BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016511
         (2457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containi...   854   0.0  
emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]   852   0.0  
ref|XP_002523895.1| pentatricopeptide repeat-containing protein,...   823   0.0  
ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containi...   786   0.0  
ref|XP_002533225.1| pentatricopeptide repeat-containing protein,...   749   0.0  

>ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein At2g16880-like
            [Vitis vinifera]
          Length = 778

 Score =  854 bits (2206), Expect = 0.0
 Identities = 408/649 (62%), Positives = 519/649 (79%)
 Frame = +1

Query: 40   QLPKPSKALLDTCIAAYCKCGHPFLGVYIFKKMKRLSLKPNLLTVNTLLSALVKYPSTNC 219
            +L  PSKALLDT I AY + G P     IFKKMKRL L+PNLLT NTLL++LV+YPS++ 
Sbjct: 129  RLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHS 188

Query: 220  SIMCRELFNDAVRLGVKLNTNTFSILMKAYCIELKFDDAIGLLKTMGEFGCEPDNVSYNT 399
                RE FNDA++LG+  N NTF+I++  YC+E KF DA+  L  MG++ C PDNV+YNT
Sbjct: 189  VSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNT 248

Query: 400  ILDGLSKKGRLNQVRDLLADMKGRGLVPNRHTYNILVYGYCKMGWLKDAAKILELMTQNN 579
            ILD L KKGRL   RDLL DMK RGL+PNR+TYNILVYGYCKMGWLK+AA ++ELMTQNN
Sbjct: 249  ILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308

Query: 580  VLPDVWTYNVLVNGFCGDGKIEEAFKLLEEIEGLKLFPDIVTYNTLINAFLEKKRSLDAF 759
            +LPDVWTYN+L+NG C +G+IEEAFKL +E+E LKL PD+V+YNTLIN  LE  +  +AF
Sbjct: 309  LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAF 368

Query: 760  ELLEQMKLKGVKPNNSTYNIILKWYCREGKMDEACDNIKRMEEGGFSPDSVTYNTLINGF 939
            +LLE+M  KGVKPN  T+NI++KWYC+EGKMD+A + I +MEE GFSPD VTYNTLING+
Sbjct: 369  KLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGY 428

Query: 940  CRAGKLDVAFRVMNEMTGKGMKPDAVTLNTVLRIFCVERKHDEAYELLNSARKKGYIVDE 1119
            C+AG +  AFR M+EM  K MK D+VTLNT+LR  C E+K +EAY+LL+SARK+GY +DE
Sbjct: 429  CKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488

Query: 1120 VSYGTLIAGYCKDENVEKAMKIWDEMKQKGVIPTVLTYNTIIGGLCKSGKTAEAINKLNE 1299
            VSYGTLI GY KD NV++A+K+WDEMK+K +IP+ +TYN IIGGLC+ GKT +AI+KLNE
Sbjct: 489  VSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNE 548

Query: 1300 LLESGLVPDQITYNTIIHGYCWAGNIEKAFQFHNKMVEHSFKPDIYTCNILLRGLCREMM 1479
            LLESGL+PD+ TYNTI+HGYC  G++EKAFQFHNKMVE+SFKPD++TCNILLRGLC E +
Sbjct: 549  LLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGV 608

Query: 1480 LEKAMKLFNTWISRGKIIDAVTYNTLISALCKDGKLDDAMALVSDMEEKKLGPDIYTCNA 1659
            LEKA+KLFNTW+S+GK ID VTYNTLI++LCK+G+LDDA  L+S+MEEK+LGPD YT NA
Sbjct: 609  LEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNA 668

Query: 1660 VLGALAEAGRTKEAEDIILKVVETGSVHEGTVLSQKGKLQDPPTVESAENSDSGSVVYSE 1839
            ++ AL ++GR +EAE+ + K++E G++ +  +  Q  K +   T E++E SDS SV YSE
Sbjct: 669  IITALTDSGRIREAEEFMSKMLEKGNLPDQVL--QLDKNETVVTSETSEESDSSSVAYSE 726

Query: 1840 QIIEFCAQKKYIEAMQLLKELTAKGATVNRSTYMTLMNGLIKRKKGTMK 1986
             I E C + KY +AM++  E   KG TV++STY+ LM+GLIKR+K   K
Sbjct: 727  WIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISK 775



