BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00015853
         (2024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25022.3| unnamed protein product [Vitis vinifera]              951   0.0  
ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containi...   951   0.0  
ref|XP_002316488.1| predicted protein [Populus trichocarpa] gi|2...   924   0.0  
ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containi...   919   0.0  
ref|XP_002515794.1| pentatricopeptide repeat-containing protein,...   918   0.0  

>emb|CBI25022.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score =  951 bits (2457), Expect = 0.0
 Identities = 449/561 (80%), Positives = 518/561 (92%)
 Frame = +2

Query: 2    LVHAYAVGKDMEEALSCVRKMKSEGIELTLVTYSIIVGGFGKVGDTEAAEFWFQEAKEKH 181
            L+HAYAVG+DMEEALSCVRKMK EGIE++LVTYSI+VGGF K+ D EAA+ WF+EAKE+H
Sbjct: 309  LIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERH 368

Query: 182  TTLNAIIYGNIIYAHCQARNMDRAEALVRDMEEEGIDASIDIYHTMMDGYTMISNEEKCI 361
            TTLNAIIYGNIIYAHCQA NM +AEALVR+MEEEGIDA IDIYHTMMDGYT+I NEEKC+
Sbjct: 369  TTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCL 428

Query: 362  VVFNRLKECGFTPSVISYGCLINLYIKMDKIYKALEISENMKSAGINHNIKTYSMLINGF 541
            +VF+RLKECGFTPSVISYGCLINLYIK+ K+ KALE+S+ M+ AGI HN+KTYSMLINGF
Sbjct: 429  IVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGF 488

Query: 542  IKLKDWANAFAIFEDVICDGLKPDVVLYNNIIRAFCGMGNLDRALRTIEDMKKERHKPTS 721
            ++LKDWANAFA+FEDV+ DGLKPDVVLYNNIIRAFCGMGN+DRA+RT+++M+KERH+PT+
Sbjct: 489  VRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTT 548

Query: 722  QTFMPIIHAFAKVGEIRKAHEVFDLMRMSGCIPTVYTYNALILGLVEKHQMEKAVGILDK 901
            +TFMPIIH FA+ G++R+A E+FD+MR SGCIPTV+T+NALILGLVEK QMEKAV ILD+
Sbjct: 549  RTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDE 608

Query: 902  MLLAGVIPNEHTYTTIMNGYASVGDIGKAFEYFAKLKNEGLELDVYTYEALLKACCKSGR 1081
            M LAG+ PNEHTYTTIM+GYAS+GD GKAFEYF KLK EGLELDVYTYEALLKACCKSGR
Sbjct: 609  MSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGR 668

Query: 1082 MQSALAVTKEMNKQGIKRNTYVYNILIDGWARRGDVWEASDLMQQMRQDGVQPDIHTYTS 1261
            MQSALAVT+EM+ Q I RNT+VYNILIDGWARRGDVWEA++LMQQM+Q+GVQPDIHTYTS
Sbjct: 669  MQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTS 728

Query: 1262 FINACCKAGDMQKATKTIEEMKRFGVKPNLKTYTTLINGWARASLPEKALKCFEDMKLTG 1441
            FINACCKAGDMQ+ATKTI+EM+  GVKPN+KTYTTLI+GWARASLPEKALKCF++MK  G
Sbjct: 729  FINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAG 788

Query: 1442 LKPDKAVYHCLITSLLSRAIVAEDYTYRGVLQLCEEVKESGITVDMGTAVHWSRCLRKIE 1621
            LKPDKAVYHCL+TSLLSRA VAE+Y Y GV+ +C E+ E  +TVDMGTAVHWS+CLRKIE
Sbjct: 789  LKPDKAVYHCLMTSLLSRASVAEEYIYSGVVGICREMIECELTVDMGTAVHWSKCLRKIE 848

Query: 1622 STGGAVTEALQKTFPPDWNSH 1684
             TGG +TEALQKTFPPDWNS+
Sbjct: 849  RTGGELTEALQKTFPPDWNSY 869



 Score =  151 bits (382), Expect = 6e-34
 Identities = 91/353 (25%), Positives = 179/353 (50%)
 Frame = +2

