BLASTX nr result

ID: Lithospermum22_contig00015761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00015761
         (1215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604154.1| Ycf68 protein [Medicago truncatula] gi|35550...   157   6e-39
ref|XP_003599576.1| Ycf68 protein [Medicago truncatula] gi|35548...   157   6e-39
ref|XP_003588932.1| hypothetical protein MTR_1g015430 [Medicago ...    97   2e-35
ref|XP_002338214.1| predicted protein [Populus trichocarpa] gi|2...   126   5e-31
ref|YP_398917.1| hypothetical protein NitoCp121 [Nicotiana tomen...   138   3e-30

>ref|XP_003604154.1| Ycf68 protein [Medicago truncatula] gi|355505209|gb|AES86351.1| Ycf68
            protein [Medicago truncatula]
          Length = 237

 Score =  157 bits (398), Expect(2) = 6e-39
 Identities = 82/107 (76%), Positives = 84/107 (78%)
 Frame = -2

Query: 1133 RALSHMDSSMCSSAPDPEMWIIQGTLAWRIPPARTGV*NQTSPQEDRWGDSGEIQCRSNF 954
            RALSH+DSSMCSSAPDPEMWIIQGTL                  EDRWGDSGEIQCRSNF
Sbjct: 119  RALSHIDSSMCSSAPDPEMWIIQGTL------------------EDRWGDSGEIQCRSNF 160

Query: 953  RFTRGIRAVRGGPSRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK 813
             FTRGIRAV+GGPS LLSSRE IHPLSVYGQLSLEHRFRFGLN K K
Sbjct: 161  LFTRGIRAVQGGPSWLLSSREFIHPLSVYGQLSLEHRFRFGLNRKRK 207



 Score = 30.8 bits (68), Expect(2) = 6e-39
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -1

Query: 768 SPLSFWGDGGIV 733
           SPLSFWGDGGIV
Sbjct: 223 SPLSFWGDGGIV 234


>ref|XP_003599576.1| Ycf68 protein [Medicago truncatula] gi|355488624|gb|AES69827.1| Ycf68
            protein [Medicago truncatula]
          Length = 237

 Score =  157 bits (398), Expect(2) = 6e-39
 Identities = 82/107 (76%), Positives = 84/107 (78%)
 Frame = -2

Query: 1133 RALSHMDSSMCSSAPDPEMWIIQGTLAWRIPPARTGV*NQTSPQEDRWGDSGEIQCRSNF 954
            RALSH+DSSMCSSAPDPEMWIIQGTL                  EDRWGDSGEIQCRSNF
Sbjct: 119  RALSHIDSSMCSSAPDPEMWIIQGTL------------------EDRWGDSGEIQCRSNF 160

Query: 953  RFTRGIRAVRGGPSRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK 813
             FTRGIRAV+GGPS LLSSRE IHPLSVYGQLSLEHRFRFGLN K K
Sbjct: 161  LFTRGIRAVQGGPSWLLSSREFIHPLSVYGQLSLEHRFRFGLNRKRK 207



 Score = 30.8 bits (68), Expect(2) = 6e-39
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -1

Query: 768 SPLSFWGDGGIV 733
           SPLSFWGDGGIV
Sbjct: 223 SPLSFWGDGGIV 234


>ref|XP_003588932.1| hypothetical protein MTR_1g015430 [Medicago truncatula]
           gi|355477980|gb|AES59183.1| hypothetical protein
           MTR_1g015430 [Medicago truncatula]
          Length = 219

 Score = 96.7 bits (239), Expect(2) = 2e-35
 Identities = 41/48 (85%), Positives = 46/48 (95%)
 Frame = +3

Query: 201 LAREVNHRTYGPTNWERINRFLFGSDSSFPNAAYNSPLYCALQVCLFP 344
           LAR+VNHRTYGP+NW+RIN+FLFGSDSSFPNA YN PLYC+LQVCLFP
Sbjct: 126 LARKVNHRTYGPSNWKRINKFLFGSDSSFPNATYNYPLYCSLQVCLFP 173



