BLASTX nr result
ID: Lithospermum22_contig00016082
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00016082
(1580 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g... 366 1e-98
ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g... 358 3e-96
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei... 338 2e-90
ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi... 333 8e-89
ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumi... 333 8e-89
>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
gi|222850098|gb|EEE87645.1| f-box family protein [Populus
trichocarpa]
Length = 410
Score = 366 bits (939), Expect = 1e-98
Identities = 204/427 (47%), Positives = 268/427 (62%), Gaps = 4/427 (0%)
Frame = +3
Query: 33 DWSDLPGELVELISSHLPTETDVIRFRSVCSTWRSSTNKSGGSGTLSSFPSRFPILPNQG 212
+W+ LP +L+ELIS L T TD++RFRSVC++WRSS S LSS + F ILPN G
Sbjct: 3 EWTHLPKDLIELISKCLDTSTDLLRFRSVCNSWRSSIPPK--SPRLSS--NTFKILPNDG 58
Query: 213 ISDTCWGFHLSKRTLYQLRPPFPLLLDSTNHNND----WIIKLERDNPTRMHLLSPLSTS 380
IS T +GF L KR+++ + P +HN W++K+E D P + HL PLS
Sbjct: 59 ISHTSFGFSLFKRSIFLIGLP-------NSHNQTDLQGWLVKIEEDVPGKKHLFDPLSRC 111
Query: 381 LFNPLPPQFPRSFDSSKFPIFELGNEFTLQYINYRPLANSIGDAGNLYMEKXXXXXXXXX 560
L PR D I ELG+E+ L +++Y+P ++S DAGNLYMEK
Sbjct: 112 RSTSLHHSLPRVLDLMNLRIRELGHEYVLHHVSYKPNSSSFTDAGNLYMEKVVMIWLNCE 171
Query: 561 XXXXXXTFSFVLLTIHISGKLVMYKSGDKKWTVIDDLPAPYDDVIFKGGCFYAVDTTGRA 740
FVLLTIH+SGKL M+KSGDK+WT+I+++P+P+DDVI G FYAVD TGR
Sbjct: 172 T-------EFVLLTIHVSGKLAMFKSGDKRWTIINEMPSPFDDVIVYKGRFYAVDNTGRT 224
Query: 741 VLVEFNPASSTPIITPVAESVHDGDRKYLVESCGDLLLVDMYLSGGPEDDFGYIEGFQFY 920
V+V + V + V GD+KYLVES GDLLLVDMYLS + D G G
Sbjct: 225 VVVALDTDLGL-----VGDPVFGGDKKYLVESKGDLLLVDMYLS--IDTDEGLSIGNDVV 277
Query: 921 EDFDCYMSERTVKFKVFKLDKDMHRWEEMDSLGDMIIFLGDNSTFSALASEINSSCKGNC 1100
+D YMSERTV+FKVFKL+++ W E+ +L D ++FLGD+STFSA ASE+ S CKGNC
Sbjct: 278 QDLVQYMSERTVRFKVFKLNEEGKSWIEVKNLEDRVLFLGDDSTFSASASEL-SGCKGNC 336
Query: 1101 IFFTDQFYSCKEEEEGGVWKSRGIGVFDMETGKIGPIGDNPGYSALFWPPPDWVYSTATI 1280
IFF D F+ +EE + G R IGVF++E+G IGP+ + P YS +FWPPPDW+ ST+
Sbjct: 337 IFFEDNFFYSREEGDDGSMIGRDIGVFELESGCIGPLRNFPDYSKMFWPPPDWIASTSLE 396
Query: 1281 EEAMEQL 1301