Query: 512  KTYSMLINGFIKLKDWANAFAIFEDVICDGLKPDVVLYNNIIRAFCGMGNLDRALRTIED 691
            K + +++  + +  D  +A   FE +   G++P   +Y ++I A+    +++ AL  +  
Sbjct: 269  KEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRK 328

Query: 692  MKKERHKPTSQTFMPIIHAFAKVGEIRKAHEVFDLMRMSGCIPTVYTYNALILGLVEKHQ 871
            MK+E  + +  T+  ++  FAK+ +   A   F   +          Y  +I    +   
Sbjct: 329  MKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACN 388

Query: 872  MEKAVGILDKMLLAGVIPNEHTYTTIMNGYASVGDIGKAFEYFAKLKNEGLELDVYTYEA 1051
            M +A  ++ +M   G+      Y T+M+GY  +G+  K    F +LK  G    V +Y  
Sbjct: 389  MTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGC 448

Query: 1052 LLKACCKSGRMQSALAVTKEMNKQGIKRNTYVYNILIDGWARRGDVWEASDLMQQMRQDG 1231
            L+    K G++  AL V+K M   GIK N   Y++LI+G+ R  D   A  + + + +DG
Sbjct: 449  LINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDG 508

Query: 1232 VQPDIHTYTSFINACCKAGDMQKATKTIEEMKRFGVKPNLKTYTTLINGWARASLPEKAL 1411
            ++PD+  Y + I A C  G+M +A +T++EM++   +P  +T+  +I+G+AR+    +AL
Sbjct: 509  LKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRAL 568

Query: 1412 KCFEDMKLTGLKPDKAVYHCLITSLLSRAIVAEDYTYRGVLQLCEEVKESGIT 1570
            + F+ M+ +G  P    ++ LI  L+ +  + +       +++ +E+  +GI+
Sbjct: 569  EIFDMMRWSGCIPTVHTFNALILGLVEKCQMEK------AVEILDEMSLAGIS 615



 Score =  134 bits (336), Expect = 1e-28
 Identities = 76/256 (29%), Positives = 134/256 (52%)
 Frame = +2

Query: 710  KPTSQTFMPIIHAFAKVGEIRKAHEVFDLMRMSGCIPTVYTYNALILGLVEKHQMEKAVG 889
            KP+ + F  ++  +A+ G++  A   F+ MR  G  PT + Y +LI        ME+A+ 
Sbjct: 265  KPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 324

Query: 890  ILDKMLLAGVIPNEHTYTTIMNGYASVGDIGKAFEYFAKLKNEGLELDVYTYEALLKACC 1069
             + KM   G+  +  TY+ ++ G+A + D   A  +F + K     L+   Y  ++ A C
Sbjct: 325  CVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHC 384

Query: 1070 KSGRMQSALAVTKEMNKQGIKRNTYVYNILIDGWARRGDVWEASDLMQQMRQDGVQPDIH 1249
            ++  M  A A+ +EM ++GI     +Y+ ++DG+   G+  +   +  ++++ G  P + 
Sbjct: 385  QACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVI 444

Query: 1250 TYTSFINACCKAGDMQKATKTIEEMKRFGVKPNLKTYTTLINGWARASLPEKALKCFEDM 1429
            +Y   IN   K G + KA +  + M+  G+K N+KTY+ LING+ R      A   FED+
Sbjct: 445  SYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDV 504

Query: 1430 KLTGLKPDKAVYHCLI 1477
               GLKPD  +Y+ +I
Sbjct: 505  VKDGLKPDVVLYNNII 520


>ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic [Vitis vinifera]
          Length = 929

 Score =  951 bits (2457), Expect = 0.0
 Identities = 449/561 (80%), Positives = 518/561 (92%)
 Frame = +2

Query: 2    LVHAYAVGKDMEEALSCVRKMKSEGIELTLVTYSIIVGGFGKVGDTEAAEFWFQEAKEKH 181
            L+HAYAVG+DMEEALSCVRKMK EGIE++LVTYSI+VGGF K+ D EAA+ WF+EAKE+H
Sbjct: 330  LIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERH 389

Query: 182  TTLNAIIYGNIIYAHCQARNMDRAEALVRDMEEEGIDASIDIYHTMMDGYTMISNEEKCI 361
            TTLNAIIYGNIIYAHCQA NM +AEALVR+MEEEGIDA IDIYHTMMDGYT+I NEEKC+
Sbjct: 390  TTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCL 449

