BLASTX nr result
ID: Lithospermum22_contig00016053
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00016053
(1676 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 190 1e-71
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 196 7e-71
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 192 9e-71
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 169 2e-65
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 184 5e-65
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 190 bits (483), Expect(4) = 1e-71
Identities = 101/272 (37%), Positives = 156/272 (57%), Gaps = 7/272 (2%)
Frame = -3
Query: 1377 YLFIIILDVFNQLMSCNSRHADFVFHPNCKSLGIINICFADDMFIVCGATIKTMQIVNAS 1198
YLF+I +DV ++++ + F +HP CK++G+ ++ FADD+ ++ I++++ +
Sbjct: 665 YLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKV 724
Query: 1197 LKEFGVMSGLKPNLDKSTVYVAGIGDS------EALGISMGNLPVRYLGIPLMTK*LSYA 1036
EF SGL+ +L+KSTVY+AG+ + + S G LPVRYLG+PL+TK LS
Sbjct: 725 FDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTT 784
Query: 1035 DCRPLIDGIRGKIEAWGNAHLSYAGRLVLINTVIFGKEN*WSQCVYLSVAVIEKIEEMVR 856
DC PL++ +R +I +W + LSYAGRL LI++V++ N W L I ++E+M
Sbjct: 785 DCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCS 844
Query: 855 CFLWKWETQGKFLPKASWSNVNASRKEGGLGIKGLRSWNKACMALHMWDICSLKESLWVK 676
FLW K SW V + EGGLG++ L+ N C +W I S SLWVK
Sbjct: 845 AFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVK 904
Query: 675 *IATYKLKGRCFWSLTQR-SIDSWS*RQLIKY 583
+ + L+ FW + Q S SW ++L+KY
Sbjct: 905 WVDQHLLRNASFWEVKQTVSQGSWIWKKLLKY 936
Score = 74.3 bits (181), Expect(4) = 1e-71
Identities = 35/66 (53%), Positives = 43/66 (65%)
Frame = -2
Query: 1594 RCAIKVDIMKAFDSLN*EFL*KILATLNFPVNFVNWIKSCVSTVWLSVCFNGSAHGYFYS 1415
RCAIK+DI KAFDS+ FL + L FP F++WI C++T SV NG GYF S
Sbjct: 593 RCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQS 652
Query: 1414 TRGLRQ 1397
+RGLRQ
Sbjct: 653 SRGLRQ 658
Score = 45.4 bits (106), Expect(4) = 1e-71
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Frame = -1
Query: 572 VGNGRSTNFWHDDWHKRGVLAELFTGEAKKKLRIPKEANVAELISAGNRSRGRH---LTH 402
VGNG+ T+FW+D+W G L E L I + V E + NR + RH + +
Sbjct: 948 VGNGKQTSFWYDNWSDLGQLLERTGDRGLIDLGISRRMTVEEAWT--NRRQRRHRNDVYN 1005
Query: 401 DIEELVQDLPELKEDIQDSIRWKG----YGNCCTTSNI*KSICPVRASPTWANLSWFKGG 234
IE+ ++ + + + +D + W+G + +T + A W + WF
Sbjct: 1006 VIEDALKKSWDTRTETEDKVLWRGKSDVFRTTFSTRDTWHHTRSTSARVPWHKVIWFSHA 1065
Query: 233 FPQ 225
P+
Sbjct: 1066 TPK 1068
Score = 30.0 bits (66), Expect(4) = 1e-71
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 237 RLPTRDCLIRMGMEIDGSCLFCDKE-ENIDHLFF 139
RLPT D +I I C+FC E DHLFF
Sbjct: 1080 RLPTGDRMINWANGIATDCIFCQGTLETRDHLFF 1113
