BLASTX nr result

ID: Lithospermum22_contig00016136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016136
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat...   147   1e-33
ref|XP_002313059.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002306087.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002306089.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat...   139   3e-31

>ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Vitis vinifera]
          Length = 670

 Score =  147 bits (370), Expect = 1e-33
 Identities = 69/99 (69%), Positives = 83/99 (83%)
 Frame = -2

Query: 297 GVQPDAITFIALLSVCRHRGLVEMGETYFLSMTEEYEIQPETDHFACMIDLYGRANQLDK 118
           GV+PDA+TF+ALLS CRH GLVE+GE YF SMT+ Y I PE DH+ACMIDLYGRANQL+K
Sbjct: 486 GVRPDAVTFVALLSACRHCGLVELGEKYFASMTD-YNILPEIDHYACMIDLYGRANQLEK 544

Query: 117 AIAFMGKLPVEEDAVILGTFLNACKSNKNVELAGAVEEK 1
           A+AFM ++P+E DAVILG FLNAC+ N+N +LA   EEK
Sbjct: 545 AVAFMKRIPIEPDAVILGAFLNACRINRNTKLAREAEEK 583


>ref|XP_002313059.1| predicted protein [Populus trichocarpa] gi|222849467|gb|EEE87014.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/100 (66%), Positives = 80/100 (80%), Gaps = 1/100 (1%)
 Frame = -2

Query: 297 GVQPDAITFIALLSVCRHRGLVEMGETYFLSMTEEYEIQPETDHFACMIDLYGRANQLDK 118
           GV PDAITF+ALLS CRHRGLV++GE  F SMTE+Y I PETDH+ACMIDLYGRA+QL+K
Sbjct: 488 GVGPDAITFVALLSACRHRGLVDLGERTFYSMTEDYLILPETDHYACMIDLYGRASQLEK 547

Query: 117 AIAFMGKLPVE-EDAVILGTFLNACKSNKNVELAGAVEEK 1
            + FM ++P+E +DA + G F NAC+ NKN ELA   EEK
Sbjct: 548 MVLFMQRIPIEYQDAAVAGAFFNACRLNKNTELAREAEEK 587


>ref|XP_002306087.1| predicted protein [Populus trichocarpa] gi|222849051|gb|EEE86598.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/100 (65%), Positives = 80/100 (80%), Gaps = 1/100 (1%)
 Frame = -2

Query: 297 GVQPDAITFIALLSVCRHRGLVEMGETYFLSMTEEYEIQPETDHFACMIDLYGRANQLDK 118
           GV PDA+TF+ALLS CRHRGLV++GE  F SMTE+Y I PETDH+ACMIDLYGRA+QL+K
Sbjct: 488 GVGPDAVTFVALLSACRHRGLVDLGEKTFYSMTEDYHILPETDHYACMIDLYGRASQLEK 547

Query: 117 AIAFMGKLPVE-EDAVILGTFLNACKSNKNVELAGAVEEK 1
            + FM ++PVE +DA ++G F NAC+ N N ELA   EEK
Sbjct: 548 MVLFMQRIPVEHQDAAVVGAFFNACRLNNNTELAKEAEEK 587


>ref|XP_002306089.1| predicted protein [Populus trichocarpa] gi|222849053|gb|EEE86600.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/100 (64%), Positives = 80/100 (80%), Gaps = 1/100 (1%)
 Frame = -2

Query: 297 GVQPDAITFIALLSVCRHRGLVEMGETYFLSMTEEYEIQPETDHFACMIDLYGRANQLDK 118
           GV PDA+TF+ALLS CRHRGLV++GE  F SMTE+Y I PETDH+ACMIDLYGRA+QL+K
Sbjct: 488 GVGPDAVTFVALLSACRHRGLVDLGEKTFYSMTEDYHILPETDHYACMIDLYGRASQLEK 547

Query: 117 AIAFMGKLPVE-EDAVILGTFLNACKSNKNVELAGAVEEK 1
            + FM ++P+E +DA ++G F NAC+ N N ELA   EEK
Sbjct: 548 MVLFMQRIPMEHQDAAVVGAFFNACRLNNNTELAKEAEEK 587


>ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g18840-like [Cucumis sativus]
          Length = 1096

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/99 (65%), Positives = 79/99 (79%)
 Frame = -2

Query: 297  GVQPDAITFIALLSVCRHRGLVEMGETYFLSMTEEYEIQPETDHFACMIDLYGRANQLDK 118
            G +PDAITF+ALLS CRH GLVE+GE +F SM+ +Y I PE DH+ACMIDLYGRANQLDK
Sbjct: 908  GFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDK 967

Query: 117  AIAFMGKLPVEEDAVILGTFLNACKSNKNVELAGAVEEK 1
            A+ FM K+P++ DAVI G FLNAC+ N N ELA   E++
Sbjct: 968  ALEFMRKIPIQLDAVIWGAFLNACRINGNAELARKAEDE 1006


Top