Query: 362  VVFNRLKECGFTPSVISYGCLINLYIKMDKIYKALEISENMKSAGINHNIKTYSMLINGF 541
            +VF+RLKECGFTPSVISYGCLINLYIK+ K+ KALE+S+ M+ AGI HN+KTYSMLINGF
Sbjct: 450  IVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGF 509

Query: 542  IKLKDWANAFAIFEDVICDGLKPDVVLYNNIIRAFCGMGNLDRALRTIEDMKKERHKPTS 721
            ++LKDWANAFA+FEDV+ DGLKPDVVLYNNIIRAFCGMGN+DRA+RT+++M+KERH+PT+
Sbjct: 510  VRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTT 569

Query: 722  QTFMPIIHAFAKVGEIRKAHEVFDLMRMSGCIPTVYTYNALILGLVEKHQMEKAVGILDK 901
            +TFMPIIH FA+ G++R+A E+FD+MR SGCIPTV+T+NALILGLVEK QMEKAV ILD+
Sbjct: 570  RTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDE 629

Query: 902  MLLAGVIPNEHTYTTIMNGYASVGDIGKAFEYFAKLKNEGLELDVYTYEALLKACCKSGR 1081
            M LAG+ PNEHTYTTIM+GYAS+GD GKAFEYF KLK EGLELDVYTYEALLKACCKSGR
Sbjct: 630  MSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGR 689

Query: 1082 MQSALAVTKEMNKQGIKRNTYVYNILIDGWARRGDVWEASDLMQQMRQDGVQPDIHTYTS 1261
            MQSALAVT+EM+ Q I RNT+VYNILIDGWARRGDVWEA++LMQQM+Q+GVQPDIHTYTS
Sbjct: 690  MQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTS 749

Query: 1262 FINACCKAGDMQKATKTIEEMKRFGVKPNLKTYTTLINGWARASLPEKALKCFEDMKLTG 1441
            FINACCKAGDMQ+ATKTI+EM+  GVKPN+KTYTTLI+GWARASLPEKALKCF++MK  G
Sbjct: 750  FINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAG 809

Query: 1442 LKPDKAVYHCLITSLLSRAIVAEDYTYRGVLQLCEEVKESGITVDMGTAVHWSRCLRKIE 1621
            LKPDKAVYHCL+TSLLSRA VAE+Y Y GV+ +C E+ E  +TVDMGTAVHWS+CLRKIE
Sbjct: 810  LKPDKAVYHCLMTSLLSRASVAEEYIYSGVVGICREMIECELTVDMGTAVHWSKCLRKIE 869

Query: 1622 STGGAVTEALQKTFPPDWNSH 1684
             TGG +TEALQKTFPPDWNS+
Sbjct: 870  RTGGELTEALQKTFPPDWNSY 890



 Score =  151 bits (382), Expect = 6e-34
 Identities = 91/353 (25%), Positives = 179/353 (50%)
 Frame = +2

Query: 512  KTYSMLINGFIKLKDWANAFAIFEDVICDGLKPDVVLYNNIIRAFCGMGNLDRALRTIED 691
            K + +++  + +  D  +A   FE +   G++P   +Y ++I A+    +++ AL  +  
Sbjct: 290  KEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRK 349

Query: 692  MKKERHKPTSQTFMPIIHAFAKVGEIRKAHEVFDLMRMSGCIPTVYTYNALILGLVEKHQ 871
            MK+E  + +  T+  ++  FAK+ +   A   F   +          Y  +I    +   
Sbjct: 350  MKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACN 409

Query: 872  MEKAVGILDKMLLAGVIPNEHTYTTIMNGYASVGDIGKAFEYFAKLKNEGLELDVYTYEA 1051
            M +A  ++ +M   G+      Y T+M+GY  +G+  K    F +LK  G    V +Y  
Sbjct: 410  MTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGC 469

Query: 1052 LLKACCKSGRMQSALAVTKEMNKQGIKRNTYVYNILIDGWARRGDVWEASDLMQQMRQDG 1231
            L+    K G++  AL V+K M   GIK N   Y++LI+G+ R  D   A  + + + +DG
Sbjct: 470  LINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDG 529