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 196 bits (497), Expect(3) = 7e-71
Identities = 103/272 (37%), Positives = 156/272 (57%), Gaps = 7/272 (2%)
Frame = -3
Query: 1377 YLFIIILDVFNQLMSCNSRHADFVFHPNCKSLGIINICFADDMFIVCGATIKTMQIVNAS 1198
YLF+I ++V + ++ + H + +HP CK L + ++CFADD+ + ++++ V
Sbjct: 238 YLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINI 297
Query: 1197 LKEFGVMSGLKPNLDKSTVYVAGIGDSE------ALGISMGNLPVRYLGIPLMTK*LSYA 1036
KEF SGL +L+KST+Y+AG+ + A + G LPVRYLG+PL+TK ++ A
Sbjct: 298 FKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTA 357
Query: 1035 DCRPLIDGIRGKIEAWGNAHLSYAGRLVLINTVIFGKEN*WSQCVYLSVAVIEKIEEMVR 856
D PL+D +R KI +W LSYAGRL LIN+VI N W L I++IE++
Sbjct: 358 DYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCS 417
Query: 855 CFLWKWETQGKFLPKASWSNVNASRKEGGLGIKGLRSWNKACMALHMWDICSLKESLWVK 676
FLW K +W+++ ++EGGLGIK L NK +W + S + SLWV
Sbjct: 418 AFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVN 477
Query: 675 *IATYKLKGRCFWSLTQR-SIDSWS*RQLIKY 583
+ TY ++ FWS R S+ SW ++L+KY
Sbjct: 478 WVWTYIIRKGSFWSANDRSSLGSWMWKKLLKY 509
Score = 80.9 bits (198), Expect(3) = 7e-71
Identities = 39/67 (58%), Positives = 46/67 (68%)
Frame = -2
Query: 1597 PRCAIKVDIMKAFDSLN*EFL*KILATLNFPVNFVNWIKSCVSTVWLSVCFNGSAHGYFY 1418
PRCA+K+DI KAFDS+ +FL L LNFP NF +WIK C+ST SV NG G+F
Sbjct: 165 PRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFG 224
Query: 1417 STRGLRQ 1397
S RGLRQ
Sbjct: 225 SKRGLRQ 231
Score = 40.4 bits (93), Expect(3) = 7e-71
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 9/121 (7%)
Frame = -1
Query: 572 VGNGRSTNFWHDDWHKRGVLAELFTGEAKKKLRIPKEANVAELISAGNRSRGRHLTHD-I 396
+ +G ST+FW+D+W + G L ++ + IP A VA ++++ R ++ I
Sbjct: 521 IKSGSSTSFWYDNWSQLGQLVDVTNARRTIDMGIPLAATVATVLASHRTKHHRTAIYNKI 580
Query: 395 EELVQD-LPELKEDIQDSIRWKGYGNCCTTSNI*KSICPVRASPTWANL-------SWFK 240
E +Q L + D W+ G+ S I K TW N+ W+K
Sbjct: 581 EAEIQSILQRERSGAPDIFLWRSSGDNFRQSFITK--------VTWHNIRVIHTHRQWYK 632
Query: 239 G 237
G
Sbjct: 633 G 633
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 192 bits (487), Expect(3) = 9e-71
Identities = 102/272 (37%), Positives = 156/272 (57%), Gaps = 7/272 (2%)
Frame = -3
Query: 1377 YLFIIILDVFNQLMSCNSRHADFVFHPNCKSLGIINICFADDMFIVCGATIKTMQIVNAS 1198
YLF+I +DV ++++ + +F +HP CK+LG+ ++CFADD+ I+ I+++ +
Sbjct: 386 YLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKV 445
Query: 1197 LKEFGVMSGLKPNLDKSTVYVAGIGD------SEALGISMGNLPVRYLGIPLMTK*LSYA 1036
L +F GLK ++K+T+Y+AG+ D S +G LPVRYLG+PL+TK L+ +
Sbjct: 446 LNQFAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTS 505
Query: 1035 DCRPLIDGIRGKIEAWGNAHLSYAGRLVLINTVIFGKEN*WSQCVYLSVAVIEKIEEMVR 856
