268



 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
 Frame = -1

Query: 568 GSNRTIWVGDLLHWMDEDYLRNCFAST-GELASVKVIRNKQTGIPEGYGFVEFYTHEAAE 392
           G + +I+VGDL   + +  L   FA     + + KV+ +  TG  +GYGFV F       
Sbjct: 174 GPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERS 233

Query: 391 KVLQTYPRSLMPNADQPFRLNWAT----------FSMGEKRSNNSSDLSIFVGDLAADVT 242
           + +          + +P R+  AT          +S   +   +S + +IFVG L  +V+
Sbjct: 234 QAMTEMNGVYC--SSRPMRIGAATPRKSSGYQQQYSSHVQSDGDSMNTTIFVGGLDPNVS 291

Query: 241 DTLLHETFSSKYNSVKAAKVVMDANTGRSKGYGFVRFGDDNERTQAMADMNGVYCSSRAM 62
           D  L + FS +Y  + + K+ +       KG GFV+F + N    A+  +NG     + +
Sbjct: 292 DEDLRQPFS-QYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLNGTVIGKQTV 344

Query: 61  RI----GPATPRKSSGYQQQFS 8
           R+     PA  +  + +  Q+S
Sbjct: 345 RLSWGRNPANKQMRADFGNQWS 366


>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Vitis vinifera]
          Length = 418

 Score =  314 bits (804), Expect = 2e-83
 Identities = 151/186 (81%), Positives = 168/186 (90%)
 Frame = -1

Query: 562 NRTIWVGDLLHWMDEDYLRNCFASTGELASVKVIRNKQTGIPEGYGFVEFYTHEAAEKVL 383
           NRTIWVGDL +WMDE+YL +CFA+TGELAS+KVIRNKQTG  EGYGFVEF++H AAEKVL
Sbjct: 83  NRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVL 142

Query: 382 QTYPRSLMPNADQPFRLNWATFSMGEKRSNNSSDLSIFVGDLAADVTDTLLHETFSSKYN 203
           Q Y   LMPN DQPFRLNWATFSMG+KRS+N  DLSIFVGDLA+DV+D+LLHETF+ KY 
Sbjct: 143 QGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYP 202

Query: 202 SVKAAKVVMDANTGRSKGYGFVRFGDDNERTQAMADMNGVYCSSRAMRIGPATPRKSSGY 23
           SVKAAKVV DANTGRSKGYGFVRFGD+NER+QAM +MNGVYCSSR MRIG ATPRKSSGY
Sbjct: 203 SVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGY 262

Query: 22  QQQFSS 5
           QQQ+SS
Sbjct: 263 QQQYSS 268



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
 Frame = -1

Query: 568 GSNRTIWVGDLLHWMDEDYLRNCFAST-GELASVKVIRNKQTGIPEGYGFVEFYTHEAAE 392
           G + +I+VGDL   + +  L   FA     + + KV+ +  TG  +GYGFV F       
Sbjct: 174 GPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERS 233

Query: 391 KVLQTYPRSLMPNADQPFRLNWAT-----------FSMGEKRSNNSS--------DLSIF 269
           + +          + +P R+  AT            S G   SN +S        + +IF
Sbjct: 234 QAMTEMNGVYC--SSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTIF 291

Query: 268 VGDLAADVTDTLLHETFSSKYNSVKAAKVVMDANTGRSKGYGFVRFGDDNERTQAMADMN 89
           VG L  +V+D  L + FS +Y  + + K+ +       KG GFV+F + N    A+  +N
Sbjct: 292 VGGLDPNVSDEDLRQPFS-QYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLN 344

Query: 88  GVYCSSRAMRI----GPATPRKSSGYQQQFS 8
           G     + +R+     PA  +  + +  Q+S
Sbjct: 345 GTVIGKQTVRLSWGRNPANKQMRADFGNQWS 375


>ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|222835427|gb|EEE73862.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score =  313 bits (802), Expect = 3e-83
 Identities = 150/187 (80%), Positives = 164/187 (87%)
 Frame = -1

Query: 574 GGGSNRTIWVGDLLHWMDEDYLRNCFASTGELASVKVIRNKQTGIPEGYGFVEFYTHEAA 395
           G G N+TIW+GDL HWMDE+YL +CF STGE+AS+KVIRNKQTG+ EGYGFVEF TH  A
Sbjct: 88  GSGENKTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEFLTHATA 147

Query: 394 EKVLQTYPRSLMPNADQPFRLNWATFSMGEKRSNNSSDLSIFVGDLAADVTDTLLHETFS 215
           EKVLQ Y   LMPN +QPFRLNWATFS G+KRS+N+ DLSIFVGDLAADVTD+LL ETF 
Sbjct: 148 EKVLQNYGGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLQETFV 207

Query: 214 SKYNSVKAAKVVMDANTGRSKGYGFVRFGDDNERTQAMADMNGVYCSSRAMRIGPATPRK 35
           SKY SVKAAKVV DANTGRSKGYGFVRFGDD+ERTQAM +MNGVYCSSR MRIG ATPRK
Sbjct: 208 SKYPSVKAAKVVFDANTGRSKGYGFVRFGDDSERTQAMTEMNGVYCSSRPMRIGAATPRK 267

Query: 34  SSGYQQQ 14
           SSGYQQQ
Sbjct: 268 SSGYQQQ 274



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
 Frame = -1

Query: 556 TIWVGDLLHWMDEDYLRNCFAST-GELASVKVIRNKQTGIPEGYGFVEFYTHEAAEKVLQ 380
           +I+VGDL   + +  L+  F S    + + KV+ +  TG  +GYGFV F   + +E+   
Sbjct: 187 SIFVGDLAADVTDSLLQETFVSKYPSVKAAKVVFDANTGRSKGYGFVRF--GDDSERTQA 244

Query: 379 TYPRSLMPNADQPFRLNWAT------------------FSMGEKRSNNSSDLSIFVGDLA 254
               + +  + +P R+  AT                   + G +   +S++ +IFVG L 
Sbjct: 245 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQGGYGSNGASAQGFQSDGDSNNTTIFVGGLD 304

Query: 253 ADVTDTLLHETFSSKYNSVKAAKVVMDANTGRSKGYGFVRFGDDNERTQAMADMNGVYCS 74
            +VTD  L + FS +Y  + + K+ +       KG GFV+F + +   +A+  +NG    
Sbjct: 305 PNVTDEDLKQPFS-QYGEIVSVKIPV------GKGCGFVQFANRDNAEEALQKLNGTVIG 357

Query: 73  SRAMRIGPATPRKSSGYQQQFSS 5
            + +R+       +  ++  F S
Sbjct: 358 KQTVRLSWGRNPANKQFRADFGS 380