Query: 1232 VQPDIHTYTSFINACCKAGDMQKATKTIEEMKRFGVKPNLKTYTTLINGWARASLPEKAL 1411
            ++PD+  Y + I A C  G+M +A +T++EM++   +P  +T+  +I+G+AR+    +AL
Sbjct: 530  LKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRAL 589

Query: 1412 KCFEDMKLTGLKPDKAVYHCLITSLLSRAIVAEDYTYRGVLQLCEEVKESGIT 1570
            + F+ M+ +G  P    ++ LI  L+ +  + +       +++ +E+  +GI+
Sbjct: 590  EIFDMMRWSGCIPTVHTFNALILGLVEKCQMEK------AVEILDEMSLAGIS 636



 Score =  134 bits (336), Expect = 1e-28
 Identities = 76/256 (29%), Positives = 134/256 (52%)
 Frame = +2

Query: 710  KPTSQTFMPIIHAFAKVGEIRKAHEVFDLMRMSGCIPTVYTYNALILGLVEKHQMEKAVG 889
            KP+ + F  ++  +A+ G++  A   F+ MR  G  PT + Y +LI        ME+A+ 
Sbjct: 286  KPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 345

Query: 890  ILDKMLLAGVIPNEHTYTTIMNGYASVGDIGKAFEYFAKLKNEGLELDVYTYEALLKACC 1069
             + KM   G+  +  TY+ ++ G+A + D   A  +F + K     L+   Y  ++ A C
Sbjct: 346  CVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHC 405

Query: 1070 KSGRMQSALAVTKEMNKQGIKRNTYVYNILIDGWARRGDVWEASDLMQQMRQDGVQPDIH 1249
            ++  M  A A+ +EM ++GI     +Y+ ++DG+   G+  +   +  ++++ G  P + 
Sbjct: 406  QACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVI 465

Query: 1250 TYTSFINACCKAGDMQKATKTIEEMKRFGVKPNLKTYTTLINGWARASLPEKALKCFEDM 1429
            +Y   IN   K G + KA +  + M+  G+K N+KTY+ LING+ R      A   FED+
Sbjct: 466  SYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDV 525

Query: 1430 KLTGLKPDKAVYHCLI 1477
               GLKPD  +Y+ +I
Sbjct: 526  VKDGLKPDVVLYNNII 541


>ref|XP_002316488.1| predicted protein [Populus trichocarpa] gi|222865528|gb|EEF02659.1|
            predicted protein [Populus trichocarpa]
          Length = 941

 Score =  924 bits (2388), Expect = 0.0
 Identities = 434/571 (76%), Positives = 509/571 (89%)
 Frame = +2

Query: 2    LVHAYAVGKDMEEALSCVRKMKSEGIELTLVTYSIIVGGFGKVGDTEAAEFWFQEAKEKH 181
            L+HAYAVG+DMEEALSCVRKM  EGIE++LVTYSI+VGGF K G+ EAA+ WF++AKE+H
Sbjct: 335  LIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERH 394

Query: 182  TTLNAIIYGNIIYAHCQARNMDRAEALVRDMEEEGIDASIDIYHTMMDGYTMISNEEKCI 361
            T LNA IYGNIIYA+CQA NMDRAEALVR+MEEEGIDA +DIYHTMMDGYTMI NEEKC+
Sbjct: 395  TNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCL 454

Query: 362  VVFNRLKECGFTPSVISYGCLINLYIKMDKIYKALEISENMKSAGINHNIKTYSMLINGF 541
            +VF RLKECGF PSVI+YGCLIN+Y K+ K+ KALE+S+ MKS GI HN+KTYSMLINGF
Sbjct: 455  IVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGF 514

Query: 542  IKLKDWANAFAIFEDVICDGLKPDVVLYNNIIRAFCGMGNLDRALRTIEDMKKERHKPTS 721
            +KLKDW NAFA+FEDVI DGLKPDVVLYNNII+AFCGMGN+DRA+  +++M+KER +PTS
Sbjct: 515  LKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTS 574

