BLASTX nr result

ID: Lithospermum22_contig00016274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016274
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containin...   234   8e-60
emb|CBI35338.3| unnamed protein product [Vitis vinifera]              234   8e-60
ref|XP_003554837.1| PREDICTED: katanin p80 WD40 repeat-containin...   219   3e-55
ref|XP_003525689.1| PREDICTED: katanin p80 WD40 repeat-containin...   218   7e-55
ref|XP_004147132.1| PREDICTED: katanin p80 WD40 repeat-containin...   217   1e-54

>ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Vitis vinifera]
          Length = 800

 Score =  234 bits (598), Expect = 8e-60
 Identities = 129/218 (59%), Positives = 158/218 (72%), Gaps = 6/218 (2%)
 Frame = -3

Query: 636 CGLHESLKVVSWEPIRCHDSFDVGWSTLSDLNIHEGKLLGCSYNQSCVGVWVVDISRIEP 457
           CGLHESLKV SWEPIRCHD+ DVGWS LSDLNIHEGKLLGCSYNQSCVGVWVVD+SRIEP
Sbjct: 244 CGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNIHEGKLLGCSYNQSCVGVWVVDLSRIEP 303

Query: 456 YSLGSSARLDGHSDLKTNASSE-AVLIENTTKAAFGRLSISRSPD-ATKETKSTGRLSVS 283
           Y++G+  RL+GHS+ K+++S   +VL ENTTKA+ GRLSIS++ +   KETKS GRLSVS
Sbjct: 304 YAVGNVTRLNGHSESKSSSSGNLSVLTENTTKASLGRLSISQNTELIMKETKSLGRLSVS 363

Query: 282 QNLD--FKETKSLTSSVNAPSTPHRSSIGFGTRVXXXXXXXXXXXXXXXXNMPKASAINA 109
           QN D   KETK L S+ + P TP R ++  G +                 +    S  N 
Sbjct: 364 QNSDPVDKETKCLASTGSVPGTPQRVNLNTGPKTTLASSTTAPKRISAKAH----STANV 419

Query: 108 SVFNRSEVLPVIVPRHDMRSEQ-AESRKE-GIVGRTMP 1
           S FN+S+V+PVIVPR ++R +Q AESRKE G+ GRT+P
Sbjct: 420 SAFNKSDVIPVIVPRTNVRLDQAAESRKEVGVSGRTIP 457


>emb|CBI35338.3| unnamed protein product [Vitis vinifera]
          Length = 989

 Score =  234 bits (598), Expect = 8e-60
 Identities = 129/218 (59%), Positives = 158/218 (72%), Gaps = 6/218 (2%)
 Frame = -3

Query: 636 CGLHESLKVVSWEPIRCHDSFDVGWSTLSDLNIHEGKLLGCSYNQSCVGVWVVDISRIEP 457
           CGLHESLKV SWEPIRCHD+ DVGWS LSDLNIHEGKLLGCSYNQSCVGVWVVD+SRIEP
Sbjct: 244 CGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNIHEGKLLGCSYNQSCVGVWVVDLSRIEP 303

Query: 456 YSLGSSARLDGHSDLKTNASSE-AVLIENTTKAAFGRLSISRSPD-ATKETKSTGRLSVS 283
           Y++G+  RL+GHS+ K+++S   +VL ENTTKA+ GRLSIS++ +   KETKS GRLSVS
Sbjct: 304 YAVGNVTRLNGHSESKSSSSGNLSVLTENTTKASLGRLSISQNTELIMKETKSLGRLSVS 363

Query: 282 QNLD--FKETKSLTSSVNAPSTPHRSSIGFGTRVXXXXXXXXXXXXXXXXNMPKASAINA 109
           QN D   KETK L S+ + P TP R ++  G +                 +    S  N 
Sbjct: 364 QNSDPVDKETKCLASTGSVPGTPQRVNLNTGPKTTLASSTTAPKRISAKAH----STANV 419

Query: 108 SVFNRSEVLPVIVPRHDMRSEQ-AESRKE-GIVGRTMP 1
           S FN+S+V+PVIVPR ++R +Q AESRKE G+ GRT+P
Sbjct: 420 SAFNKSDVIPVIVPRTNVRLDQAAESRKEVGVSGRTIP 457


>ref|XP_003554837.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 758

 Score =  219 bits (559), Expect = 3e-55
 Identities = 123/217 (56%), Positives = 152/217 (70%), Gaps = 5/217 (2%)
 Frame = -3

Query: 636 CGLHESLKVVSWEPIRCHDSFDVGWSTLSDLNIHEGKLLGCSYNQSCVGVWVVDISRIEP 457
           CGLHESLKV SWEPIRCHD  DVGWS LSDLN HEGKLLGCSYNQSCVGVWVVDISRIEP
Sbjct: 244 CGLHESLKVFSWEPIRCHDMVDVGWSRLSDLNFHEGKLLGCSYNQSCVGVWVVDISRIEP 303