 Score =  179 bits (454), Expect = 3e-42
 Identities = 120/438 (27%), Positives = 200/438 (45%), Gaps = 9/438 (2%)
 Frame = +1

Query: 679  LKLFPDIVTYN------TLINAFLEKKRSLDAFELLEQMKLKGVKPNNSTYNIILKWYCR 840
            L L P + ++       +L+  F+   R  D    L    L+   P+ +  +  +  Y +
Sbjct: 92   LSLLPSLFSHRKFSDAKSLLLGFIATDRRHD----LHLSILRLTSPSKALLDTAIGAYVQ 147

Query: 841  EGKMDEACDNIKRMEEGGFSPDSVTYNTLINGFCR---AGKLDVAFRVMNEMTGKGMKPD 1011
             G+   A    K+M+     P+ +T NTL+N   R   +  +  +    N+    G+ P+
Sbjct: 148  SGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPN 207

Query: 1012 AVTLNTVLRIFCVERKHDEAYELLNSARKKGYIVDEVSYGTLIAGYCKDENVEKAMKIWD 1191
              T N V+  +C+E K  +A E LN   K     D V+Y T++   CK   +  A  +  
Sbjct: 208  VNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLM 267

Query: 1192 EMKQKGVIPTVLTYNTIIGGLCKSGKTAEAINKLNELLESGLVPDQITYNTIIHGYCWAG 1371
            +MK +G++P   TYN ++ G CK G   EA N +  + ++ L+PD  TYN +I+G C  G
Sbjct: 268  DMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEG 327

Query: 1372 NIEKAFQFHNKMVEHSFKPDIYTCNILLRGLCREMMLEKAMKLFNTWISRGKIIDAVTYN 1551
             IE+AF+  ++M      PD+ + N L+ G      + +A KL      +G   +AVT+N
Sbjct: 328  RIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHN 387

Query: 1552 TLISALCKDGKLDDAMALVSDMEEKKLGPDIYTCNAVLGALAEAGRTKEAEDIILKVVET 1731
             ++   CK+GK+DDA   ++ MEE    PD  T N ++    +AG   EA          
Sbjct: 388  IMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA---------- 437

Query: 1732 GSVHEGTVLSQKGKLQDPPTVESAENSDSGSVVYSEQIIEFCAQKKYIEAMQLLKELTAK 1911
                    + + G+          +N    SV  +  +   C +KK  EA +LL     +
Sbjct: 438  -----FRTMDEMGR----------KNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKR 482

Query: 1912 GATVNRSTYMTLMNGLIK 1965
            G  ++  +Y TL+ G  K
Sbjct: 483  GYFIDEVSYGTLIVGYFK 500


>emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  852 bits (2201), Expect = 0.0
 Identities = 408/649 (62%), Positives = 516/649 (79%)
 Frame = +1

Query: 40   QLPKPSKALLDTCIAAYCKCGHPFLGVYIFKKMKRLSLKPNLLTVNTLLSALVKYPSTNC 219
            +L  PSKALLDT I AY + G P     IFKKMKRL L+PNLLT NTLL++LV+YPS++ 
Sbjct: 129  RLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHS 188

Query: 220  SIMCRELFNDAVRLGVKLNTNTFSILMKAYCIELKFDDAIGLLKTMGEFGCEPDNVSYNT 399
                RE FNDA++LG+  N NTF+I++  YC+E KF DA+  L  MG++ C PDNV+YNT
Sbjct: 189  VSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNT 248

Query: 400  ILDGLSKKGRLNQVRDLLADMKGRGLVPNRHTYNILVYGYCKMGWLKDAAKILELMTQNN 579
            ILD L KKGRL   RDLL DMK RGL+PNR+TYNILVYGYCKMGWLK+AA ++ELMTQNN
Sbjct: 249  ILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308

Query: 580  VLPDVWTYNVLVNGFCGDGKIEEAFKLLEEIEGLKLFPDIVTYNTLINAFLEKKRSLDAF 759
            +LPDVWTYN+L+NG C +G+IEEAFKL +E+E LKL PD+V+YNTLIN  LE  +  +AF
Sbjct: 309  LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAF 368

Query: 760  ELLEQMKLKGVKPNNSTYNIILKWYCREGKMDEACDNIKRMEEGGFSPDSVTYNTLINGF 939
            +LLE+M  KGVKPN  T+NI++KWYC+EGKMD+A + I +MEE GFSPD VTYNTLING+
Sbjct: 369  KLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGY 428