Query: 722  QTFMPIIHAFAKVGEIRKAHEVFDLMRMSGCIPTVYTYNALILGLVEKHQMEKAVGILDK 901
            +TFMPIIH FA+ GE+R+A E+FD+MR SGCIPTV+T+NAL+LGLVEK +MEKAV ILD+
Sbjct: 575  RTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDE 634

Query: 902  MLLAGVIPNEHTYTTIMNGYASVGDIGKAFEYFAKLKNEGLELDVYTYEALLKACCKSGR 1081
            M LAGV P+EHTYTTIM+GYA++GD GKAFEYF K++NEGL+LDV+TYEALLKACCKSGR
Sbjct: 635  MALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGR 694

Query: 1082 MQSALAVTKEMNKQGIKRNTYVYNILIDGWARRGDVWEASDLMQQMRQDGVQPDIHTYTS 1261
            MQSALAVT+EMN Q I RNT+VYNILIDGWARRGD+WEA+DLMQQM Q+GVQPDIHTYTS
Sbjct: 695  MQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTS 754

Query: 1262 FINACCKAGDMQKATKTIEEMKRFGVKPNLKTYTTLINGWARASLPEKALKCFEDMKLTG 1441
            FINACCKAGDM +ATKT+EEM+  GVKPN+KTYTTLI+GWA ASLPEKAL CFE++KL G
Sbjct: 755  FINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAG 814

Query: 1442 LKPDKAVYHCLITSLLSRAIVAEDYTYRGVLQLCEEVKESGITVDMGTAVHWSRCLRKIE 1621
            LKPDKAVYHCL+TSLLSRA VAE Y Y G+L +C E+ E  +TVDMGTAV+WS+CLRKIE
Sbjct: 815  LKPDKAVYHCLMTSLLSRATVAEAYIYSGILSICREMIEFELTVDMGTAVYWSKCLRKIE 874

Query: 1622 STGGAVTEALQKTFPPDWNSHKTLDAISSMD 1714
              GG +T+ LQKTFPPDWN+H +L+A    D
Sbjct: 875  RIGGELTQTLQKTFPPDWNTHHSLEANHESD 905



 Score =  154 bits (389), Expect = 9e-35
 Identities = 97/442 (21%), Positives = 208/442 (47%), Gaps = 16/442 (3%)
 Frame = +2

Query: 266  RDMEEEGIDASIDIYHTMMDGYTMISNEEKCIVVFNRLKECGFTPSVISYGCLINLYIKM 445
            R    E  + S   +  ++D  T   N +  +  F R+K+    PS   +G ++  Y + 
Sbjct: 254  RSKWHEEREGSTKAFRKVLD--TQPENWQAVVSAFERIKK----PSRREFGLMVGYYARR 307

Query: 446  DKIYKALEISENMKSAGINHNIKTYSMLINGFIKLKDWANAFAIFEDVICDGLKPDVVLY 625
              +++A +  E+M++ GI+ +   Y+ LI+ +   +D   A +    +  +G++  +V Y
Sbjct: 308  GDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTY 367

Query: 626  NNIIRAFCGMGNLDRALRTIEDMKKERHKPTSQTFMPIIHAFAKVGEIRKAHEVFDLMRM 805
            + ++  F   GN + A    +  K+      +  +  II+A+ +   + +A  +   M  
Sbjct: 368  SIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREMEE 427

Query: 806  SGCIPTVYTYNALILGLVEKHQMEKAVGILDKMLLAGVIPNEHTYTTIMNGYASVGDIGK 985
             G    +  Y+ ++ G       EK + +  ++   G  P+  TY  ++N Y  +G + K
Sbjct: 428  EGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSK 487

Query: 986  AFEYFAKLKNEGLELDVYTYEALLKACCKSGRMQSALAVTKEMNKQGIKRNTYVYNILID 1165
            A E    +K+ G++ ++ TY  L+    K     +A AV +++ K G+K +  +YN +I 
Sbjct: 488  ALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIK 547

Query: 1166 GWARRGDVWEASDLMQQMRQDGVQPDIHTYTSFINACCKAGDMQKATKTIEEMKRFGVKP 1345
             +   G++  A  ++++M+++  +P   T+   I+   +AG+M++A +  + M+R G  P
Sbjct: 548  AFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIP 607

