BLASTX nr result

ID: Lithospermum22_contig00016397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016397
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    64   6e-18
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   2e-16
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    64   3e-16
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    64   6e-16
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    62   1e-15

>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 63.5 bits (153), Expect(2) = 6e-18
 Identities = 27/54 (50%), Positives = 42/54 (77%)
 Frame = +3

Query: 198  GRTKKEVFRFLVAKVEERIRGWKSKLLSQAGREIMIKSVTAAIPNFVMNYFKLP 359
            G+ KK++F+ L  +V  R+ GW+ KLLS+AG+E++IK+V  AIPN+ M+ F+LP
Sbjct: 1046 GKDKKKLFQSLPDRVWNRVHGWEGKLLSKAGKEVLIKTVAQAIPNYTMSVFQLP 1099



 Score = 52.0 bits (123), Expect(2) = 6e-18
 Identities = 24/60 (40%), Positives = 36/60 (60%)
 Frame = +1

Query: 1    FCRASEKEGQELMNILQVYETASGRQINVGKSSVCYEPQVQARVRQRVTTILDMGEVQDH 180
            FC A+  +   L NI   YE ASG++IN  KS++C+ P+  A +++  + ILDM  V  H
Sbjct: 976  FCDATVTDCMALKNIFSTYEAASGQKINKDKSAICFSPKSPAAIKEACSAILDMPVVPCH 1035


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 66.6 bits (161), Expect(2) = 2e-16
 Identities = 27/57 (47%), Positives = 46/57 (80%)
 Frame = +3

Query: 198 GRTKKEVFRFLVAKVEERIRGWKSKLLSQAGREIMIKSVTAAIPNFVMNYFKLPIRI 368
           GR+KK +FR L+ ++ +++RGWK KLLS+AG+E++IK+V  A+P ++M  +KLP+ +
Sbjct: 765 GRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGVYKLPVAV 821



 Score = 43.9 bits (102), Expect(2) = 2e-16
 Identities = 22/60 (36%), Positives = 35/60 (58%)
 Frame = +1

Query: 1   FCRASEKEGQELMNILQVYETASGRQINVGKSSVCYEPQVQARVRQRVTTILDMGEVQDH 180
           F RA+ +E   +++IL  YE ASG++IN  KS V +   V    ++ + T+L M +V  H
Sbjct: 695 FTRATRQECLTIVDILNKYEAASGQKINYEKSEVSFSRGVSCEKKEELITLLHMRQVDRH 754


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 63.5 bits (153), Expect(2) = 3e-16
 Identities = 27/55 (49%), Positives = 43/55 (78%)
 Frame = +3

Query: 192  WLGRTKKEVFRFLVAKVEERIRGWKSKLLSQAGREIMIKSVTAAIPNFVMNYFKL 356
            ++GR++ ++F +L  ++ +RI+GWK KLLS+AG+EI+IK+V  AIP F M  F+L
Sbjct: 1012 FVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFEL 1066



 Score = 46.2 bits (108), Expect(2) = 3e-16
 Identities = 22/53 (41%), Positives = 32/53 (60%)
 Frame = +1

Query: 4    CRASEKEGQELMNILQVYETASGRQINVGKSSVCYEPQVQARVRQRVTTILDM 162
            CRA+  E Q+L  ILQ+YE  SG+ IN  KS+V + P   +  ++ V   L+M
Sbjct: 945  CRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNM 997


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 63.5 bits (153), Expect(2) = 6e-16
 Identities = 27/55 (49%), Positives = 43/55 (78%)
 Frame = +3

Query: 192  WLGRTKKEVFRFLVAKVEERIRGWKSKLLSQAGREIMIKSVTAAIPNFVMNYFKL 356
            ++GR++ ++F +L  ++ +RI+GWK KLLS+AG+EI+IK+V  AIP F M  F+L
Sbjct: 985  FVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFEL 1039



 Score = 45.1 bits (105), Expect(2) = 6e-16
 Identities = 22/53 (41%), Positives = 31/53 (58%)
 Frame = +1

Query: 4    CRASEKEGQELMNILQVYETASGRQINVGKSSVCYEPQVQARVRQRVTTILDM 162
            CRA+  E Q+L  ILQ+YE  SG+ IN  KS+V + P   +  +  V   L+M
Sbjct: 918  CRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNM 970


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 61.6 bits (148), Expect(2) = 1e-15
 Identities = 26/57 (45%), Positives = 43/57 (75%)
 Frame = +3

Query: 198 GRTKKEVFRFLVAKVEERIRGWKSKLLSQAGREIMIKSVTAAIPNFVMNYFKLPIRI 368
           GR++  +F  L+ ++ ++++GWK KLLS+AG+EI++KSV  AIP ++M  +KLP  I
Sbjct: 762 GRSRTAIFDSLMDRIWKKLQGWKEKLLSRAGKEILLKSVIQAIPTYLMGVYKLPCSI 818



 Score = 45.8 bits (107), Expect(2) = 1e-15
 Identities = 23/60 (38%), Positives = 36/60 (60%)
 Frame = +1

Query: 1   FCRASEKEGQELMNILQVYETASGRQINVGKSSVCYEPQVQARVRQRVTTILDMGEVQDH 180
           F RAS +E   ++ IL +YE ASG++IN  KS V +   V    ++ ++ IL M +V+ H
Sbjct: 692 FTRASRQECAIIVEILNLYEQASGQKINYDKSEVSFSKGVSIAQKEELSNILQMKQVERH 751


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