Query: 940  CRAGKLDVAFRVMNEMTGKGMKPDAVTLNTVLRIFCVERKHDEAYELLNSARKKGYIVDE 1119
            C+AG +  AFR M+EM  K MK D+VTLNT+LR  C E+K +EAY+LL+SARK+GY +DE
Sbjct: 429  CKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488

Query: 1120 VSYGTLIAGYCKDENVEKAMKIWDEMKQKGVIPTVLTYNTIIGGLCKSGKTAEAINKLNE 1299
            VSYGTLI GY KD NV++A+K+WDEMK+K +IP+ +TYN IIGGLC+ GKT +AI+KLNE
Sbjct: 489  VSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNE 548

Query: 1300 LLESGLVPDQITYNTIIHGYCWAGNIEKAFQFHNKMVEHSFKPDIYTCNILLRGLCREMM 1479
            LLESGL+PD+ TYNTI+HGYC  G++EKAFQFHNKMVE+SFKPD++TCNILLRGLC E M
Sbjct: 549  LLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGM 608

Query: 1480 LEKAMKLFNTWISRGKIIDAVTYNTLISALCKDGKLDDAMALVSDMEEKKLGPDIYTCNA 1659
            LEKA+KLFNTW+S+GK ID VTYNTLI++LCK+G+LDDA  L+S+MEEK+LGPD YT NA
Sbjct: 609  LEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNA 668

Query: 1660 VLGALAEAGRTKEAEDIILKVVETGSVHEGTVLSQKGKLQDPPTVESAENSDSGSVVYSE 1839
            ++ AL ++GR +EAE+ + K++E G +    +  Q    +   T E++E SDS SV YSE
Sbjct: 669  IITALTDSGRIREAEEFMSKMLEKGXLPXQVL--QLDXNETVVTSETSEESDSSSVAYSE 726

Query: 1840 QIIEFCAQKKYIEAMQLLKELTAKGATVNRSTYMTLMNGLIKRKKGTMK 1986
             I E C + KY +AM++  E   KG TV++STY+ LM+GLIKR+K   K
Sbjct: 727  WIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISK 775



 Score =  180 bits (456), Expect = 2e-42
 Identities = 120/438 (27%), Positives = 200/438 (45%), Gaps = 9/438 (2%)
 Frame = +1

Query: 679  LKLFPDIVTYN------TLINAFLEKKRSLDAFELLEQMKLKGVKPNNSTYNIILKWYCR 840
            L L P + ++       +L+  F+   R  D    L    L+   P+ +  +  +  Y +
Sbjct: 92   LSLLPSLFSHRKFSDAKSLLLGFIATDRRHD----LHLSILRLTSPSKALLDTAIGAYVQ 147

Query: 841  EGKMDEACDNIKRMEEGGFSPDSVTYNTLINGFCR---AGKLDVAFRVMNEMTGKGMKPD 1011
             G+   A    K+M+     P+ +T NTL+N   R   +  +  +    N+    G+ P+
Sbjct: 148  SGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPN 207

Query: 1012 AVTLNTVLRIFCVERKHDEAYELLNSARKKGYIVDEVSYGTLIAGYCKDENVEKAMKIWD 1191
              T N V+  +C+E K  +A E LN   K     D V+Y T++   CK   +  A  +  
Sbjct: 208  VNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLM 267

Query: 1192 EMKQKGVIPTVLTYNTIIGGLCKSGKTAEAINKLNELLESGLVPDQITYNTIIHGYCWAG 1371
            +MK +G++P   TYN ++ G CK G   EA N +  + ++ L+PD  TYN +I+G C  G
Sbjct: 268  DMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEG 327

Query: 1372 NIEKAFQFHNKMVEHSFKPDIYTCNILLRGLCREMMLEKAMKLFNTWISRGKIIDAVTYN 1551
             IE+AF+  ++M      PD+ + N L+ G      + +A KL      +G   +AVT+N
Sbjct: 328  RIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHN 387

Query: 1552 TLISALCKDGKLDDAMALVSDMEEKKLGPDIYTCNAVLGALAEAGRTKEAEDIILKVVET 1731
             ++   CK+GK+DDA   ++ MEE    PD  T N ++    +AG   EA          
Sbjct: 388  IMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA---------- 437