Query: 1346 NLKTYTTLINGWARASLPEKALKCFEDMKLTGLKPDKAVYHCLI---------------- 1477
             + T+  L+ G       EKA++  ++M L G+ PD+  Y  ++                
Sbjct: 608  TVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYF 667

Query: 1478 TSLLSRAIVAEDYTYRGVLQLC 1543
            T + +  +  + +TY  +L+ C
Sbjct: 668  TKMRNEGLQLDVFTYEALLKAC 689


>ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like [Glycine max]
          Length = 932

 Score =  919 bits (2374), Expect = 0.0
 Identities = 435/572 (76%), Positives = 502/572 (87%)
 Frame = +2

Query: 2    LVHAYAVGKDMEEALSCVRKMKSEGIELTLVTYSIIVGGFGKVGDTEAAEFWFQEAKEKH 181
            L+HAYAVG+DMEEAL CVRKMK EGIE+T+VTYSIIVGGF K+G+ +AA+ WF+EAKEK 
Sbjct: 325  LIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKL 384

Query: 182  TTLNAIIYGNIIYAHCQARNMDRAEALVRDMEEEGIDASIDIYHTMMDGYTMISNEEKCI 361
             +LNA+IYG IIYAHCQ  NMDRAEALVR+MEE+GIDA IDIYHTMMDGYTMI NEEKC+
Sbjct: 385  PSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCL 444

Query: 362  VVFNRLKECGFTPSVISYGCLINLYIKMDKIYKALEISENMKSAGINHNIKTYSMLINGF 541
            +VF+RLKECGF PSVISYGCLINLY K+ K+ KALEIS+ MK +GI HN+KTYSMLINGF
Sbjct: 445  IVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGF 504

Query: 542  IKLKDWANAFAIFEDVICDGLKPDVVLYNNIIRAFCGMGNLDRALRTIEDMKKERHKPTS 721
            +KLKDWANAF++FED   DGLKPDVVLYNNII AFCGMGN+DRA+  +  M+KERH+PT+
Sbjct: 505  LKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTT 564

Query: 722  QTFMPIIHAFAKVGEIRKAHEVFDLMRMSGCIPTVYTYNALILGLVEKHQMEKAVGILDK 901
            +TF+PIIH FA+ GE+R+A E+FD+MR SGCIPTV+TYNALILGLVEK QM KAV ILD+
Sbjct: 565  RTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDE 624

Query: 902  MLLAGVIPNEHTYTTIMNGYASVGDIGKAFEYFAKLKNEGLELDVYTYEALLKACCKSGR 1081
            M +AGV PNEHTYTT+M GYAS+GD  KAF+YF  L+NEGLE+DVYTYEALLK+CCKSGR
Sbjct: 625  MNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGR 684

Query: 1082 MQSALAVTKEMNKQGIKRNTYVYNILIDGWARRGDVWEASDLMQQMRQDGVQPDIHTYTS 1261
            MQSALAVTKEM+ + I RNT+VYNILIDGWARRGDVWEA+DLMQQMR++G+ PDIHTYTS
Sbjct: 685  MQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTS 744

Query: 1262 FINACCKAGDMQKATKTIEEMKRFGVKPNLKTYTTLINGWARASLPEKALKCFEDMKLTG 1441
            FINACCKAGDMQKAT+ I+EM+  G+KPNLKTYTTLINGWARAS+PEKAL CFE+MKL G
Sbjct: 745  FINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAG 804

Query: 1442 LKPDKAVYHCLITSLLSRAIVAEDYTYRGVLQLCEEVKESGITVDMGTAVHWSRCLRKIE 1621
             KPDKAVYHCL+TSLLSRA  A+ Y Y G+L +C E+ ES + VDMGTAVHWSRCLRKIE
Sbjct: 805  FKPDKAVYHCLVTSLLSRATFAQSYVYSGLLSVCREMIESEMIVDMGTAVHWSRCLRKIE 864

Query: 1622 STGGAVTEALQKTFPPDWNSHKTLDAISSMDT 1717
             TGG +TEALQKTFPPDW SH  LD  S  +T
Sbjct: 865  RTGGELTEALQKTFPPDWTSHNVLDVNSETET 896



 Score =  173 bits (438), Expect = 2e-40
 Identities = 122/462 (26%), Positives = 206/462 (44%), Gaps = 46/462 (9%)
 Frame = +2

