BLASTX nr result

ID: Lithospermum22_contig00016211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016211
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAP16663.1| tetratricopeptide repeat protein [Solanum lycope...    45   2e-07
ref|XP_003622987.1| Tetratricopeptide repeat protein [Medicago t...    43   4e-06

>emb|CAP16663.1| tetratricopeptide repeat protein [Solanum lycopersicum]
          Length = 261

 Score = 45.1 bits (105), Expect(2) = 2e-07
 Identities = 25/48 (52%), Positives = 32/48 (66%)
 Frame = +2

Query: 437 RRNIIRLKPMADEKREKMKEEIIGETFKNLINIQINRCLKLCDGFYTL 580
           RR +I LKP+ADEKREKMKEE+IG+  K + N  + R     D F T+
Sbjct: 201 RRTVILLKPLADEKREKMKEEMIGK-LKEMGNSILGRFGMSVDNFKTV 247



 Score = 36.6 bits (83), Expect(2) = 2e-07
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +1

Query: 310 TDMTKILELHPSFDKARRNIIRL 378
           TDMTKILEL PS D+ARR +I L
Sbjct: 185 TDMTKILELEPSHDQARRTVILL 207


>ref|XP_003622987.1| Tetratricopeptide repeat protein [Medicago truncatula]
           gi|355498002|gb|AES79205.1| Tetratricopeptide repeat
           protein [Medicago truncatula]
          Length = 271

 Score = 42.7 bits (99), Expect(2) = 4e-06
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = +1

Query: 697 FWDDLDNFKAVKDPNTGSYSVLMQR 771
           F   LDNFKAVKDPNTGSYS+ M+R
Sbjct: 247 FGMSLDNFKAVKDPNTGSYSISMER 271



 Score = 34.7 bits (78), Expect(2) = 4e-06
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 660 FCTGKLKEMGNSILGRFG 713
           +C  KLKEMGNS+LGRFG
Sbjct: 231 WCVEKLKEMGNSVLGRFG 248


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