Query: 1732 GSVHEGTVLSQKGKLQDPPTVESAENSDSGSVVYSEQIIEFCAQKKYIEAMQLLKELTAK 1911
                    + + G+          +N    SV  +  +   C +KK  EA +LL     +
Sbjct: 438  -----FRTMDEMGR----------KNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKR 482

Query: 1912 GATVNRSTYMTLMNGLIK 1965
            G  ++  +Y TL+ G  K
Sbjct: 483  GYFIDEVSYGTLIVGYFK 500


>ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536825|gb|EEF38464.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 784

 Score =  823 bits (2125), Expect = 0.0
 Identities = 391/639 (61%), Positives = 508/639 (79%)
 Frame = +1

Query: 58   KALLDTCIAAYCKCGHPFLGVYIFKKMKRLSLKPNLLTVNTLLSALVKYPSTNCSIMCRE 237
            + +LDT I AY  C  P     IF +MKRL LKPNLLT NTL++ALV+YPS     + + 
Sbjct: 139  RVILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKA 198

Query: 238  LFNDAVRLGVKLNTNTFSILMKAYCIELKFDDAIGLLKTMGEFGCEPDNVSYNTILDGLS 417
            +F+D ++LGVK+NTNTF+IL+   CIE K  +AIGL+  M +F C PDNVSYNTILD L 
Sbjct: 199  IFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLC 258

Query: 418  KKGRLNQVRDLLADMKGRGLVPNRHTYNILVYGYCKMGWLKDAAKILELMTQNNVLPDVW 597
            KKG+LN+ RDLL DMK  GL+PNR+T+NILV GYCK+GWLK+AA++++LM QNNVLPDVW
Sbjct: 259  KKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVW 318

Query: 598  TYNVLVNGFCGDGKIEEAFKLLEEIEGLKLFPDIVTYNTLINAFLEKKRSLDAFELLEQM 777
            TYN+L+ G C DGKI+EAF+L +E+E LKL PD+VTYNTLIN   +   SL  FEL+++M
Sbjct: 319  TYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKM 378

Query: 778  KLKGVKPNNSTYNIILKWYCREGKMDEACDNIKRMEEGGFSPDSVTYNTLINGFCRAGKL 957
            + KGVKPN  TYN+++KWY +EGKMD A + +++MEE GFSPD VT+NTLING+C+AG+L
Sbjct: 379  EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRL 438

Query: 958  DVAFRVMNEMTGKGMKPDAVTLNTVLRIFCVERKHDEAYELLNSARKKGYIVDEVSYGTL 1137
              AFR+M+EM+ KG+K ++VTLNT+L   C ERK D+AY+LL+SA K+GY VDEVSYGTL
Sbjct: 439  SEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTL 498

Query: 1138 IAGYCKDENVEKAMKIWDEMKQKGVIPTVLTYNTIIGGLCKSGKTAEAINKLNELLESGL 1317
            I GY KD    +AMK+WDEMK+K +IP+++TYNT+IGGLC SGKT ++I+KLNELLESGL
Sbjct: 499  IMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGL 558

Query: 1318 VPDQITYNTIIHGYCWAGNIEKAFQFHNKMVEHSFKPDIYTCNILLRGLCREMMLEKAMK 1497
            VPD+ TYNTII GYC  G +EKAFQFHNKMV+ SFKPD++TCNILLRGLC E ML+KA+K
Sbjct: 559  VPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALK 618

Query: 1498 LFNTWISRGKIIDAVTYNTLISALCKDGKLDDAMALVSDMEEKKLGPDIYTCNAVLGALA 1677
            LFNTWIS+GK IDAVTYNT+IS LCK+ + ++A  L+++MEEKKLGPD YT NA+L ALA
Sbjct: 619  LFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALA 678

Query: 1678 EAGRTKEAEDIILKVVETGSVHEGTVLSQKGKLQDPPTVESAENSDSGSVVYSEQIIEFC 1857
            +AGR KEAE+ + ++VE G + + T+   K K++   + E+++ SD  SV +SEQI E C
Sbjct: 679  DAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIES--SSETSQESDPNSVTFSEQINELC 736

Query: 1858 AQKKYIEAMQLLKELTAKGATVNRSTYMTLMNGLIKRKK 1974
             Q KY +AM +++E T KG T+++STY++LM GLIKR+K
Sbjct: 737  TQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRK 775



 Score =  181 bits (460), Expect = 6e-43
 Identities = 128/440 (29%), Positives = 205/440 (46%), Gaps = 7/440 (1%)
 Frame = +1