Query: 236  RNMDRAEALVRDMEEEGIDASI--DIYHTMMDGY---------TMISNEEKCIVVFNRLK 382
            R  +R+E   R ++  G D       +H   DG          T   N +  +  F R+K
Sbjct: 221  RMRERSEEKARWLQGNGGDKGEYPSTWHEERDGSRKSFQKILETQPENWQAVVTAFERIK 280

Query: 383  ECGFTPSVISYGCLINLYIKMDKIYKALEISENMKSAGINHNIKTYSMLINGFIKLKDWA 562
            +    P+   YG ++  Y +   ++ A +  E+M++ GI  +   YS LI+ +   +D  
Sbjct: 281  K----PARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDME 336

Query: 563  NAFAIFEDVICDGLKPDVVLYNNIIRAFCGMGNLDRALRTIEDMKKERHKPTSQTFMPII 742
             A      +  +G++  +V Y+ I+  F  MGN D A    E+ K++     +  +  II
Sbjct: 337  EALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGII 396

Query: 743  HA-----------------------------------FAKVGEIRKAHEVFDLMRMSGCI 817
            +A                                   +  +G   K   VFD ++  G  
Sbjct: 397  YAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFF 456

Query: 818  PTVYTYNALILGLVEKHQMEKAVGILDKMLLAGVIPNEHTYTTIMNGYASVGDIGKAFEY 997
            P+V +Y  LI    +  ++ KA+ I   M ++G+  N  TY+ ++NG+  + D   AF  
Sbjct: 457  PSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSV 516

Query: 998  FAKLKNEGLELDVYTYEALLKACCKSGRMQSALAVTKEMNKQGIKRNTYVYNILIDGWAR 1177
            F     +GL+ DV  Y  ++ A C  G M  A+ + ++M K+  +  T  +  +I G+AR
Sbjct: 517  FEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFAR 576

Query: 1178 RGDVWEASDLMQQMRQDGVQPDIHTYTSFINACCKAGDMQKATKTIEEMKRFGVKPNLKT 1357
             G++  A ++   MR+ G  P +HTY + I    +   M KA   ++EM   GV PN  T
Sbjct: 577  AGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHT 636

Query: 1358 YTTLINGWARASLPEKALKCFEDMKLTGLKPDKAVYHCLITS 1483
            YTTL+ G+A     EKA + F  ++  GL+ D   Y  L+ S
Sbjct: 637  YTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKS 678


>ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545122|gb|EEF46633.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 924

 Score =  918 bits (2372), Expect = 0.0
 Identities = 432/566 (76%), Positives = 509/566 (89%)
 Frame = +2

Query: 2    LVHAYAVGKDMEEALSCVRKMKSEGIELTLVTYSIIVGGFGKVGDTEAAEFWFQEAKEKH 181
            L+HAYAVG+DMEEALSC RKMK EG+E++LVTYSIIVGGF K+G+ +AA+ WF+EAK++H
Sbjct: 347  LIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRH 406

Query: 182  TTLNAIIYGNIIYAHCQARNMDRAEALVRDMEEEGIDASIDIYHTMMDGYTMISNEEKCI 361
            + +NAIIYGN+IYA+CQ  NMD+AEALVR+ME EGIDA IDIYHTMMDGYTM+ NEEKC+
Sbjct: 407  SHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCL 466

Query: 362  VVFNRLKECGFTPSVISYGCLINLYIKMDKIYKALEISENMKSAGINHNIKTYSMLINGF 541
             VF RLKECGF PSV+SYGCLINLY K+ KI KALE+S+ M+SAGI HN+KTYSMLINGF
Sbjct: 467  TVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGF 526

Query: 542  IKLKDWANAFAIFEDVICDGLKPDVVLYNNIIRAFCGMGNLDRALRTIEDMKKERHKPTS 721
            +KLKDWANAFAIFEDV+ DGLKPDVVLYNNIIRAFCGMG +DRA+  +++M+KERH+PTS
Sbjct: 527  LKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTS 586

Query: 722  QTFMPIIHAFAKVGEIRKAHEVFDLMRMSGCIPTVYTYNALILGLVEKHQMEKAVGILDK 901
            +TFMPIIH FA+ GE+++A +VFD+MR SGCIPTV+T+NALILGLVEK QMEKA+ ILD+
Sbjct: 587  RTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDE 646

