BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00015934
         (851 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabi...   119   1e-24
ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis tha...   117   3e-24
gb|AAM65969.1| unknown [Arabidopsis thaliana]                         116   7e-24
ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus comm...   113   5e-23
ref|XP_002325451.1| predicted protein [Populus trichocarpa] gi|2...   108   2e-21

>ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabidopsis lyrata subsp.
           lyrata] gi|297335614|gb|EFH66031.1| DNA polymerase delta
           subunit 4 family [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score =  119 bits (297), Expect = 1e-24
 Identities = 69/134 (51%), Positives = 82/134 (61%), Gaps = 6/134 (4%)
 Frame = +1

Query: 121 GFYKQKKS---GGITKSKGNS---TPKHSATCGSEAAQPPALVTSRGTPDLKDNYDDNEX 282
           GFYKQ KS   GGI+KSK +S   TPKH+A  GS+  QP AL+ S G+ DL ++YD  E 
Sbjct: 8   GFYKQTKSNITGGISKSKPSSRKVTPKHAAAQGSDVIQPAALI-SHGSLDLNEDYDKEE- 65

Query: 283 XXXXXXXXXXXXXXXXDNYDDNEEMLRQFDMNMAYGPCLGMSRLDRWERAVALGLNPPET 462
                                  EMLRQFDMN+AYGPCLGM+RLDRWERA+ LG+NPP  
Sbjct: 66  -----------------------EMLRQFDMNIAYGPCLGMTRLDRWERALRLGMNPPNE 102

Query: 463 IEHLLKLSDVRLGC 504
           IE LLK   V+  C
Sbjct: 103 IEKLLKTGKVQQDC 116


>ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis thaliana]
           gi|98961061|gb|ABF59014.1| At1g09815 [Arabidopsis
           thaliana] gi|332190377|gb|AEE28498.1| DNA polymerase
           delta subunit 4 [Arabidopsis thaliana]
          Length = 124

 Score =  117 bits (293), Expect = 3e-24
 Identities = 68/134 (50%), Positives = 80/134 (59%), Gaps = 6/134 (4%)
 Frame = +1

Query: 121 GFYKQKKS---GGITKSKGNS---TPKHSATCGSEAAQPPALVTSRGTPDLKDNYDDNEX 282
           GFYKQ KS   GGI+KSK +S    PKH+A  GS+  QP AL+ S G+ DL ++YD  E 
Sbjct: 10  GFYKQTKSNITGGISKSKPSSRKVAPKHAAAQGSDVTQPAALI-SHGSVDLNEDYDKEE- 67

Query: 283 XXXXXXXXXXXXXXXXDNYDDNEEMLRQFDMNMAYGPCLGMSRLDRWERAVALGLNPPET 462
                                  EMLRQFDMN+ YGPCLGM+RLDRWERAV LG+NPP  
Sbjct: 68  -----------------------EMLRQFDMNITYGPCLGMTRLDRWERAVRLGMNPPNE 104

Query: 463 IEHLLKLSDVRLGC 504
           IE LLK   V+  C
Sbjct: 105 IEKLLKTGKVQQDC 118


>gb|AAM65969.1| unknown [Arabidopsis thaliana]
          Length = 124

 Score =  116 bits (290), Expect = 7e-24
 Identities = 67/134 (50%), Positives = 80/134 (59%), Gaps = 6/134 (4%)
 Frame = +1

Query: 121 GFYKQKKS---GGITKSKGNS---TPKHSATCGSEAAQPPALVTSRGTPDLKDNYDDNEX 282
           GFYKQ KS   GGI+KSK +S    PKH+A  GS+  QP AL+ S G+ DL ++YD  E 
Sbjct: 10  GFYKQTKSNITGGISKSKPSSRKVAPKHAAAQGSDVTQPAALI-SHGSVDLNEDYDKEE- 67

Query: 283 XXXXXXXXXXXXXXXXDNYDDNEEMLRQFDMNMAYGPCLGMSRLDRWERAVALGLNPPET 462
                                  EMLRQFDMN+ YGPCLGM+RLDRW+RAV LG+NPP  
Sbjct: 68  -----------------------EMLRQFDMNITYGPCLGMTRLDRWQRAVRLGMNPPNE 104

Query: 463 IEHLLKLSDVRLGC 504
           IE LLK   V+  C
Sbjct: 105 IEKLLKTGKVQQDC 118


>ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus communis]
           gi|223536760|gb|EEF38401.1| delta DNA polymerase,
           putative [Ricinus communis]
          Length = 126

 Score =  113 bits (283), Expect = 5e-23
 Identities = 66/133 (49%), Positives = 77/133 (57%), Gaps = 6/133 (4%)
 Frame = +1

Query: 124 FYKQKKSG--GITKS----KGNSTPKHSATCGSEAAQPPALVTSRGTPDLKDNYDDNEXX 285
           FY+QKK+   GITKS    K  S PKH+A  GS   QP AL++  G  DL+D+YD N   
Sbjct: 12  FYRQKKTNKTGITKSSSKSKKKSPPKHAAAIGSNITQPTALISHGGALDLQDDYDKN--- 68

Query: 286 XXXXXXXXXXXXXXXDNYDDNEEMLRQFDMNMAYGPCLGMSRLDRWERAVALGLNPPETI 465
                                EE+LRQFDMNMAYGPCLGM+R+ RWERA  LGLNPP+ I
Sbjct: 69  ---------------------EEVLRQFDMNMAYGPCLGMTRVGRWERAQRLGLNPPKQI 107

Query: 466 EHLLKLSDVRLGC 504
           E LLK   V   C
Sbjct: 108 EDLLKGGKVNSEC 120


>ref|XP_002325451.1| predicted protein [Populus trichocarpa] gi|222862326|gb|EEE99832.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score =  108 bits (270), Expect = 2e-21
 Identities = 67/131 (51%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
 Frame = +1

Query: 121 GFYKQKKS-GGITK--SKGNSTPKHSATCGSEAAQPPALVTSRGTPDLKDNYDDNEXXXX 291
           GFY+QKK+  GI K  S   S+  H+AT GS+  QP ALV S  +PDLKD+YD +E    
Sbjct: 10  GFYRQKKNKSGIRKPTSTSKSSLIHAATLGSDITQPTALV-SHDSPDLKDDYDKHE---- 64

Query: 292 XXXXXXXXXXXXXDNYDDNEEMLRQFDMNMAYGPCLGMSRLDRWERAVALGLNPPETIEH 471
                               ++LRQFDMN AYGPCLGMSRL RWERA  LGLNPP+ IE 
Sbjct: 65  --------------------DVLRQFDMNPAYGPCLGMSRLARWERAQRLGLNPPKEIEG 104

Query: 472 LLKLSDVRLGC 504
           LLK   VR  C
Sbjct: 105 LLKGEKVRSEC 115