+ QL
Sbjct: 397 VQNQNQL 403
>ref|XP_002305539.1| f-box family protein [Populus trichocarpa]
gi|222848503|gb|EEE86050.1| f-box family protein [Populus
trichocarpa]
Length = 469
Score = 358 bits (918), Expect = 3e-96
Identities = 202/418 (48%), Positives = 261/418 (62%), Gaps = 4/418 (0%)
Frame = +3
Query: 33 DWSDLPGELVELISSHLPTETDVIRFRSVCSTWRSSTNKSGGSGTLSSFPSRFPILPNQG 212
+W+ LP +L+ELIS L T TD++RFRSVC++WRSS LSS + F ILPN G
Sbjct: 3 EWTHLPKDLMELISKRLDTSTDLLRFRSVCNSWRSSIPPE--PPCLSS--NTFKILPNDG 58
Query: 213 ISDTCWGFHLSKRTLYQLRPPFPLLLDSTNHNND----WIIKLERDNPTRMHLLSPLSTS 380
IS T +GF L KRT++ + P +HN W+IK+E D P + HL PLS
Sbjct: 59 ISHTSFGFSLFKRTVFLVGLP-------NSHNQTDTQGWLIKIEEDVPGKKHLFDPLSRC 111
Query: 381 LFNPLPPQFPRSFDSSKFPIFELGNEFTLQYINYRPLANSIGDAGNLYMEKXXXXXXXXX 560
LP PR D I ELG+E+ L ++NY+P ++S DAGNLYMEK
Sbjct: 112 RSTSLPNNLPRVLDLMNLRIRELGHEYVLHHLNYKPNSSSFTDAGNLYMEKVVMIWLNSL 171
Query: 561 XXXXXXTFSFVLLTIHISGKLVMYKSGDKKWTVIDDLPAPYDDVIFKGGCFYAVDTTGRA 740
FVLLTIH+SGKL ++KSGDK+WT+I+++P+P+DDVI G FYAVD TGR
Sbjct: 172 T-------EFVLLTIHVSGKLAIFKSGDKRWTIINEMPSPFDDVIVYKGRFYAVDNTGRT 224
Query: 741 VLVEFNPASSTPIITPVAESVHDGDRKYLVESCGDLLLVDMYLSGGPEDDFGYIEGFQFY 920
V+V + + V V GD+KYLVES GDLLLVDMYLS + D G G
Sbjct: 225 VVVAMDTN-----LGLVGNPVFGGDKKYLVESKGDLLLVDMYLS--IDSDEGLSIGHDVV 277
Query: 921 EDFDCYMSERTVKFKVFKLDKDMHRWEEMDSLGDMIIFLGDNSTFSALASEINSSCKGNC 1100
+D YMSERTV FKVFKL+++ W E++ L D ++FLGD+ TFSA ASE+ S CKGNC
Sbjct: 278 QDLVQYMSERTVWFKVFKLNEEGKCWIEVNDLEDRVLFLGDDLTFSASASEL-SGCKGNC 336
Query: 1101 IFFTDQFYSCKEEEEGGVWKSRGIGVFDMETGKIGPIGDNPGYSALFWPPPDWVYSTA 1274
IFF D F+ + E + G R IGVF++E+G IGP+ + P S +FWPPPDWV ST+
Sbjct: 337 IFFNDDFFYSRGEGDDGSLFGRDIGVFELESGCIGPLRNFPDNSKMFWPPPDWVASTS 394
>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
vinifera]
Length = 387
Score = 338 bits (868), Expect = 2e-90
Identities = 191/417 (45%), Positives = 257/417 (61%), Gaps = 3/417 (0%)
Frame = +3
Query: 33 DWSDLPGELVELISSHLPTETDVIRFRSVCSTWRSSTNKSGGSGTLSSFPSRFPILPNQG 212
+W++LP +L+ LI+ L + D++RFRSVCS+WRSST S S PILP G
Sbjct: 3 EWANLPRDLLHLIAKRLDSHFDLLRFRSVCSSWRSSTPSKP-----RSIFSHLPILPTTG 57
Query: 213 ISDTCWGFHLSKRTLYQLRPPFPLLLDSTNHN--NDWIIKLERDNPTRMHLLSPLSTSLF 386