Query: 902  MLLAGVIPNEHTYTTIMNGYASVGDIGKAFEYFAKLKNEGLELDVYTYEALLKACCKSGR 1081
            M LAGV PNEHTYTTIM+GYA++GD GKAFEYF KL++EGL+LDVYTYEALLKACCKSGR
Sbjct: 647  MALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGR 706

Query: 1082 MQSALAVTKEMNKQGIKRNTYVYNILIDGWARRGDVWEASDLMQQMRQDGVQPDIHTYTS 1261
            MQSALAVTKEM+ Q I RNT+VYNILIDGWARRGDVWEA+DLMQQM+Q GV+PDIHTYTS
Sbjct: 707  MQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTS 766

Query: 1262 FINACCKAGDMQKATKTIEEMKRFGVKPNLKTYTTLINGWARASLPEKALKCFEDMKLTG 1441
            FINACCKAGDM +A+K +EEM+  GVKPN+KTYTTLI+GWARASLPEKAL+CF++MKL G
Sbjct: 767  FINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAG 826

Query: 1442 LKPDKAVYHCLITSLLSRAIVAEDYTYRGVLQLCEEVKESGITVDMGTAVHWSRCLRKIE 1621
            LKPDKAVYHCL+T+LLSRA V E Y   G+L +C+E+ ESG+ VDMGTAVHWS+ LRKIE
Sbjct: 827  LKPDKAVYHCLMTALLSRATVTEAYVRPGILSICKEMIESGLIVDMGTAVHWSKSLRKIE 886

Query: 1622 STGGAVTEALQKTFPPDWNSHKTLDA 1699
             TGG +TEALQKTFPPDWN   ++DA
Sbjct: 887  RTGGELTEALQKTFPPDWNMRHSVDA 912



 Score =  160 bits (406), Expect = 9e-37
 Identities = 107/417 (25%), Positives = 194/417 (46%), Gaps = 35/417 (8%)
 Frame = +2

Query: 332  TMISNEEKCIVVFNRLKECGFTPSVISYGCLINLYIKMDKIYKALEISENMKSAGINHNI 511
            T   N +  +  F R+K+    PS   YG +++ Y +   +++A +  E+M++ GI    
Sbjct: 286  TQPENWQDVVSAFERIKK----PSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTS 341

Query: 512  KTYSMLINGFIKLKDWANAFAIFEDVICDGLKPDVVLYNNIIRAFCGMGNLDRALRTIED 691
              Y+ LI+ +   +D   A +    +  +G++  +V Y+ I+  F  +GN D A R  ++
Sbjct: 342  HVYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKE 401

Query: 692  MKKERHKPTSQTFMPIIHAFAKVGEIRKAHEVFDLMRMSGCIPTVYTYNALILGLVEKHQ 871
             K       +  +  +I+A+ +   + +A  +   M   G    +  Y+ ++ G      
Sbjct: 402  AKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGN 461

Query: 872  MEKAVGILDKMLLAGVIPNEHTYTTIMNGYASVGDIGKAFEY------------------ 997
             EK + + +++   G  P+  +Y  ++N YA VG I KA E                   
Sbjct: 462  EEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSM 521

Query: 998  ----FAKLKN-------------EGLELDVYTYEALLKACCKSGRMQSALAVTKEMNKQG 1126
                F KLK+             +GL+ DV  Y  +++A C  G M  A+ + KEM K+ 
Sbjct: 522  LINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKER 581

Query: 1127 IKRNTYVYNILIDGWARRGDVWEASDLMQQMRQDGVQPDIHTYTSFINACCKAGDMQKAT 1306
             +  +  +  +I G+AR G++  A D+   MR+ G  P +HT+ + I    +   M+KA 
Sbjct: 582  HRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAI 641

Query: 1307 KTIEEMKRFGVKPNLKTYTTLINGWARASLPEKALKCFEDMKLTGLKPDKAVYHCLI 1477
            + ++EM   GV PN  TYTT+++G+A      KA + F  ++  GL+ D   Y  L+
Sbjct: 642  EILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALL 698