BLASTX nr result

ID: Lithospermum22_contig00015682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00015682
         (1028 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-a...   178   2e-42
ref|XP_002332199.1| predicted protein [Populus trichocarpa] gi|2...   177   5e-42
ref|XP_002529898.1| small nuclear ribonucleoprotein-associated p...   176   8e-42
ref|XP_002529896.1| small nuclear ribonucleoprotein-associated p...   176   8e-42
ref|NP_001175068.1| Os07g0166600 [Oryza sativa Japonica Group] g...   176   8e-42

>ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'
           [Vitis vinifera] gi|147774905|emb|CAN61706.1|
           hypothetical protein VITISV_001610 [Vitis vinifera]
          Length = 276

 Score =  178 bits (451), Expect = 2e-42
 Identities = 91/146 (62%), Positives = 103/146 (70%), Gaps = 3/146 (2%)
 Frame = -3

Query: 816 QFINYRMRVHIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGTK-EDREDXXXXXX 640
           Q+INYRMRV IQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K E+RE+      
Sbjct: 11  QYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNEEREERRTLGL 70

Query: 639 XXXXXXXXVSMTVEGPPPPDDSRVKATSVS--XXXXXXXXXXXXXXXXXAVQAQPGLAGP 466
                   +SMTVEGPPPP++SR KA   +                    +QAQPGLAGP
Sbjct: 71  VLLRGEEVISMTVEGPPPPEESRAKAVGAAAMAGPGIGRAAGRGIPTAPLIQAQPGLAGP 130

Query: 465 VRGIGGPSPGMMQPQISRPPVPNVSA 388
           VRG+GGP+PGMMQPQISRPPVP +SA
Sbjct: 131 VRGVGGPAPGMMQPQISRPPVPQLSA 156


>ref|XP_002332199.1| predicted protein [Populus trichocarpa] gi|222875306|gb|EEF12437.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  177 bits (448), Expect = 5e-42
 Identities = 92/147 (62%), Positives = 101/147 (68%), Gaps = 4/147 (2%)
 Frame = -3

Query: 816 QFINYRMRVHIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGTK--EDREDXXXXX 643
           Q+INYRMRV IQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K  E+RED     
Sbjct: 11  QYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNNEEREDRRTLG 70

Query: 642 XXXXXXXXXVSMTVEGPPPPDDSRVKATS--VSXXXXXXXXXXXXXXXXXAVQAQPGLAG 469
                    +SMTVEGPPPP++SR KA S   +                  +QAQPGLAG
Sbjct: 71  LVLLRGEEVISMTVEGPPPPEESRAKAVSAAAASGPGLGRAAGRGIPTAPLIQAQPGLAG 130

Query: 468 PVRGIGGPSPGMMQPQISRPPVPNVSA 388
           PVRG+GGPSPGMMQPQ  RPPVP  SA
Sbjct: 131 PVRGVGGPSPGMMQPQFMRPPVPQHSA 157


>ref|XP_002529898.1| small nuclear ribonucleoprotein-associated protein, putative
           [Ricinus communis] gi|223530625|gb|EEF32501.1| small
           nuclear ribonucleoprotein-associated protein, putative
           [Ricinus communis]
          Length = 275

 Score =  176 bits (446), Expect = 8e-42
 Identities = 92/147 (62%), Positives = 102/147 (69%), Gaps = 4/147 (2%)
 Frame = -3

Query: 816 QFINYRMRVHIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGTK--EDREDXXXXX 643
           Q INYRMRV IQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K  E+RED     
Sbjct: 11  QHINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNNEEREDRRTLG 70

Query: 642 XXXXXXXXXVSMTVEGPPPPDDSRVKATSVS--XXXXXXXXXXXXXXXXXAVQAQPGLAG 469
                    +SMTVEGPPP ++SR KA S +                    +QAQPGLAG
Sbjct: 71  LVLLRGEEVISMTVEGPPPQEESRAKAVSATAVAGPGIGRAAGRGIPTAPLIQAQPGLAG 130

Query: 468 PVRGIGGPSPGMMQPQISRPPVPNVSA 388
           PVRG+GGP+PGMMQPQISRPPVP +SA
Sbjct: 131 PVRGVGGPAPGMMQPQISRPPVPQLSA 157


>ref|XP_002529896.1| small nuclear ribonucleoprotein-associated protein, putative
           [Ricinus communis] gi|223530623|gb|EEF32499.1| small
           nuclear ribonucleoprotein-associated protein, putative
           [Ricinus communis]
          Length = 275

 Score =  176 bits (446), Expect = 8e-42
 Identities = 92/147 (62%), Positives = 102/147 (69%), Gaps = 4/147 (2%)
 Frame = -3

Query: 816 QFINYRMRVHIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGTK--EDREDXXXXX 643
           Q INYRMRV IQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K  E+RED     
Sbjct: 11  QHINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNNEEREDRRTLG 70

Query: 642 XXXXXXXXXVSMTVEGPPPPDDSRVKATSVS--XXXXXXXXXXXXXXXXXAVQAQPGLAG 469
                    +SMTVEGPPP ++SR KA S +                    +QAQPGLAG
Sbjct: 71  LVLLRGEEVISMTVEGPPPQEESRAKAVSATAVAGPGIGRAAGRGIPTAPLIQAQPGLAG 130

Query: 468 PVRGIGGPSPGMMQPQISRPPVPNVSA 388
           PVRG+GGP+PGMMQPQISRPPVP +SA
Sbjct: 131 PVRGVGGPAPGMMQPQISRPPVPQLSA 157


>ref|NP_001175068.1| Os07g0166600 [Oryza sativa Japonica Group]
           gi|255677541|dbj|BAH93796.1| Os07g0166600 [Oryza sativa
           Japonica Group]
          Length = 261

 Score =  176 bits (446), Expect = 8e-42
 Identities = 91/148 (61%), Positives = 104/148 (70%), Gaps = 5/148 (3%)
 Frame = -3

Query: 816 QFINYRMRVHIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGTKE--DREDXXXXX 643
           QF+NYRMRV IQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP+K +K   +RE+     
Sbjct: 11  QFVNYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPSKSSKTTGEREERRTLG 70

Query: 642 XXXXXXXXXVSMTVEGPPPPDDSRVKAT---SVSXXXXXXXXXXXXXXXXXAVQAQPGLA 472
                    VSMTVEGPPPPD+SR KA    +                    +QAQPGLA
Sbjct: 71  LLLLRGEEVVSMTVEGPPPPDESRAKAAGAGAAMAGPGVGRAAGRGVPAGQMLQAQPGLA 130

Query: 471 GPVRGIGGPSPGMMQPQISRPPVPNVSA 388
           GPVRG+GGP+PGMMQPQISRPP+PN+SA
Sbjct: 131 GPVRGVGGPAPGMMQPQISRPPMPNLSA 158


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