S+ W F+LSKR++ QL P DS N W+IK+E D + L++PL+T F
Sbjct: 58 FSEITWAFYLSKRSILQLGLP-----DSRAQTTPNSWLIKIEEDPSGVIRLINPLTTFKF 112
Query: 387 NPLPPQFPRSFDSSKFPIFELGNEFTLQYINYRPLANSIGDAGNLYMEKXXXXXXXXXXX 566
LPP FP++FD S +FELG E+ L+Y++YRP N+ G+LYMEK
Sbjct: 113 RHLPPDFPKTFDFSGLRVFELGQEYVLEYMDYRPPGNAY--LGSLYMEKVAFCSGNGD-- 168
Query: 567 XXXXTFSFVLLTIHISGKLVMYKSGDKKWTVIDDLPAPYDDVIFKGGCFYAVDTTGRAVL 746
F LLTIH+SGKL M++SGDKKW +IDD+ +PYDDVIF G FYAVD TGR V+
Sbjct: 169 ------DFWLLTIHLSGKLAMFRSGDKKWMIIDDMQSPYDDVIFFDGKFYAVDNTGRTVV 222
Query: 747 VEFNPASSTPIITPVAESVHDGDRKYLVESCGDLLLVDMYLSGGPEDDFGYIEGFQFYED 926
V+ SS P++ A SV GD+K LVES G+LLLVD Y + +DD +
Sbjct: 223 VDVADGSS-PVVNLAASSVFGGDKKVLVESEGELLLVDTYFTMYHDDD-----------E 270
Query: 927 FDCYMSERTVKFKVFKLDKDMHRWEEMDSLGDMIIFLGDNSTFSALASEINSSCKGNCIF 1106
+M ER + FKVF+LD+ +W E++SLGD ++FLGD+S+FSA AS+ CKGN I
Sbjct: 271 HVRWMIERMIHFKVFRLDQREQKWVEIESLGDRLLFLGDDSSFSARASDF-YGCKGNSIC 329
Query: 1107 FTD-QFYSCKEEEEGGVWKSRGIGVFDMETGKIGPIGDNPGYSALFWPPPDWVYSTA 1274
FT+ F+S EE++ +S IGVFD+++G IGP+ YS WPPP WV ST+
Sbjct: 330 FTNISFFSDAEEDDAS--RSGTIGVFDLDSGSIGPLSSYANYSKTIWPPPAWVSSTS 384
>ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
Length = 458
Score = 333 bits (854), Expect = 8e-89
Identities = 185/415 (44%), Positives = 251/415 (60%), Gaps = 1/415 (0%)
Frame = +3
Query: 33 DWSDLPGELVELISSHLPTETDVIRFRSVCSTWRSSTNKSGGSGTLSSFPSRFPILPNQG 212
+WS LP +L+ LIS L D +RFRSVCS+WRS S + P RFP LPN G
Sbjct: 3 EWSHLPKDLLYLISQRLQNPFDTMRFRSVCSSWRSVV-----SPKRHTLPVRFPFLPNHG 57
Query: 213 ISDTCWGFHLSKRTLYQLRPPFPLLLDSTNHNNDWIIKLERDNPTRMHLLSPLSTSLFNP 392
ISD WGF+L+KR+++++ P +H++ W+IK+E D + + +PLS S F P
Sbjct: 58 ISDPTWGFNLTKRSIFRVGSPM-------DHSDGWLIKVEEDACGMIKISNPLSKSYFKP 110
Query: 393 LPPQFPRSFDSSKFPIFELGNEFTLQYINYRPLANSIGDAGNLYMEKXXXXXXXXXXXXX 572
LP FP+ + FP+ EL E+ L Y+N+ P+ + GDAG+LY EK
Sbjct: 111 LPKNFPKVLNLLNFPVLELCQEYVLHYLNFWPVRHRPGDAGDLYREKIAYKCLNYDGS-- 168
Query: 573 XXTFSFVLLTIHISGKLVMYKSGDKKWTVIDDLPAPYDDVIFKGGCFYAVDTTGRAVLVE 752
FVL+TIH+SGKL M+KS D +W+ I PYDDVI G FYAVD +G LVE
Sbjct: 169 ----QFVLVTIHVSGKLAMFKSEDGQWSTIHHTALPYDDVILFNGEFYAVDNSGATFLVE 224
