BLASTX nr result

ID: Lithospermum22_contig00016345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016345
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_563654.1| Pectin lyase-like protein [Arabidopsis thaliana...   313   1e-83
ref|XP_002892109.1| glycoside hydrolase family 28 protein [Arabi...   313   1e-83
ref|XP_002515219.1| Polygalacturonase precursor, putative [Ricin...   311   6e-83
ref|XP_003591344.1| Polygalacturonase [Medicago truncatula] gi|3...   310   1e-82
ref|XP_002320271.1| predicted protein [Populus trichocarpa] gi|2...   309   2e-82

>ref|NP_563654.1| Pectin lyase-like protein [Arabidopsis thaliana]
           gi|9972390|gb|AAG10640.1|AC022521_18 Putative
           polygalacturonase [Arabidopsis thaliana]
           gi|66792702|gb|AAY56453.1| At1g02460 [Arabidopsis
           thaliana] gi|332189311|gb|AEE27432.1| Pectin lyase-like
           protein [Arabidopsis thaliana]
          Length = 491

 Score =  313 bits (802), Expect = 1e-83
 Identities = 148/184 (80%), Positives = 168/184 (91%), Gaps = 1/184 (0%)
 Frame = -1

Query: 549 LRIKDSPQFHFRFDNCKKVHIESLHITAPPLSPNTDGIHIENTDSVEIYNSVISNGDDCI 370
           L+IK+SPQFHFRFD C+ VH+ESLHITAPPLSPNTDGIHIEN++SV IYNS+ISNGDDC+
Sbjct: 239 LQIKNSPQFHFRFDGCQGVHVESLHITAPPLSPNTDGIHIENSNSVTIYNSIISNGDDCV 298

Query: 369 SIGSGSYDVNIRNVTCGPG-HGISIGSLGMRNSRACVSNITVRDSTIKFTDNGVRIKTWQ 193
           SIGSGSYDV+IRN+TCGPG HGISIGSLG  NSRACVSNITVRDS IK++DNGVRIKTWQ
Sbjct: 299 SIGSGSYDVDIRNLTCGPGGHGISIGSLGNHNSRACVSNITVRDSVIKYSDNGVRIKTWQ 358

Query: 192 GGSGAVTDVTFDNIRMDTVRNPIIIDQFYCDGRRCTNHTSAVFVSNIQYTGIKGTYDIRS 13
           GGSG+V+ VTF+NI +D+VRNPIIIDQ+YC  + C N TSAVFVS+I Y GIKGTYDIRS
Sbjct: 359 GGSGSVSGVTFNNIHVDSVRNPIIIDQYYCMTKDCANKTSAVFVSDIAYQGIKGTYDIRS 418

Query: 12  PPMH 1
           PPMH
Sbjct: 419 PPMH 422


>ref|XP_002892109.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297337951|gb|EFH68368.1| glycoside hydrolase
           family 28 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 491

 Score =  313 bits (802), Expect = 1e-83
 Identities = 148/184 (80%), Positives = 168/184 (91%), Gaps = 1/184 (0%)
 Frame = -1

Query: 549 LRIKDSPQFHFRFDNCKKVHIESLHITAPPLSPNTDGIHIENTDSVEIYNSVISNGDDCI 370
           L+IK+SPQFHFRFD C+ VH+ESLHITAPPLSPNTDGIHIEN++SV IYNS+ISNGDDC+
Sbjct: 239 LQIKNSPQFHFRFDGCQGVHVESLHITAPPLSPNTDGIHIENSNSVTIYNSIISNGDDCV 298

Query: 369 SIGSGSYDVNIRNVTCGPG-HGISIGSLGMRNSRACVSNITVRDSTIKFTDNGVRIKTWQ 193
           SIGSGSYDV+IRN+TCGPG HGISIGSLG  NSRACVSNITVRDS IK++DNGVRIKTWQ
Sbjct: 299 SIGSGSYDVDIRNLTCGPGGHGISIGSLGNHNSRACVSNITVRDSVIKYSDNGVRIKTWQ 358

Query: 192 GGSGAVTDVTFDNIRMDTVRNPIIIDQFYCDGRRCTNHTSAVFVSNIQYTGIKGTYDIRS 13
           GGSG+V+ VTF+NI +D+VRNPIIIDQ+YC  + C N TSAVFVS+I Y GIKGTYDIRS
Sbjct: 359 GGSGSVSGVTFNNIHVDSVRNPIIIDQYYCMTKDCANKTSAVFVSDIAYQGIKGTYDIRS 418

Query: 12  PPMH 1
           PPMH
Sbjct: 419 PPMH 422


>ref|XP_002515219.1| Polygalacturonase precursor, putative [Ricinus communis]
           gi|223545699|gb|EEF47203.1| Polygalacturonase precursor,
           putative [Ricinus communis]
          Length = 537

 Score =  311 bits (796), Expect = 6e-83
 Identities = 145/183 (79%), Positives = 164/183 (89%)
 Frame = -1