Query: 700  VTYNTLINAFLEKKRSLDAFELLEQMKLKGVKPNNSTYNIILKWYCREGKMDEA------ 861
            V  +T I A++   R   A ++  +MK   +KPN  T N ++    R             
Sbjct: 140  VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI 199

Query: 862  -CDNIKRMEEGGFSPDSVTYNTLINGFCRAGKLDVAFRVMNEMTGKGMKPDAVTLNTVLR 1038
              D IK     G   ++ T+N LI G C   KL  A  ++ +M      PD V+ NT+L 
Sbjct: 200  FSDVIKL----GVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILD 255

Query: 1039 IFCVERKHDEAYELLNSARKKGYIVDEVSYGTLIAGYCKDENVEKAMKIWDEMKQKGVIP 1218
            + C + K +EA +LL   +  G + +  ++  L++GYCK   +++A ++ D M Q  V+P
Sbjct: 256  VLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLP 315

Query: 1219 TVLTYNTIIGGLCKSGKTAEAINKLNELLESGLVPDQITYNTIIHGYCWAGNIEKAFQFH 1398
             V TYN +IGGLCK GK  EA    +E+    L+PD +TYNT+I+G     +  K F+  
Sbjct: 316  DVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELI 375

Query: 1399 NKMVEHSFKPDIYTCNILLRGLCREMMLEKAMKLFNTWISRGKIIDAVTYNTLISALCKD 1578
            +KM     KP+  T N++++   +E  ++ A          G   D VT+NTLI+  CK 
Sbjct: 376  DKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKA 435

Query: 1579 GKLDDAMALVSDMEEKKLGPDIYTCNAVLGALAEAGRTKEAEDIILKVVETGSVHEGTVL 1758
            G+L +A  ++ +M  K L  +  T N +L  L    +  +A  ++               
Sbjct: 436  GRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSA------------ 483

Query: 1759 SQKGKLQDPPTVESAENSDSGSVVYSEQIIEFCAQKKYIEAMQLLKELTAKGATVNRSTY 1938
            S++G   D              V Y   I+ +    K +EAM+L  E+  K    +  TY
Sbjct: 484  SKRGYFVD-------------EVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITY 530

Query: 1939 MTLMNGLIKRKKGTMKVDKM 1998
             T++ GL    K    +DK+
Sbjct: 531  NTMIGGLCHSGKTDQSIDKL 550



 Score =  156 bits (394), Expect = 3e-35
 Identities = 103/369 (27%), Positives = 185/369 (50%), Gaps = 1/369 (0%)
 Frame = +1

Query: 52   PSKALLDTCIAAYCKCGHPFLGVYIFKKMKRLSLKPNLLTVNTLLSALVKYPSTNCSIMC 231
            P     +T I  YCK G       +  +M R  LK N +T+NT+L  L      + +   
Sbjct: 420  PDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAY-- 477

Query: 232  RELFNDAVRLGVKLNTNTFSILMKAYCIELKFDDAIGLLKTMGEFGCEPDNVSYNTILDG 411
             +L + A + G  ++  ++  L+  Y  + K  +A+ L   M E    P  ++YNT++ G
Sbjct: 478  -KLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGG 536

Query: 412  LSKKGRLNQVRDLLADMKGRGLVPNRHTYNILVYGYCKMGWLKDAAKILELMTQNNVLPD 591
            L   G+ +Q  D L ++   GLVP+  TYN ++ GYC+ G ++ A +    M + +  PD
Sbjct: 537  LCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPD 596

Query: 592  VWTYNVLVNGFCGDGKIEEAFKLLEEIEGLKLFPDIVTYNTLINAFLEKKRSLDAFELLE 771
            ++T N+L+ G C +G +++A KL           D VTYNT+I+   ++ R  +AF+LL 
Sbjct: 597  LFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLA 656

Query: 772  QMKLKGVKPNNSTYNIILKWYCREGKMDEACDNIKR-MEEGGFSPDSVTYNTLINGFCRA 948
            +M+ K + P+  TYN IL      G+M EA + + R +E+G     +++ N         
Sbjct: 657  EMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLN--------K 708

Query: 949  GKLDVAFRVMNEMTGKGMKPDAVTLNTVLRIFCVERKHDEAYELLNSARKKGYIVDEVSY 1128
             K++      +  T +   P++VT +  +   C + K+ +A  ++  + +KG  + + +Y
Sbjct: 709  RKIE-----SSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTY 763