D PLID IR +I W + +LS+AGRL LIN+V++ N W L I +I +
Sbjct: 506 DYSPLIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSITNFWMNAFRLPRECINEINRISS 565
Query: 855 CFLWKWETQGKFLPKASWSNVNASRKEGGLGIKGLRSWNKACMALHMWDICSLKESLWVK 676
LW K SW + +KEGGLG++ LR NK +W + S ++SLWVK
Sbjct: 566 ALLWSGPELNPKKAKVSWDEICKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVK 625
Query: 675 *IATYKLKGRCFWSL-TQRSIDSWS*RQLIKY 583
LK FWS+ T ++ SW R+L+K+
Sbjct: 626 WTRMNLLKKESFWSIGTHSTLGSWIWRRLLKH 657
Score = 78.6 bits (192), Expect(3) = 9e-71
Identities = 37/66 (56%), Positives = 45/66 (68%)
Frame = -2
Query: 1594 RCAIKVDIMKAFDSLN*EFL*KILATLNFPVNFVNWIKSCVSTVWLSVCFNGSAHGYFYS 1415
RCA+K+DI KAFDSL FL +LA +NFP F++WI C+ST S+ NG GYF S
Sbjct: 314 RCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGELAGYFRS 373
Query: 1414 TRGLRQ 1397
RGLRQ
Sbjct: 374 ARGLRQ 379
Score = 46.2 bits (108), Expect(3) = 9e-71
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = -1
Query: 572 VGNGRSTNFWHDDWHKRGVLAELFTGEAKKKLRIPKEANVAELISAGNRSRGR-HLTHDI 396
V NG +T+FW D+W ++G L L + I + +AE S R R R + ++
Sbjct: 669 VNNGVNTSFWFDNWSEKGPLINLTGARGAIDMGISRHMTLAEAWSRRRRKRHRVEILNEF 728
Query: 395 EE-LVQDLPELKEDIQDSIRWKG 330
EE L+Q +++D+I W+G
Sbjct: 729 EEILLQKYQHRNIELEDAILWRG 751
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 169 bits (427), Expect(3) = 2e-65
Identities = 94/271 (34%), Positives = 149/271 (54%), Gaps = 7/271 (2%)
Frame = -3
Query: 1377 YLFIIILDVFNQLMSCNSRHADFVFHPNCKSLGIINICFADDMFIVCGATIKTMQIVNAS 1198
YLF+I +DV ++++ + F FHP C+ LG+ ++ FADD+ ++ ++++ +
Sbjct: 312 YLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEV 371
Query: 1197 LKEFGVMSGLKPNLDKSTVYVAGIGDSEALGIS------MGNLPVRYLGIPLMTK*LSYA 1036
EF SGL+ +L+KST+Y+AG+ I+ +G LPVRYLG+PL+TK L+ A
Sbjct: 372 FDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSA 431
Query: 1035 DCRPLIDGIRGKIEAWGNAHLSYAGRLVLINTVIFGKEN*WSQCVYLSVAVIEKIEEMVR 856
D PL++ I+ +I W S+AGR LI +V++ N W L I +I+++
Sbjct: 432 DYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCS 491
Query: 855 CFLWKWETQGKFLPKASWSNVNASRKEGGLGIKGLRSWNKACMALHMWDICSLKESLWVK 676
FLW K SW V + EGGLG++ L+ N +W I S SLW K
Sbjct: 492 SFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTK 551
Query: 675 *IATYKLKGRCFWSLTQ-RSIDSWS*RQLIK 586
+A Y ++ + WSL Q S+ SW R+++K
Sbjct: 552 WVAEYLIRKKSIWSLKQSTSMGSWIWRKILK 582
Score = 72.8 bits (177), Expect(3) = 2e-65
Identities = 35/66 (53%), Positives = 42/66 (63%)
Frame = -2
Query: 1594 RCAIKVDIMKAFDSLN*EFL*KILATLNFPVNFVNWIKSCVSTVWLSVCFNGSAHGYFYS 1415
RCAIK+DI KAFDS+ FL L +NF F++WI C++T SV NG GYF S
Sbjct: 240 RCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQS 299
