BLASTX nr result

ID: Lithospermum22_contig00016343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016343
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309588.1| predicted protein [Populus trichocarpa] gi|2...   207   2e-51
ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g1...   194   3e-47
ref|XP_002516614.1| ring finger protein, putative [Ricinus commu...   193   6e-47
ref|XP_002324833.1| predicted protein [Populus trichocarpa] gi|2...   193   6e-47
ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   191   3e-46

>ref|XP_002309588.1| predicted protein [Populus trichocarpa] gi|222855564|gb|EEE93111.1|
           predicted protein [Populus trichocarpa]
          Length = 406

 Score =  207 bits (528), Expect = 2e-51
 Identities = 116/234 (49%), Positives = 154/234 (65%), Gaps = 4/234 (1%)
 Frame = +2

Query: 257 HRKNQTSKISFSMEQTDRRDEIEHVIDITSTGAVSSSISHDR--SLIVPQQHQPYGDEPS 430
           H ++QT      ME+ +  +   H+IDI     V  S SHDR  S +    H+   D PS
Sbjct: 9   HSESQTDTFPLLMERPENLNSSAHIIDIPRNIEVPGSPSHDRISSGLEASSHE---DRPS 65

Query: 431 TSARVSEYRPTLSTASGRSNSRSASLVXXXXXXXXXXXPLNSGIWISVELVLTVSQIVAA 610
           +  R    +P+ S ++G +NSRS+SL+           PLNSG+WISVELVLT+SQIVA+
Sbjct: 66  SGVRAPSTQPSTSLSNG-TNSRSSSLIRRGEARRRRS-PLNSGLWISVELVLTLSQIVAS 123

Query: 611 IVVLSLSRNEHPHAPLSAWVVGYASGCVAVLPLLYWRYHHRNQGSDRGPSQSHQGSSNGN 790
           IVVLS+SR+EHPHAPL AW+VGYASGCVA LPLLYWRY +RNQ  ++  +Q+HQGS++ N
Sbjct: 124 IVVLSVSRHEHPHAPLFAWIVGYASGCVATLPLLYWRYRYRNQSLEQDSAQNHQGSAHIN 183

Query: 791 LTGGQY--STNRVSEAVDDHATDVTPPAGTTFGISTARLKRLIDYFKMALDCFF 946
           +  G +  S +R SE+ DD  +  T P G+   +  ARLK L++YFKMALDCFF
Sbjct: 184 VPAGPFSLSVSRNSES-DDRRSATTSPRGSQNAVLNARLKVLVEYFKMALDCFF 236


>ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
           vinifera]
          Length = 421

 Score =  194 bits (493), Expect = 3e-47
 Identities = 111/241 (46%), Positives = 148/241 (61%), Gaps = 3/241 (1%)
 Frame = +2

Query: 233 MAGSLLGYHRKNQTSKISFSMEQTDRRDEIEHVIDITSTGAVSSSISHDRSLIVPQQHQP 412
           MA   L  H K+Q+      MEQ   + + EH+IDIT +G  SSS S +           
Sbjct: 1   MAIPSLELHSKSQSDIYPLLMEQPGNQIDTEHIIDITRSGDASSSNSSNDGPSTSLDQLQ 60

Query: 413 YGDEPSTSARVSEYRPTLSTASGRSNSRSASLVXXXXXXXXXXXPLNSGIWISVELVLTV 592
           + D P++SARV   +P+ S+ S  SNSR++              PLNSG+WIS+EL LTV
Sbjct: 61  HDDRPASSARVPISQPSFSS-SNVSNSRNS--FRRRADARRRRSPLNSGLWISIELALTV 117

Query: 593 SQIVAAIVVLSLSRNEHPHAPLSAWVVGYASGCVAVLPLLYWRYHHRNQGSDRGPSQSHQ 772
           SQI+A++VVLSLSR+EHPHAPL  W+VGYASGCVA LP+LYWR+ HRNQG ++  +QS Q
Sbjct: 118 SQIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQGHEQESAQSRQ 177

Query: 773 GSSNGNLTGGQYSTNRVSEAVDDHATDVTPPA---GTTFGISTARLKRLIDYFKMALDCF 943
            S + NL GG   +  V+   ++     + PA     +    +ARLK L++YFKMALDCF
Sbjct: 178 VSFHSNLPGGPTFSLSVTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLVEYFKMALDCF 237

Query: 944 F 946
           F
Sbjct: 238 F 238


>ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
           gi|223544434|gb|EEF45955.1| ring finger protein,
           putative [Ricinus communis]
          Length = 437

 Score =  193 bits (490), Expect = 6e-47
 Identities = 111/232 (47%), Positives = 144/232 (62%), Gaps = 2/232 (0%)
 Frame = +2

Query: 257 HRKNQTSKISFSMEQTDRRDEIEHVIDITSTGAVSSSISHDRSLIVPQQHQPYGDEPSTS 436
           H ++ T      MEQ++  +  EH+IDI  +   S S SHDR+     +     D P+TS
Sbjct: 9   HSESLTDTCPLLMEQSNSINSSEHIIDIPRSSDSSPSTSHDRTTS-GLEASSNEDRPTTS 67

