BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00016120
         (1214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-bin...   235   2e-59
ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein ...   227   4e-57
ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arab...   227   4e-57
ref|XP_002529595.1| RNA binding motif protein, putative [Ricinus...   224   3e-56
dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana]           224   4e-56

>ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
           protein 1 [Vitis vinifera] gi|147789032|emb|CAN75783.1|
           hypothetical protein VITISV_022491 [Vitis vinifera]
          Length = 250

 Score =  235 bits (599), Expect = 2e-59
 Identities = 120/185 (64%), Positives = 139/185 (75%)
 Frame = +3

Query: 255 KPSRSGGLAPSKSTVYVSNLDYTLTNCDIFTIFSTFGKVAKVTVLKDRQNRQSRGVAFVL 434
           + S SG LAPSKSTVYVSNLDYTLTN D+FTIFSTFGKVAKVT+LKDR  R SRGVAFVL
Sbjct: 39  RSSGSGSLAPSKSTVYVSNLDYTLTNSDLFTIFSTFGKVAKVTILKDRHTRHSRGVAFVL 98

Query: 435 FVARNDAVKAAKEINGKILNGRTLTASIASDNGRAAEFIRRKVYKDKSKCYECGEIGHLS 614
           FV+R++A+ AA+E+NGK+LN RTLTASIA+DNGRAAEFIRR+VYKDKS+CYECGE GHLS
Sbjct: 99  FVSRDEAIAAAREMNGKVLNKRTLTASIAADNGRAAEFIRRRVYKDKSRCYECGEGGHLS 158

Query: 615 YDCPKNQLGPREKPEPSNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNWASVVDRDAG 794
           Y+CP+NQLGPRE+P P  +                              NWASVVD  A 
Sbjct: 159 YECPRNQLGPRERPVP-KRSRRGQGGSEARQNGDHDNGGSDGGEAFEDDNWASVVDTGAD 217

Query: 795 ERLLE 809
           +RLL+
Sbjct: 218 QRLLK 222


>ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
           thaliana] gi|12322795|gb|AAG51392.1|AC011560_24
           hypothetical protein; 114721-113936 [Arabidopsis
           thaliana] gi|54261729|gb|AAV31168.1| At3g10400
           [Arabidopsis thaliana] gi|61656137|gb|AAX49371.1|
           At3g10400 [Arabidopsis thaliana]
           gi|332641379|gb|AEE74900.1| small nuclear
           ribonucleoprotein 31 kDa protein [Arabidopsis thaliana]
          Length = 261

 Score =  227 bits (579), Expect = 4e-57
 Identities = 115/185 (62%), Positives = 136/185 (73%), Gaps = 3/185 (1%)
 Frame = +3

Query: 267 SGGLAPSKSTVYVSNLDYTLTNCDIFTIFSTFGKVAKVTVLKDRQNRQSRGVAFVLFVAR 446
           SGGLAPSKST+YVSNLD++LTN DI T+FSTFGKVA+VTVLKDR  RQSRGVAFVL+V+R
Sbjct: 49  SGGLAPSKSTLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSR 108

Query: 447 NDAVKAAKEINGKILNGRTLTASIASDNGRAAEFIRRKVYKDKSKCYECGEIGHLSYDCP 626
            DA KAA+ ++ KILNGR LT SIA+DNGRA+EFI+++VYKDKS+CYECG+ GHLSY+CP
Sbjct: 109 EDAAKAARSMDAKILNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECP 168

Query: 627 KNQLGPREKPEPSNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---NWASVVDRDAGE 797
           KNQLGPRE+P P  K                                 NWASVVD +AGE
Sbjct: 169 KNQLGPRERPPPPKKRGRRKEEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNEAGE 228

Query: 798 RLLER 812
           RL +R
Sbjct: 229 RLRKR 233


>ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
           lyrata] gi|297328506|gb|EFH58925.1| hypothetical protein
           ARALYDRAFT_897216 [Arabidopsis lyrata subsp. lyrata]
          Length = 257

 Score =  227 bits (579), Expect = 4e-57
 Identities = 115/182 (63%), Positives = 135/182 (74%)
 Frame = +3

