BLASTX nr result

ID: Lithospermum22_contig00016291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016291
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270960.2| PREDICTED: nucleoporin SEH1-like [Vitis vini...   156   2e-36
emb|CAN61200.1| hypothetical protein VITISV_003214 [Vitis vinifera]   156   2e-36
ref|XP_003538190.1| PREDICTED: nucleoporin SEH1-like [Glycine max]    148   5e-34
ref|XP_003517499.1| PREDICTED: nucleoporin SEH1-like [Glycine max]    148   5e-34
gb|AAG59882.1|AF325901_1 seh1-like protein [Arabidopsis thaliana]     145   3e-33

>ref|XP_002270960.2| PREDICTED: nucleoporin SEH1-like [Vitis vinifera]
           gi|297742315|emb|CBI34464.3| unnamed protein product
           [Vitis vinifera]
          Length = 325

 Score =  156 bits (394), Expect = 2e-36
 Identities = 72/92 (78%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   WAPNIGRPYELISVATSDGISIWHVGSNPEIDGRLWVEKVALLSGHCGEVWQMEWDMSGM 181
           WAPNIGRPYE+++VAT  GI+IWH+G NP+IDGRL VE+VALLSGH GEVWQMEWDMSGM
Sbjct: 234 WAPNIGRPYEVMAVATHKGIAIWHLGLNPDIDGRLSVERVALLSGHDGEVWQMEWDMSGM 293

Query: 182 TLASSADDG-VRLWQSNLKGVWHEQATLEPTT 274
           TLA++  DG VRLWQSNL GVWHEQA LEPT+
Sbjct: 294 TLATTGGDGMVRLWQSNLNGVWHEQAALEPTS 325


>emb|CAN61200.1| hypothetical protein VITISV_003214 [Vitis vinifera]
          Length = 325

 Score =  156 bits (394), Expect = 2e-36
 Identities = 72/92 (78%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   WAPNIGRPYELISVATSDGISIWHVGSNPEIDGRLWVEKVALLSGHCGEVWQMEWDMSGM 181
           WAPNIGRPYE+++VAT  GI+IWH+G NP+IDGRL VE+VALLSGH GEVWQMEWDMSGM
Sbjct: 234 WAPNIGRPYEVMAVATHKGIAIWHLGLNPDIDGRLSVERVALLSGHDGEVWQMEWDMSGM 293

Query: 182 TLASSADDG-VRLWQSNLKGVWHEQATLEPTT 274
           TLA++  DG VRLWQSNL GVWHEQA LEPT+
Sbjct: 294 TLATTGGDGMVRLWQSNLNGVWHEQAALEPTS 325


>ref|XP_003538190.1| PREDICTED: nucleoporin SEH1-like [Glycine max]
          Length = 326

 Score =  148 bits (373), Expect = 5e-34
 Identities = 68/92 (73%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   WAPNIGRPYELISVATSDGISIWHVGSNPEIDGRLWVEKVALLSGHCGEVWQMEWDMSGM 181
           WAPNIGRPYE+I+VAT  G++IWH+G NP+ DGRL VE+VALLSGH G VWQMEWDMSGM
Sbjct: 235 WAPNIGRPYEIIAVATHKGLAIWHLGLNPDHDGRLPVERVALLSGHEGMVWQMEWDMSGM 294

Query: 182 TLASSADDG-VRLWQSNLKGVWHEQATLEPTT 274
           TLA++  DG VRLWQSNL GVWH+QA  EPT+
Sbjct: 295 TLATTGHDGMVRLWQSNLNGVWHQQAAFEPTS 326


>ref|XP_003517499.1| PREDICTED: nucleoporin SEH1-like [Glycine max]
          Length = 326

 Score =  148 bits (373), Expect = 5e-34
 Identities = 68/92 (73%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   WAPNIGRPYELISVATSDGISIWHVGSNPEIDGRLWVEKVALLSGHCGEVWQMEWDMSGM 181
           WAPNIGRPYE+I+VAT  G++IWH+G NP+ DGRL VE+VALLSGH G VWQMEWDMSGM
Sbjct: 235 WAPNIGRPYEIIAVATHKGLAIWHLGLNPDHDGRLPVERVALLSGHEGMVWQMEWDMSGM 294

Query: 182 TLASSADDG-VRLWQSNLKGVWHEQATLEPTT 274
           TLA++  DG VRLWQSNL GVWH+QA  EPT+
Sbjct: 295 TLATTGHDGMVRLWQSNLNGVWHQQAAFEPTS 326


>gb|AAG59882.1|AF325901_1 seh1-like protein [Arabidopsis thaliana]
          Length = 326

 Score =  145 bits (367), Expect = 3e-33
 Identities = 67/90 (74%), Positives = 77/90 (85%), Gaps = 1/90 (1%)
 Frame = +2

Query: 2   WAPNIGRPYELISVATSDGISIWHVGSNPEIDGRLWVEKVALLSGHCGEVWQMEWDMSGM 181
           WAPNIGRPYE+++VAT  GI IWHVG  P+++GRL V+KV+ LSGH GEVWQMEWDMSGM
Sbjct: 234 WAPNIGRPYEVVAVATHKGIGIWHVGLAPDLEGRLPVKKVSSLSGHQGEVWQMEWDMSGM 293

Query: 182 TLASSADDG-VRLWQSNLKGVWHEQATLEP 268
           TLAS+  DG V+LWQSNL G WHEQATLEP
Sbjct: 294 TLASTGSDGMVKLWQSNLNGEWHEQATLEP 323


Top