 Score = 80.5 bits (197), Expect(2) = 2e-35
 Identities = 37/40 (92%), Positives = 38/40 (95%)
 Frame = +1

Query: 1   VQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPSQV 120
           VQVQDTIIT WT+RHPT NRNDPIARAELYQLSYIPPSQV
Sbjct: 83  VQVQDTIITTWTVRHPTCNRNDPIARAELYQLSYIPPSQV 122


>ref|XP_002338214.1| predicted protein [Populus trichocarpa] gi|222871287|gb|EEF08418.1|
           predicted protein [Populus trichocarpa]
          Length = 81

 Score =  126 bits (317), Expect(2) = 5e-31
 Identities = 64/70 (91%), Positives = 67/70 (95%)
 Frame = -1

Query: 465 GAGLKKDLRVSRVGPGGSLNAFFFLLIGVISQRLAGVRKKGGTSTLGERSTTESCMLRSG 286
           G+ LKKDLRVS+VGPGGSLNAFFFLLIGVIS+RLA VRKKGGTSTLGERST ESCMLRSG
Sbjct: 12  GSRLKKDLRVSKVGPGGSLNAFFFLLIGVISKRLAMVRKKGGTSTLGERSTPESCMLRSG 71

Query: 285 RMNRSRKGIY 256
           RMNRSRKGIY
Sbjct: 72  RMNRSRKGIY 81



 Score = 35.4 bits (80), Expect(2) = 5e-31
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -3

Query: 499 MCLFIYLLTRNGSRFEK 449
           MCLFIYLLTRNGSR +K
Sbjct: 1   MCLFIYLLTRNGSRLKK 17


>ref|YP_398917.1| hypothetical protein NitoCp121 [Nicotiana tomentosiformis]
           gi|81301638|ref|YP_398933.1| hypothetical protein
           NitoCp122 [Nicotiana tomentosiformis]
           gi|351653934|ref|YP_004891660.1| unnamed protein product
           (chloroplast) [Nicotiana undulata]
           gi|351653949|ref|YP_004891676.1| unnamed protein product
           (chloroplast) [Nicotiana undulata]
           gi|76559646|emb|CAJ32484.1| hypothetical protein
           [Nicotiana tabacum] gi|76559648|emb|CAJ32486.1|
           hypothetical protein [Nicotiana tabacum]
           gi|77799619|dbj|BAE46708.1| hypothetical protein
           [Nicotiana sylvestris] gi|77799635|dbj|BAE46724.1|
           hypothetical protein [Nicotiana sylvestris]
           gi|80750981|dbj|BAE48057.1| hypothetical protein
           [Nicotiana tomentosiformis] gi|80750997|dbj|BAE48073.1|
           hypothetical protein [Nicotiana tomentosiformis]
           gi|347453960|gb|AEO95618.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347453975|gb|AEO95633.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347454070|gb|AEO95727.1| hypothetical protein
           [synthetic construct] gi|347454085|gb|AEO95742.1|
           hypothetical protein [synthetic construct]
          Length = 71

 Score =  138 bits (347), Expect = 3e-30
 Identities = 70/71 (98%), Positives = 70/71 (98%)
 Frame = -1

Query: 468 MGAGLKKDLRVSRVGPGGSLNAFFFLLIGVISQRLAGVRKKGGTSTLGERSTTESCMLRS 289
           MGAGLKKDLRVSRVGPGGSLNAFFFLLIGVISQRLA VRKKGGTSTLGERSTTESCMLRS
Sbjct: 1   MGAGLKKDLRVSRVGPGGSLNAFFFLLIGVISQRLARVRKKGGTSTLGERSTTESCMLRS 60

Query: 288 GRMNRSRKGIY 256
           GRMNRSRKGIY
Sbjct: 61  GRMNRSRKGIY 71


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