Query: 267 SGGLAPSKSTVYVSNLDYTLTNCDIFTIFSTFGKVAKVTVLKDRQNRQSRGVAFVLFVAR 446
           SGGLAPSKST+YVSNLD++LTN DI T+FSTFGKVA+VTVLKDR  RQSRGVAFVL+V+R
Sbjct: 49  SGGLAPSKSTLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSR 108

Query: 447 NDAVKAAKEINGKILNGRTLTASIASDNGRAAEFIRRKVYKDKSKCYECGEIGHLSYDCP 626
            DA KAA+ ++ KILNGR LT SIA+DNGRA+EFI+++VYKDKS+CYECG+ GHLSY+CP
Sbjct: 109 EDAAKAARSMDAKILNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECP 168

Query: 627 KNQLGPREKPEPSNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNWASVVDRDAGERLL 806
           KNQLGPRE+P P  K                              NWASVVD +AGERL 
Sbjct: 169 KNQLGPRERPPPPKKRGRRKEDEGEAEEIRDWSAAPSLEGFEEE-NWASVVDNEAGERLR 227

Query: 807 ER 812
            R
Sbjct: 228 MR 229


>ref|XP_002529595.1| RNA binding motif protein, putative [Ricinus communis]
           gi|223530928|gb|EEF32787.1| RNA binding motif protein,
           putative [Ricinus communis]
          Length = 217

 Score =  224 bits (572), Expect = 3e-56
 Identities = 105/134 (78%), Positives = 127/134 (94%)
 Frame = +3

Query: 255 KPSRSGGLAPSKSTVYVSNLDYTLTNCDIFTIFSTFGKVAKVTVLKDRQNRQSRGVAFVL 434
           K + SGGLAPSKSTVYVSNLDY+LTN D+ T+FSTFGK+A+VTVLKD+Q+RQS+GVAF+ 
Sbjct: 39  KSNGSGGLAPSKSTVYVSNLDYSLTNSDLHTLFSTFGKIARVTVLKDKQSRQSKGVAFIQ 98

Query: 435 FVARNDAVKAAKEINGKILNGRTLTASIASDNGRAAEFIRRKVYKDKSKCYECGEIGHLS 614
           FV+R+DAV AAK+++ KILNGRTL+ASIASDNGRAAEFI+++VYKDKS+CYECGEIGHLS
Sbjct: 99  FVSRDDAVSAAKQMDKKILNGRTLSASIASDNGRAAEFIKKRVYKDKSRCYECGEIGHLS 158

Query: 615 YDCPKNQLGPREKP 656
           Y+CPKNQLGPRE+P
Sbjct: 159 YECPKNQLGPRERP 172


>dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana]
          Length = 261

 Score =  224 bits (570), Expect = 4e-56
 Identities = 114/185 (61%), Positives = 134/185 (72%), Gaps = 3/185 (1%)
 Frame = +3

Query: 267 SGGLAPSKSTVYVSNLDYTLTNCDIFTIFSTFGKVAKVTVLKDRQNRQSRGVAFVLFVAR 446
           SGGLAPSKST+YVSNLD++LTN DI T+FSTFGKVA+VTVLKDR  RQSRGVAFVL+V R
Sbjct: 49  SGGLAPSKSTLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVPR 108

Query: 447 NDAVKAAKEINGKILNGRTLTASIASDNGRAAEFIRRKVYKDKSKCYECGEIGHLSYDCP 626
            DA KAA+ ++ KILNGR LT SIA+DNG A+EFI+++VYKDKS+CYECG+ GHLSY+CP
Sbjct: 109 EDAAKAARSMDAKILNGRKLTVSIAADNGLASEFIKKRVYKDKSRCYECGDEGHLSYECP 168

Query: 627 KNQLGPREKPEPSNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---NWASVVDRDAGE 797
           KNQLGPRE+P P  K                                 NWASVVD +AGE
Sbjct: 169 KNQLGPRERPPPPKKRGRRKEEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNEAGE 228

Query: 798 RLLER 812
           RL +R
Sbjct: 229 RLRKR 233