BLASTX nr result

ID: Lithospermum22_contig00016256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016256
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515746.1| DNA polymerase delta catalytic subunit, puta...   154   5e-36
ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic su...   150   1e-34
ref|NP_001190611.1| DNA polymerase delta subunit 1 [Arabidopsis ...   148   5e-34
ref|XP_002307042.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
ref|NP_201201.2| DNA polymerase delta subunit 1 [Arabidopsis tha...   148   5e-34

>ref|XP_002515746.1| DNA polymerase delta catalytic subunit, putative [Ricinus communis]
           gi|223545183|gb|EEF46693.1| DNA polymerase delta
           catalytic subunit, putative [Ricinus communis]
          Length = 1049

 Score =  154 bits (390), Expect = 5e-36
 Identities = 74/92 (80%), Positives = 80/92 (86%)
 Frame = -1

Query: 276 SEQGTYEGATVLEARTGFYDKPIATLDFASLYPSIMMAYNLCYCTLVTPEDARRLNIPPE 97
           SEQG+YEGATVLEA  GFY+KPIATLDFASLYPSIMMAYNLCYCTLVTPED R+LN+PPE
Sbjct: 501 SEQGSYEGATVLEANAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPE 560

Query: 96  CVNKTPSGETFVRPDLQKGXXXXXXXXXLAAR 1
           CVNKTPSGETFV+P+LQKG         LAAR
Sbjct: 561 CVNKTPSGETFVKPNLQKGILPEILEELLAAR 592


>ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
           gi|296088521|emb|CBI37512.3| unnamed protein product
           [Vitis vinifera]
          Length = 1089

 Score =  150 bits (379), Expect = 1e-34
 Identities = 73/92 (79%), Positives = 77/92 (83%)
 Frame = -1

Query: 276 SEQGTYEGATVLEARTGFYDKPIATLDFASLYPSIMMAYNLCYCTLVTPEDARRLNIPPE 97
           SEQGTYEGATVLEA  GFY+KPIATLDFASLYPSIMMAYNLCYCTLVTPED R+LN+PPE
Sbjct: 566 SEQGTYEGATVLEANAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPE 625

Query: 96  CVNKTPSGETFVRPDLQKGXXXXXXXXXLAAR 1
           CVNKTPSGE FV+  LQKG         LAAR
Sbjct: 626 CVNKTPSGEIFVKSSLQKGILPEILEELLAAR 657


>ref|NP_001190611.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
           gi|332010439|gb|AED97822.1| DNA polymerase delta subunit
           1 [Arabidopsis thaliana]
          Length = 1112

 Score =  148 bits (373), Expect = 5e-34
 Identities = 70/79 (88%), Positives = 74/79 (93%)
 Frame = -1

Query: 276 SEQGTYEGATVLEARTGFYDKPIATLDFASLYPSIMMAYNLCYCTLVTPEDARRLNIPPE 97
           SEQGTYEGATVLEARTGFY+KPIATLDFASLYPSIMMAYNLCYCTLVTPED R+LN+PPE
Sbjct: 591 SEQGTYEGATVLEARTGFYEKPIATLDFASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPE 650

Query: 96  CVNKTPSGETFVRPDLQKG 40
            V KTPSGETFV+  LQKG
Sbjct: 651 HVTKTPSGETFVKQTLQKG 669


>ref|XP_002307042.1| predicted protein [Populus trichocarpa] gi|222856491|gb|EEE94038.1|
           predicted protein [Populus trichocarpa]
          Length = 1081

 Score =  148 bits (373), Expect = 5e-34
 Identities = 67/79 (84%), Positives = 74/79 (93%)
 Frame = -1

Query: 276 SEQGTYEGATVLEARTGFYDKPIATLDFASLYPSIMMAYNLCYCTLVTPEDARRLNIPPE 97
           SEQG YEGATVLE + GFY+KPIATLDFASLYPSIMMAYNLCYCTLVTPED R+LN+PPE
Sbjct: 558 SEQGKYEGATVLEPKAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPE 617

Query: 96  CVNKTPSGETFVRPDLQKG 40
           C+NKTPSGETFV+ +LQKG
Sbjct: 618 CINKTPSGETFVKSNLQKG 636


>ref|NP_201201.2| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
           gi|322510022|sp|Q9LVN7.2|DPOD1_ARATH RecName: Full=DNA
           polymerase delta catalytic subunit; AltName:
           Full=Protein EMBRYO DEFECTIVE 2780
           gi|76262800|gb|ABA41487.1| DNA-directed DNA polymerase
           delta catalytic subunit [Arabidopsis thaliana]
           gi|332010438|gb|AED97821.1| DNA polymerase delta subunit
           1 [Arabidopsis thaliana]
          Length = 1095

 Score =  148 bits (373), Expect = 5e-34
 Identities = 70/79 (88%), Positives = 74/79 (93%)
 Frame = -1

Query: 276 SEQGTYEGATVLEARTGFYDKPIATLDFASLYPSIMMAYNLCYCTLVTPEDARRLNIPPE 97
           SEQGTYEGATVLEARTGFY+KPIATLDFASLYPSIMMAYNLCYCTLVTPED R+LN+PPE
Sbjct: 574 SEQGTYEGATVLEARTGFYEKPIATLDFASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPE 633

Query: 96  CVNKTPSGETFVRPDLQKG 40
            V KTPSGETFV+  LQKG
Sbjct: 634 HVTKTPSGETFVKQTLQKG 652


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