BLASTX nr result
ID: Lithospermum22_contig00016477
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00016477 (226 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002534411.1| WD-repeat protein, putative [Ricinus communi... 109 3e-22 ref|XP_002308129.1| predicted protein [Populus trichocarpa] gi|2... 106 2e-21 ref|XP_002269448.1| PREDICTED: uncharacterized WD repeat-contain... 103 2e-20 ref|XP_002874820.1| transducin family protein [Arabidopsis lyrat... 102 3e-20 gb|AAD17343.1| similar to beta-transducins (Pfam: PF00400, Score... 102 3e-20 >ref|XP_002534411.1| WD-repeat protein, putative [Ricinus communis] gi|223525346|gb|EEF27972.1| WD-repeat protein, putative [Ricinus communis] Length = 906 Score = 109 bits (272), Expect = 3e-22 Identities = 45/69 (65%), Positives = 58/69 (84%) Frame = -3 Query: 209 ACGYTNDIMASACGSTNAIMVSAGYHGDIKVWDFNTCKLKSRWEVGCSLIKTIYHRINGL 30 +C + +++ AC STN +M+SAGYHGD+KVWDF +LKSRWEVGCSL++ +YHR+NGL Sbjct: 470 SCAHEGEVVGVACDSTNTLMISAGYHGDVKVWDFKGLELKSRWEVGCSLVQIVYHRLNGL 529 Query: 29 LATVADDLV 3 LATVADDLV Sbjct: 530 LATVADDLV 538 >ref|XP_002308129.1| predicted protein [Populus trichocarpa] gi|222854105|gb|EEE91652.1| predicted protein [Populus trichocarpa] Length = 910 Score = 106 bits (264), Expect = 2e-21 Identities = 45/69 (65%), Positives = 56/69 (81%) Frame = -3 Query: 209 ACGYTNDIMASACGSTNAIMVSAGYHGDIKVWDFNTCKLKSRWEVGCSLIKTIYHRINGL 30 +C + ++++ AC STN M+SAGYHGD+KVWDF LKSRWEVGCSL+K +YHR+NGL Sbjct: 470 SCAHESEVVGVACDSTNTQMISAGYHGDVKVWDFKGRALKSRWEVGCSLVKIVYHRLNGL 529 Query: 29 LATVADDLV 3 LATVADD V Sbjct: 530 LATVADDFV 538 >ref|XP_002269448.1| PREDICTED: uncharacterized WD repeat-containing protein C1672.07 isoform 1 [Vitis vinifera] gi|297740341|emb|CBI30523.3| unnamed protein product [Vitis vinifera] Length = 905 Score = 103 bits (256), Expect = 2e-20 Identities = 42/69 (60%), Positives = 55/69 (79%) Frame = -3 Query: 209 ACGYTNDIMASACGSTNAIMVSAGYHGDIKVWDFNTCKLKSRWEVGCSLIKTIYHRINGL 30 +C + +++ AC STN +M+SAGYHGDIKVWDF +LKSRWE+GC+++K +YHR NGL Sbjct: 470 SCAHDGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRELKSRWEIGCAVVKIVYHRSNGL 529 Query: 29 LATVADDLV 3 LAT DDLV Sbjct: 530 LATATDDLV 538 >ref|XP_002874820.1| transducin family protein [Arabidopsis lyrata subsp. lyrata] gi|297320657|gb|EFH51079.1| transducin family protein [Arabidopsis lyrata subsp. lyrata] Length = 911 Score = 102 bits (255), Expect = 3e-20 Identities = 42/66 (63%), Positives = 55/66 (83%) Frame = -3 Query: 200 YTNDIMASACGSTNAIMVSAGYHGDIKVWDFNTCKLKSRWEVGCSLIKTIYHRINGLLAT 21 + +++ AC STN +M+SAGYHGDIKVWDF +LKS+W++GCSL+K +YHR+NGLLAT Sbjct: 473 HDGEVIGVACDSTNTLMISAGYHGDIKVWDFKKRELKSQWDIGCSLVKIVYHRVNGLLAT 532 Query: 20 VADDLV 3 VADD V Sbjct: 533 VADDFV 538 >gb|AAD17343.1| similar to beta-transducins (Pfam: PF00400, Score=71.7, E=1.5e-17, N=6) [Arabidopsis thaliana] gi|7267253|emb|CAB81036.1| putative WD-repeat membrane protein [Arabidopsis thaliana] Length = 931 Score = 102 bits (254), Expect = 3e-20 Identities = 42/66 (63%), Positives = 55/66 (83%) Frame = -3 Query: 200 YTNDIMASACGSTNAIMVSAGYHGDIKVWDFNTCKLKSRWEVGCSLIKTIYHRINGLLAT 21 + +++ AC STN +M+SAGYHGD+KVWDF +LKS+W+VGCSL+K +YHR+NGLLAT Sbjct: 494 HDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRELKSQWDVGCSLVKIVYHRVNGLLAT 553 Query: 20 VADDLV 3 VADD V Sbjct: 554 VADDFV 559