Query: 1129 GTLIAGYCK 1155
             +L+ G  K
Sbjct: 764  ISLMEGLIK 772


>ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein At2g16880-like
            [Cucumis sativus] gi|449529106|ref|XP_004171542.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  786 bits (2030), Expect = 0.0
 Identities = 374/655 (57%), Positives = 498/655 (76%)
 Frame = +1

Query: 31   PSSQLPKPSKALLDTCIAAYCKCGHPFLGVYIFKKMKRLSLKPNLLTVNTLLSALVKYPS 210
            P+  LP+PSK LLDT I AY +   P L   IF KMKRL+ +PNLLT NTL+++LV+YPS
Sbjct: 131  PTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPS 190

Query: 211  TNCSIMCRELFNDAVRLGVKLNTNTFSILMKAYCIELKFDDAIGLLKTMGEFGCEPDNVS 390
            ++  ++ R++  D+++LGV  NTN+F+IL+  YC+E K  DA+  +  M EFGC PD VS
Sbjct: 191  SSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVS 250

Query: 391  YNTILDGLSKKGRLNQVRDLLADMKGRGLVPNRHTYNILVYGYCKMGWLKDAAKILELMT 570
            YNTILD L K+  L + RDLL DMK +GL PN+HTYN+LV GYC++G LK+A K++E+MT
Sbjct: 251  YNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMT 310

Query: 571  QNNVLPDVWTYNVLVNGFCGDGKIEEAFKLLEEIEGLKLFPDIVTYNTLINAFLEKKRSL 750
            +NN+LP VWTYN+LVNGFC DGKI+EAF++ +E+E + + PD+VTYNTLI+   + + S 
Sbjct: 311  RNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSS 370

Query: 751  DAFELLEQMKLKGVKPNNSTYNIILKWYCREGKMDEACDNIKRMEEGGFSPDSVTYNTLI 930
            + + L+E+M  KGVK N  TYNIILKW C++G M EA   + +MEE G SPD VTYNTLI
Sbjct: 371  EVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLI 430

Query: 931  NGFCRAGKLDVAFRVMNEMTGKGMKPDAVTLNTVLRIFCVERKHDEAYELLNSARKKGYI 1110
              +C+AGK+  AFR+M+EMT KG+K D  TLNT+L   CVE+K DEAY LL SA K+GYI
Sbjct: 431  GAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYI 490

Query: 1111 VDEVSYGTLIAGYCKDENVEKAMKIWDEMKQKGVIPTVLTYNTIIGGLCKSGKTAEAINK 1290
            +DEVSYG LI GY KDE  ++A+ +WDEMK++ ++P+ +TYN++IGGLC+S K  +AI+K
Sbjct: 491  LDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDK 550

Query: 1291 LNELLESGLVPDQITYNTIIHGYCWAGNIEKAFQFHNKMVEHSFKPDIYTCNILLRGLCR 1470
            LNE+LE+GLVPD+ TYN IIHG+C  GN+EKAFQFHN+M+E+ FKPD+YTCNILLRGLCR
Sbjct: 551  LNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCR 610

Query: 1471 EMMLEKAMKLFNTWISRGKIIDAVTYNTLISALCKDGKLDDAMALVSDMEEKKLGPDIYT 1650
            E MLEKA+KLFNT +S+GK ID VTYNT+IS+LCK+GK ++A  L+++ME KKLGPD YT
Sbjct: 611  EGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYT 670

Query: 1651 CNAVLGALAEAGRTKEAEDIILKVVETGSVHEGTVLSQKGKLQDPPTVESAENSDSGSVV 1830
               ++ AL +AGR KEAE+  LK+VE+G VH+  +  + GK Q+  T E +E+ D  S+ 
Sbjct: 671  YKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNL--KLGKGQNVLTSEVSEHFDFKSIA 728

Query: 1831 YSEQIIEFCAQKKYIEAMQLLKELTAKGATVNRSTYMTLMNGLIKRKKGTMKVDK 1995
            YS+QI E C Q KY +AM L  E+T +G  +N+ TY+ LM GLIKR+K T K  +
Sbjct: 729  YSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRKSTSKASR 783


>ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223526957|gb|EEF29157.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 605

 Score =  749 bits (1933), Expect = 0.0
 Identities = 363/611 (59%), Positives = 476/611 (77%)
 Frame = +1