Query: 1414 TRGLRQ 1397
RGLRQ
Sbjct: 300 KRGLRQ 305
Score = 57.0 bits (136), Expect(3) = 2e-65
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Frame = -1
Query: 572 VGNGRSTNFWHDDWHKRGVLAELFTGEAKKKLRIPKEANVAELISAGNRSRGRH---LTH 402
VGNG S +FW+D W G L + + L IP+EA+VA+ + RSR RH L +
Sbjct: 595 VGNGESASFWYDHWSAHGRLIDTVGDKGTIDLGIPREASVADAWT--RRSRRRHRTSLLN 652
Query: 401 DIEELVQDLPELKEDIQDSIRWKGYGNC----CTTSNI*KSICPVRASPTWANLSWFKGG 234
+IEE++ D +D++ W+G + +T + I ++ +W WF+
Sbjct: 653 EIEEMMAYQRIHHSDAEDTVLWRGKNDVFKPHFSTRDTWHLIKATSSTVSWHKGVWFRHA 712
Query: 233 FPQ 225
P+
Sbjct: 713 TPK 715
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 184 bits (467), Expect(3) = 5e-65
Identities = 96/272 (35%), Positives = 156/272 (57%), Gaps = 7/272 (2%)
Frame = -3
Query: 1377 YLFIIILDVFNQLMSCNSRHADFVFHPNCKSLGIINICFADDMFIVCGATIKTMQIVNAS 1198
YLF+I ++V ++++ + F FHP CK+LG+ ++CFADD+ I+ ++++ +
Sbjct: 70 YLFVISMEVLSKMLDQAAGGKRFGFHPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEV 129
Query: 1197 LKEFGVMSGLKPNLDKSTVYVAGIGDSEALGI------SMGNLPVRYLGIPLMTK*LSYA 1036
+ F SGL+ N++K+T+Y AG+ D + +G LPVRYLG+PL+TK L+
Sbjct: 130 MNLFAKRSGLQINMEKTTLYTAGVSDHNRYMMISRYPFGLGQLPVRYLGLPLVTKRLTKE 189
Query: 1035 DCRPLIDGIRGKIEAWGNAHLSYAGRLVLINTVIFGKEN*WSQCVYLSVAVIEKIEEMVR 856
D PL + IR +I W + +LS+AGRL LI++V++ N W L A +++I +
Sbjct: 190 DLSPLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAFRLPSACLKEINSICS 249
Query: 855 CFLWKWETQGKFLPKASWSNVNASRKEGGLGIKGLRSWNKACMALHMWDICSLKESLWVK 676
FLW + K SW ++ ++EGGLG++ L N + +W + S +SLWVK
Sbjct: 250 AFLWSGPELHRRKAKVSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVK 309
Query: 675 *IATYKLKGRCFWSLT-QRSIDSWS*RQLIKY 583
LK FWSLT S+ SW ++++KY
Sbjct: 310 WSKMNLLKQESFWSLTPNSSLGSWMWKKMLKY 341
Score = 68.9 bits (167), Expect(3) = 5e-65
Identities = 32/63 (50%), Positives = 41/63 (65%)
Frame = -2
Query: 1585 IKVDIMKAFDSLN*EFL*KILATLNFPVNFVNWIKSCVSTVWLSVCFNGSAHGYFYSTRG 1406
+K+DI KAFDSL FL L+ +NFP F++WI C++T SV NG GYF S RG
Sbjct: 1 MKIDISKAFDSLQWSFLINALSAMNFPGEFIHWISRCITTTSFSVQVNGELAGYFRSARG 60
Query: 1405 LRQ 1397
+RQ
Sbjct: 61 IRQ 63
Score = 44.3 bits (103), Expect(3) = 5e-65
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 11/123 (8%)
Frame = -1
Query: 572 VGNGRSTNFWHDDWHKRGVLAELFTGEAKKKLRIPKEANVAELISAGNRSRGRHLT---H 402
V NG T+FW D+W G L ++ + L I + VAE S NR R +H T +
Sbjct: 353 VNNGARTSFWFDNWSGMGHLMDVTGQRGQIDLGISRNKTVAEAWS--NRRRRKHRTEQLN 410
Query: 401 DIEELVQDLPELKEDI-QDSIRWKGYGNCCTTSNI*KSICPVRASPTW-------ANLSW 246
DIE + + + + +D+ W+G G+ TS TW ++W
Sbjct: 411 DIEAALNQKYQTRNLLREDATLWRGKGDVFKTS--------FSTKDTWNQVRKKSNEVAW 462
Query: 245 FKG 237
+KG
Sbjct: 463 YKG 465