BLASTX nr result

ID: Lithospermum22_contig00015644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00015644
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904...   127   1e-27
ref|XP_003623963.1| Mediator of RNA polymerase II transcription ...   125   4e-27
ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263...   121   7e-26
ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806...   117   7e-25

>ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|222844313|gb|EEE81860.1|
           predicted protein [Populus trichocarpa]
          Length = 2219

 Score =  134 bits (336), Expect = 1e-29
 Identities = 70/112 (62%), Positives = 87/112 (77%), Gaps = 2/112 (1%)
 Frame = -3

Query: 337 EPSPGGSDLVDNSRRAYTISALVEMLRYLILSVPDTFVALDCVHLPSSIVTPGVNEGNFM 158
           EPSPGGSDLVDNSRRAYT SAL+EMLRYLIL+VPDTFVALDC  LP S+V+  VN+G F+
Sbjct: 333 EPSPGGSDLVDNSRRAYTTSALIEMLRYLILAVPDTFVALDCFPLPPSVVSYAVNDGTFL 392

Query: 157 EKVGESAR--INGSLGVAHVLRDKGIESLTEGVSIDQVVSSIKKCSENLARA 8
            K  E AR   + S  VA V R KG+++  + +S D+VVSSI+K ++NLA+A
Sbjct: 393 SKASEDARKTKDNSAEVACVFRSKGLDAQYQSLSFDRVVSSIQKRADNLAKA 444


>ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP,
           putative [Ricinus communis]
          Length = 2264

 Score =  127 bits (318), Expect = 1e-27
 Identities = 66/112 (58%), Positives = 84/112 (75%), Gaps = 2/112 (1%)
 Frame = -3

Query: 337 EPSPGGSDLVDNSRRAYTISALVEMLRYLILSVPDTFVALDCVHLPSSIVTPGVNEGNFM 158
           EPSPGGSDLVDNSRRAYT SAL+EMLRYLIL+VPDTFVA+DC  LP S+++  VN+G F+
Sbjct: 384 EPSPGGSDLVDNSRRAYTTSALIEMLRYLILAVPDTFVAVDCFPLPPSVMSYAVNDGVFV 443

Query: 157 EKVGESAR--INGSLGVAHVLRDKGIESLTEGVSIDQVVSSIKKCSENLARA 8
            +  E AR   + S GV  V R KG+++  +  S +QVV SI+K  +NLA+A
Sbjct: 444 SRASEEARKTKDNSAGVVGVFRSKGLDAQYQSFSFNQVVLSIQKREDNLAKA 495


>ref|XP_003623963.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|87240976|gb|ABD32834.1| 2-oxo acid
           dehydrogenase, lipoyl-binding site [Medicago truncatula]
           gi|355498978|gb|AES80181.1| Mediator of RNA polymerase
           II transcription subunit [Medicago truncatula]
          Length = 2270

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/111 (56%), Positives = 85/111 (76%), Gaps = 1/111 (0%)
 Frame = -3

Query: 337 EPSPGGSDLVDNSRRAYTISALVEMLRYLILSVPDTFVALDCVHLPSSIVTPGVNEGNFM 158
           +P+PGGSDLVDNSRRAYT +AL+EMLRYLIL+VP+TFVALDC  LPSS+V+  +N+GNF 
Sbjct: 396 DPAPGGSDLVDNSRRAYTTAALIEMLRYLILAVPETFVALDCFPLPSSVVSLAINDGNFA 455

Query: 157 EKVGESA-RINGSLGVAHVLRDKGIESLTEGVSIDQVVSSIKKCSENLARA 8
            K  E+A +I  S     + R KG++   E ++ D+V+SSI+K +ENL +A
Sbjct: 456 PKAIEAADKIKSSSADVCIFRSKGLDVRYESLAFDRVISSIQKHAENLTKA 506


>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
          Length = 2272

 Score =  121 bits (303), Expect = 7e-26
 Identities = 67/112 (59%), Positives = 84/112 (75%), Gaps = 2/112 (1%)
 Frame = -3

Query: 337 EPSPGGSDLVDNSRRAYTISALVEMLRYLILSVPDTFVALDCVHLPSSIVTPGVNEGNFM 158
           EPSPGGSDLVDNSRRAYT SALVEMLR+LIL+VPDTFVALDC  LP  +V+   N+G+F+
Sbjct: 382 EPSPGGSDLVDNSRRAYTSSALVEMLRFLILAVPDTFVALDCFPLPPCVVSHVANDGSFL 441

Query: 157 EKVGE-SARI-NGSLGVAHVLRDKGIESLTEGVSIDQVVSSIKKCSENLARA 8
            KV E + +I N    V  VLRDK ++     +S D +VSSI+K ++NLA+A
Sbjct: 442 TKVSEDTIKIKNRPAEVPTVLRDKVLDGQYPSLSFDHIVSSIQKRADNLAKA 493


>ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806985 [Glycine max]
          Length = 2279

 Score =  117 bits (294), Expect = 7e-25
 Identities = 59/112 (52%), Positives = 82/112 (73%), Gaps = 2/112 (1%)
 Frame = -3

Query: 337 EPSPGGSDLVDNSRRAYTISALVEMLRYLILSVPDTFVALDCVHLPSSIVTPGVNEGNFM 158
           +P+PGGSDLVDNSRRAYT SAL+EMLRYLI + P+TFVALDC  LPSS+V+  +N+GNF+
Sbjct: 395 DPAPGGSDLVDNSRRAYTTSALIEMLRYLIFAAPETFVALDCFPLPSSVVSHTINDGNFV 454

Query: 157 EKVGESAR--INGSLGVAHVLRDKGIESLTEGVSIDQVVSSIKKCSENLARA 8
            K  E+A    + S  V  + R KG ++  + ++ D V+S I++C E+L +A
Sbjct: 455 LKATEAAGKIKSSSEDVVCLFRSKGFDAQFQSLAFDHVISCIQECVEDLTKA 506


Top