Query: 136  MKRLSLKPNLLTVNTLLSALVKYPSTNCSIMCRELFNDAVRLGVKLNTNTFSILMKAYCI 315
            MKRL LKPNLLT+NTL+ ALV+YPS     + + +F+D ++LGV++NTNTF+IL+   CI
Sbjct: 1    MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60

Query: 316  ELKFDDAIGLLKTMGEFGCEPDNVSYNTILDGLSKKGRLNQVRDLLADMKGRGLVPNRHT 495
            E K  +AIGL+  M  F C PDNVSYNTILD L KKG+LN+ RDLL DMK  GL PNR+T
Sbjct: 61   ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120

Query: 496  YNILVYGYCKMGWLKDAAKILELMTQNNVLPDVWTYNVLVNGFCGDGKIEEAFKLLEEIE 675
            +NILV GYCK+GWLK+AA+++++M +NNVLPDV TY  L+ G C DGKI+EAF+L +E+E
Sbjct: 121  FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180

Query: 676  GLKLFPDIVTYNTLINAFLEKKRSLDAFELLEQMKLKGVKPNNSTYNIILKWYCREGKMD 855
             LKL P +VTYN LIN   E   SL  FEL+++M+ KGVKPN  TYN+++KWY +EGKMD
Sbjct: 181  NLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMD 240

Query: 856  EACDNIKRMEEGGFSPDSVTYNTLINGFCRAGKLDVAFRVMNEMTGKGMKPDAVTLNTVL 1035
             A + +++MEE GFSPD VT+NTL NG+C+AG+L  AFR+M+EM+ KG+K ++VTLNT+L
Sbjct: 241  NAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTIL 300

Query: 1036 RIFCVERKHDEAYELLNSARKKGYIVDEVSYGTLIAGYCKDENVEKAMKIWDEMKQKGVI 1215
               C ERK D+AY+LL+SA K+GY VDEVSYGTLI GY K   V K+   WDEMK+K +I
Sbjct: 301  HTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFK---VGKS-XXWDEMKEKEII 356

Query: 1216 PTVLTYNTIIGGLCKSGKTAEAINKLNELLESGLVPDQITYNTIIHGYCWAGNIEKAFQF 1395
            P+++TY T+IGGLC+SGKT ++I+K NELLESGLVPDQ TYNTII GYC  G ++KAF F
Sbjct: 357  PSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHF 416

Query: 1396 HNKMVEHSFKPDIYTCNILLRGLCREMMLEKAMKLFNTWISRGKIIDAVTYNTLISALCK 1575
             NKMV+ SFKPD++TCNIL+RGLC E ML+KA+KLF TWIS+GK IDAVT+NT+IS LC+
Sbjct: 417  RNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCE 476

Query: 1576 DGKLDDAMALVSDMEEKKLGPDIYTCNAVLGALAEAGRTKEAEDIILKVVETGSVHEGTV 1755
            +G+ ++A  L+++MEEKKLGPD YT NA+L ALA+AGR KEAE+ +  +VE G + + T+
Sbjct: 477  EGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTI 536

Query: 1756 LSQKGKLQDPPTVESAENSDSGSVVYSEQIIEFCAQKKYIEAMQLLKELTAKGATVNRST 1935
               K K +   + E+++ SD  SV +SEQI E C Q KY +AM +++E T KG  +++ST
Sbjct: 537  SLNKRKTES--SSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKST 594

Query: 1936 YMTLMNGLIKR 1968
            Y++LM GLIKR
Sbjct: 595  YISLMEGLIKR 605



 Score =  257 bits (657), Expect = 9e-66
 Identities = 157/521 (30%), Positives = 258/521 (49%), Gaps = 23/521 (4%)
 Frame = +1

Query: 133  KMKRLSLKPNLLTVNTLLSALVKYPSTNCSIMCRELFNDAVRLGVKLNTNTFSILMKAYC 312
            KMK  S  P+ ++ NT+L  L K    N     R+L  D    G+  N NTF+IL+  YC
Sbjct: 73   KMKHFSCFPDNVSYNTILDVLCKKGKLN---EARDLLLDMKNNGLFPNRNTFNILVSGYC 129

Query: 313  IELKFDDAIGLLKTMGEFGCEPDNVSYNTILDGLSKKGRLNQVRDLLADMKGRGLVPNRH 492
                  +A  ++  M      PD  +Y T++ GL K G++++   L  +M+   L+P+  
Sbjct: 130  KLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVV 189