Query: 549 LRIKDSPQFHFRFDNCKKVHIESLHITAPPLSPNTDGIHIENTDSVEIYNSVISNGDDCI 370
           +RIK+SPQF+FRFDNC+ VHI+S+HITAP LSPNTDGIHIENT++VEIY+SVISNGDDC+
Sbjct: 289 IRIKNSPQFNFRFDNCRNVHIDSIHITAPALSPNTDGIHIENTNNVEIYDSVISNGDDCV 348

Query: 369 SIGSGSYDVNIRNVTCGPGHGISIGSLGMRNSRACVSNITVRDSTIKFTDNGVRIKTWQG 190
           SIGSG YDV+IRN+TCGP HGISIGSLG  NSRACVSNITVRDS IK +DNGVRIKTWQG
Sbjct: 349 SIGSGCYDVDIRNITCGPSHGISIGSLGNHNSRACVSNITVRDSVIKLSDNGVRIKTWQG 408

Query: 189 GSGAVTDVTFDNIRMDTVRNPIIIDQFYCDGRRCTNHTSAVFVSNIQYTGIKGTYDIRSP 10
           GSGAVT +TF NI MD V+NPIIIDQFYC  + C+N TSAVFVS+I Y  IKGTY+IRSP
Sbjct: 409 GSGAVTGITFSNIHMDNVKNPIIIDQFYCLTKECSNQTSAVFVSDILYENIKGTYNIRSP 468

Query: 9   PMH 1
           PMH
Sbjct: 469 PMH 471


>ref|XP_003591344.1| Polygalacturonase [Medicago truncatula] gi|355480392|gb|AES61595.1|
           Polygalacturonase [Medicago truncatula]
          Length = 478

 Score =  310 bits (793), Expect = 1e-82
 Identities = 144/183 (78%), Positives = 163/183 (89%)
 Frame = -1

Query: 549 LRIKDSPQFHFRFDNCKKVHIESLHITAPPLSPNTDGIHIENTDSVEIYNSVISNGDDCI 370
           LRIK+SPQFHFRFD C+ VH+ES+ ITAP LSPNTDGIHIENT+ V+IYNSV+SNGDDC+
Sbjct: 230 LRIKNSPQFHFRFDGCQSVHVESIFITAPALSPNTDGIHIENTNDVKIYNSVVSNGDDCV 289

Query: 369 SIGSGSYDVNIRNVTCGPGHGISIGSLGMRNSRACVSNITVRDSTIKFTDNGVRIKTWQG 190
           SIGSG YDV+I+N+TCGPGHGISIGSLG  NSRACVSNITVRDS I+ +DNGVRIKTWQG
Sbjct: 290 SIGSGCYDVDIKNITCGPGHGISIGSLGNHNSRACVSNITVRDSVIRVSDNGVRIKTWQG 349

Query: 189 GSGAVTDVTFDNIRMDTVRNPIIIDQFYCDGRRCTNHTSAVFVSNIQYTGIKGTYDIRSP 10
           GSG+V+ VTF NI MDTV+NPIIIDQFYC  + C+N TSAVFVS+I YT IKGTYDIR P
Sbjct: 350 GSGSVSGVTFSNIHMDTVKNPIIIDQFYCLSKDCSNKTSAVFVSDIVYTSIKGTYDIRHP 409

Query: 9   PMH 1
           PMH
Sbjct: 410 PMH 412


>ref|XP_002320271.1| predicted protein [Populus trichocarpa] gi|222861044|gb|EEE98586.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score =  309 bits (792), Expect = 2e-82
 Identities = 145/183 (79%), Positives = 162/183 (88%)
 Frame = -1

Query: 549 LRIKDSPQFHFRFDNCKKVHIESLHITAPPLSPNTDGIHIENTDSVEIYNSVISNGDDCI 370
           L+IK+SPQF+FRFDNCK VH+ES+HITAP LSPNTDGIHIENT+ VEIYNSVISNGDDC+
Sbjct: 190 LKIKNSPQFNFRFDNCKNVHVESIHITAPALSPNTDGIHIENTNGVEIYNSVISNGDDCV 249

Query: 369 SIGSGSYDVNIRNVTCGPGHGISIGSLGMRNSRACVSNITVRDSTIKFTDNGVRIKTWQG 190
           SIGSG YDV+IRN+TCGP HGISIGSLG  NSRACVSNITVRDS I+ +DNGVRIKTWQG
Sbjct: 250 SIGSGCYDVDIRNITCGPSHGISIGSLGNHNSRACVSNITVRDSVIRVSDNGVRIKTWQG 309

Query: 189 GSGAVTDVTFDNIRMDTVRNPIIIDQFYCDGRRCTNHTSAVFVSNIQYTGIKGTYDIRSP 10
           GSGAV+ +TF NI MD VRNPIIIDQFYC  + CTN TSA+ VS+I Y  IKGTY+IRSP
Sbjct: 310 GSGAVSGITFSNIHMDNVRNPIIIDQFYCLSKGCTNQTSALSVSDILYENIKGTYNIRSP 369

Query: 9   PMH 1
           PMH
Sbjct: 370 PMH 372


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