Query: 456 YSLGSSARLDGHSDLKTNASSEAVLIENTTKAAFGRLSISRSPD-ATKETKSTGRLSVSQ 280
           Y+L +   L+GHS+ K+++ +  VL E T KA   RLS+S++PD   KET+S GRLSVSQ
Sbjct: 304 YALNNVNHLNGHSETKSSSGNMTVLNEITAKA---RLSVSQNPDQLLKETRSLGRLSVSQ 360

Query: 279 NLD-FKETKSLTSSVNAPSTPHRSSIGFGTR-VXXXXXXXXXXXXXXXXNMPKASAINAS 106
           + D  KE K L S+ +APSTP R ++  G + V                ++   +  +A 
Sbjct: 361 DSDPLKEGKCLASTGSAPSTPQRINLNSGPKTVPGGSTTVLNTTAQKKSSLKSHTTSSAP 420

Query: 105 VFNRSEVLPVIVPRHDMRSEQ-AESRKE-GIVGRTMP 1
           + N+S+++PVIVPR  MRSE  A+SRKE G+ GRTMP
Sbjct: 421 LINKSDIIPVIVPRTSMRSEPVADSRKEVGVSGRTMP 457


>ref|XP_003525689.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 533

 Score =  218 bits (555), Expect = 7e-55
 Identities = 121/217 (55%), Positives = 152/217 (70%), Gaps = 5/217 (2%)
 Frame = -3

Query: 636 CGLHESLKVVSWEPIRCHDSFDVGWSTLSDLNIHEGKLLGCSYNQSCVGVWVVDISRIEP 457
           CGLHESLKV SWEPIRCHD  DVGWS LSDLN+HEGKLLGCSYNQSCVGVWVVDISRIEP
Sbjct: 244 CGLHESLKVFSWEPIRCHDMVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEP 303

Query: 456 YSLGSSARLDGHSDLKTNASSEAVLIENTTKAAFGRLSISRSPD-ATKETKSTGRLSVSQ 280
           Y+L +   L+GHS+ K+++ +  VL E T KA   RLS+S++PD   KE +S GRLSVSQ
Sbjct: 304 YALNNVNHLNGHSETKSSSGNMTVLNEITAKA---RLSVSQNPDQLLKEIRSLGRLSVSQ 360

Query: 279 NLD-FKETKSLTSSVNAPSTPHRSSIGFGTR-VXXXXXXXXXXXXXXXXNMPKASAINAS 106
           + D  KE K L S+ +APSTP R ++  G + V                ++   +A +  
Sbjct: 361 DSDSLKEGKCLASTGSAPSTPQRINLNSGPKAVPGGSTTVLNTTAQKRSSLKSHTASSVP 420

Query: 105 VFNRSEVLPVIVPRHDMRSEQ-AESRKE-GIVGRTMP 1
           + N+S+++P+IVPR  MRSE  A+SRKE G+ GRTMP
Sbjct: 421 LINKSDIIPIIVPRTSMRSEPVADSRKEVGVSGRTMP 457


>ref|XP_004147132.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           [Cucumis sativus] gi|449524677|ref|XP_004169348.1|
           PREDICTED: katanin p80 WD40 repeat-containing subunit B1
           homolog [Cucumis sativus]
          Length = 795

 Score =  217 bits (553), Expect = 1e-54
 Identities = 119/216 (55%), Positives = 148/216 (68%), Gaps = 4/216 (1%)
 Frame = -3

Query: 636 CGLHESLKVVSWEPIRCHDSFDVGWSTLSDLNIHEGKLLGCSYNQSCVGVWVVDISRIEP 457
           CGLHESLKV SWEPIRCHD  +VGWS LSDLN+HEGKLLGCSYNQSCVGVWVVDI+R EP
Sbjct: 244 CGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDITRTEP 303

Query: 456 YSLGSSARLDGHSDLKTNASSEAVLIENTTKAAFGRLSISRSPDA-TKETKSTGRLSVSQ 280
           Y++ ++ RL+G  + K   SS  +  EN TK +FG LS+S++ DA  KETK+ GRLSVSQ
Sbjct: 304 YAVNNANRLNGRPEPK---SSSHLQNENNTKTSFGGLSVSQTSDALLKETKTLGRLSVSQ 360

Query: 279 NLDF-KETKSLTSSVNAPSTPHRSSIGFGTRVXXXXXXXXXXXXXXXXNMPKA-SAINAS 106
           N D  K+ KSL+S+ N PSTP + ++  G++                 N  KA S  N  
Sbjct: 361 NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVSSAAVPSAVVPKRNSVKATSTFNNP 420

Query: 105 VFNRSEVLPVIVPRHDMRSEQAESRKE-GIVGRTMP 1
           +FN+S+V+PVIVPR   R EQ +SRKE  + GR  P
Sbjct: 421 IFNKSDVIPVIVPRTSSRHEQDDSRKECDVAGRAAP 456


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