Query: 493  TYNILVYGYCKMGWLKDAAKILELMTQNNVLPDVWTYNVLVNGFCGDGKIEEAFKLLEEI 672
            TYN+L+ G  +        ++++ M    V P+  TYNV+V  +  +GK++ A   L ++
Sbjct: 190  TYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKM 249

Query: 673  EGLKLFPDIVTYNTLINAFLEKKRSLDAFELLEQMKLKGVKPNNSTYNIILKWYCREGKM 852
            E     PD VT+NTL N + +  R  +AF ++++M  KG+K N+ T N IL   C E K+
Sbjct: 250  EESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKL 309

Query: 853  DEACDNIKRMEEGGFSPDSVTYNTLINGFCRAGKLDVAFRVMNEMTGKGMKPDAVTLNTV 1032
            D+A   +    + G+  D V+Y TLI G+ + GK        +EM  K + P  +T  T+
Sbjct: 310  DDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGK----SXXWDEMKEKEIIPSIITYGTM 365

Query: 1033 LRIFCVERKHDEAYELLNSARKKGYIVDEVSYGTLIAGYCKDENVEKAMKIWDEMKQKGV 1212
            +   C   K D++ +  N   + G + D+ +Y T+I GYC++  V+KA    ++M +K  
Sbjct: 366  IGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSF 425

Query: 1213 IPTVLTYNTIIGGLCKSGKTAEAINKLNELLESGLVPDQITYNTIIHGYCWAGNIEKAFQ 1392
             P + T N ++ GLC  G   +A+      +  G   D +T+NTII G C  G  E+AF 
Sbjct: 426  KPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFD 485

Query: 1393 FHNKMVEHSFKPDIYTCNILLRGLCREMMLEKAMKLFNTWISRGKIID------------ 1536
               +M E    PD YT N +L  L     +++A +  +  + +GK+ D            
Sbjct: 486  LLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTES 545

Query: 1537 -----------AVTYNTLISALCKDGKLDDAMALVSDMEEK 1626
                       +V ++  I+ LC  GK  DAM ++ +  +K
Sbjct: 546  SSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQK 586



 Score =  136 bits (343), Expect = 2e-29
 Identities = 97/368 (26%), Positives = 172/368 (46%)
 Frame = +1

Query: 52   PSKALLDTCIAAYCKCGHPFLGVYIFKKMKRLSLKPNLLTVNTLLSALVKYPSTNCSIMC 231
            P     +T    YCK G       +  +M R  LK N +T+NT+L  L      + +   
Sbjct: 256  PDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAY-- 313

Query: 232  RELFNDAVRLGVKLNTNTFSILMKAYCIELKFDDAIGLLKTMGEFGCEPDNVSYNTILDG 411
             +L + A + G  ++  ++  L+  Y    K          M E    P  ++Y T++ G
Sbjct: 314  -KLLSSASKRGYFVDEVSYGTLIMGYFKVGK----SXXWDEMKEKEIIPSIITYGTMIGG 368

Query: 412  LSKKGRLNQVRDLLADMKGRGLVPNRHTYNILVYGYCKMGWLKDAAKILELMTQNNVLPD 591
            L + G+ +Q  D   ++   GLVP++ TYN ++ GYC+ G +  A      M + +  PD
Sbjct: 369  LCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPD 428

Query: 592  VWTYNVLVNGFCGDGKIEEAFKLLEEIEGLKLFPDIVTYNTLINAFLEKKRSLDAFELLE 771
            ++T N+LV G C +G +++A KL +         D VT+NT+I+   E+ R  +AF+LL 
Sbjct: 429  LFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLA 488

Query: 772  QMKLKGVKPNNSTYNIILKWYCREGKMDEACDNIKRMEEGGFSPDSVTYNTLINGFCRAG 951
            +M+ K + P+  T+N IL      G+M EA + +  + E G   D               
Sbjct: 489  EMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTI------------ 536

Query: 952  KLDVAFRVMNEMTGKGMKPDAVTLNTVLRIFCVERKHDEAYELLNSARKKGYIVDEVSYG 1131
             L+      +  T +   P++V  +  +   C + K+ +A  ++  + +KG I+ + +Y 
Sbjct: 537  SLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYI 596

Query: 1132 TLIAGYCK 1155
            +L+ G  K
Sbjct: 597  SLMEGLIK 604