Query: 753 FNPASSTPIITPVAESVHDGDRKYLVESCGDLLLVDMYLSGGPEDDFGYIEGFQFYEDFD 932
S +T +AE V GD+K L+E G+LLLVDMYL+ E+ FG ++G E +
Sbjct: 225 -----SQHKVTLIAEPVFGGDKKILMECNGELLLVDMYLTVDSEEGFG-LDG----EPTE 274
Query: 933 CYMSERTVKFKVFKLDKD-MHRWEEMDSLGDMIIFLGDNSTFSALASEINSSCKGNCIFF 1109
+ E+TV FKVFKL ++ +W + LG+ ++FLG+N +FSA AS + S CKGNCIFF
Sbjct: 275 GVLHEKTVGFKVFKLHRNGSKKWTVVCDLGNTMLFLGENCSFSASASGV-SGCKGNCIFF 333
Query: 1110 TDQFYSCKEEEEGGVWKSRGIGVFDMETGKIGPIGDNPGYSALFWPPPDWVYSTA 1274
TD F C +E V+K I +FD+E G I P+ D+P YS LFWPPP W+ ST+
Sbjct: 334 TDGFL-CPNVDEDDVFKGSDIAIFDLEFGTISPLSDSPMYSRLFWPPPSWITSTS 387
>ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
Length = 404
Score = 333 bits (854), Expect = 8e-89
Identities = 185/415 (44%), Positives = 251/415 (60%), Gaps = 1/415 (0%)
Frame = +3
Query: 33 DWSDLPGELVELISSHLPTETDVIRFRSVCSTWRSSTNKSGGSGTLSSFPSRFPILPNQG 212
+WS LP +L+ LIS L D +RFRSVCS+WRS S + P RFP LPN G
Sbjct: 3 EWSHLPKDLLYLISQRLQNPFDTMRFRSVCSSWRSVV-----SPKRHTLPVRFPFLPNHG 57
Query: 213 ISDTCWGFHLSKRTLYQLRPPFPLLLDSTNHNNDWIIKLERDNPTRMHLLSPLSTSLFNP 392
ISD WGF+L+KR+++++ P +H++ W+IK+E D + + +PLS S F P
Sbjct: 58 ISDPTWGFNLTKRSIFRVGSPM-------DHSDGWLIKVEEDACGMIKISNPLSKSYFKP 110
Query: 393 LPPQFPRSFDSSKFPIFELGNEFTLQYINYRPLANSIGDAGNLYMEKXXXXXXXXXXXXX 572
LP FP+ + FP+ EL E+ L Y+N+ P+ + GDAG+LY EK
Sbjct: 111 LPKNFPKVLNLLNFPVLELCQEYVLHYLNFWPVRHRPGDAGDLYREKIAYKCLNYDGS-- 168
Query: 573 XXTFSFVLLTIHISGKLVMYKSGDKKWTVIDDLPAPYDDVIFKGGCFYAVDTTGRAVLVE 752
FVL+TIH+SGKL M+KS D +W+ I PYDDVI G FYAVD +G LVE
Sbjct: 169 ----QFVLVTIHVSGKLAMFKSEDGQWSTIHHTALPYDDVILFNGEFYAVDNSGATFLVE 224
Query: 753 FNPASSTPIITPVAESVHDGDRKYLVESCGDLLLVDMYLSGGPEDDFGYIEGFQFYEDFD 932
S +T +AE V GD+K L+E G+LLLVDMYL+ E+ FG ++G E +
Sbjct: 225 -----SQHKVTLIAEPVFGGDKKILMECNGELLLVDMYLTVDSEEGFG-LDG----EPTE 274
Query: 933 CYMSERTVKFKVFKLDKD-MHRWEEMDSLGDMIIFLGDNSTFSALASEINSSCKGNCIFF 1109
+ E+TV FKVFKL ++ +W + LG+ ++FLG+N +FSA AS + S CKGNCIFF
Sbjct: 275 GVLHEKTVGFKVFKLHRNGSKKWTVVCDLGNTMLFLGENCSFSASASGV-SGCKGNCIFF 333
Query: 1110 TDQFYSCKEEEEGGVWKSRGIGVFDMETGKIGPIGDNPGYSALFWPPPDWVYSTA 1274
TD F C +E V+K I +FD+E G I P+ D+P YS LFWPPP W+ ST+
Sbjct: 334 TDGFL-CPNVDEDDVFKGSDIAIFDLEFGTISPLSDSPMYSRLFWPPPSWITSTS 387