Query: 437 ARVSEYRPTLSTASGRSNSRSASLVXXXXXXXXXXXPLNSGIWISVELVLTVSQIVAAIV 616
            R        +  S  SN+R++SL+           PLNSG+WISVELVLTVSQI+A+IV
Sbjct: 68  VRTPSISHLSTGTSNGSNTRNSSLIRRGEARRRRS-PLNSGLWISVELVLTVSQIIASIV 126

Query: 617 VLSLSRNEHPHAPLSAWVVGYASGCVAVLPLLYWRYHHRNQGSDRGPSQSHQGSSNGNLT 796
           VLSLSR+EHP APL AW+VGYASGCVA LPLLYWRY HRNQ +++  +Q  Q SS+ ++ 
Sbjct: 127 VLSLSRHEHPRAPLFAWIVGYASGCVATLPLLYWRYRHRNQVTEQEAAQPRQ-SSHFSVP 185

Query: 797 GGQYSTN--RVSEAVDDHATDVTPPAGTTFGISTARLKRLIDYFKMALDCFF 946
           G   S +  R SE VD  ++  +   G   G   ARLK L++YFKMALDCFF
Sbjct: 186 GDSISISITRNSEVVDRRSSSTSSRGGQNSGALNARLKTLVEYFKMALDCFF 237


>ref|XP_002324833.1| predicted protein [Populus trichocarpa] gi|222866267|gb|EEF03398.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  193 bits (490), Expect = 6e-47
 Identities = 111/234 (47%), Positives = 148/234 (63%), Gaps = 4/234 (1%)
 Frame = +2

Query: 257 HRKNQTSKISFSMEQTDRRDEIEHVIDITSTGAVSSSISHDRSLIVPQQHQPYGDEPSTS 436
           H +NQT      ME+ +  +  EH+IDI +  +VS S +   + +    H+   D P + 
Sbjct: 9   HSENQTDTFPLLMERQENPNSSEHIIDIRNEVSVSPSHNRISTGLEASLHE---DRPLSG 65

Query: 437 ARVSEYRPTLSTASGRSNSRSASLVXXXXXXXXXXXPLNSGIWISVELVLTVSQIVAAIV 616
            R     P  S ++G +NSRS+SL+           PLNSG+WISVELVLT+SQI+A+IV
Sbjct: 66  VRAPTSPPPTSLSNG-TNSRSSSLIRRGEARRRRS-PLNSGLWISVELVLTLSQIIASIV 123

Query: 617 VLSLSRNEHPHAPLSAWVVGYASGCVAVLPLLYWRYHHRNQGSDRGPSQSHQGSSNGNLT 796
           VLS+SR EHP APL AW+VGYASGCVA LPLLYWRY HRNQ  ++  +Q+HQGS++ N+ 
Sbjct: 124 VLSVSRKEHPRAPLFAWIVGYASGCVATLPLLYWRYSHRNQALEQDSAQNHQGSAHINVP 183

Query: 797 GGQY--STNRVSEAVDDHATDVTPPAGTTFGISTAR--LKRLIDYFKMALDCFF 946
            G +  S +R SE  +D  +  T P G    +  AR  LK L++YFKMALDCFF
Sbjct: 184 AGPFSLSVSRNSEG-EDRRSATTSPRGGQNAVLNARYELKVLLEYFKMALDCFF 236


>ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
          Length = 419

 Score =  191 bits (484), Expect = 3e-46
 Identities = 114/241 (47%), Positives = 149/241 (61%), Gaps = 8/241 (3%)
 Frame = +2

Query: 248 LGYHRKNQTSKISFSMEQTDRRDEIEHVIDITSTG-AVSSSISHDRSL---IVPQQHQPY 415
           LG +   QT +    MEQ + R+  +HVIDIT  G A+++S  +D+     +   Q QP 
Sbjct: 6   LGSNSNTQTDQHPLLMEQPETRNGHQHVIDITRNGEALTTSYRNDQHSEMHLTQNQDQPA 65

Query: 416 GDEPSTSARVSEYRPTLSTASGRSNSR-SASLVXXXXXXXXXXXPLNSGIWISVELVLTV 592
           GD   +S +      T S+++ R NSR SASL            PLNSG+WISVELV+TV
Sbjct: 66  GDAQDSSHQ------TTSSSAPRLNSRNSASLRRGDGYGHRGRSPLNSGLWISVELVVTV 119

Query: 593 SQIVAAIVVLSLSRNEHPHAPLSAWVVGYASGCVAVLPLLYWRYHHRNQGSDRGPSQSHQ 772
           SQI+A+IVVLSLSRNE+P APL AW+VGY SGCVA LP+LYWR+ +RNQ +++  SQ+ Q
Sbjct: 120 SQIIASIVVLSLSRNENPQAPLFAWIVGYGSGCVATLPILYWRFRNRNQSNEQDTSQASQ 179

Query: 773 GSSNGNLTGGQYSTNRVSEAVDD---HATDVTPPAGTTFGISTARLKRLIDYFKMALDCF 943
           GSS  N     Y++  VS   D+   HAT          G  T+RL  L+D+FKMALDCF
Sbjct: 180 GSSGSNPPDRSYTSIYVSHVSDEENGHATQSASRNTIMPGAFTSRLNGLVDHFKMALDCF 239

Query: 944 F 946
           F
Sbjct: 240 F 240


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