BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00015619
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...   267   1e-69
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   265   4e-69
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa...   263   1e-68
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...   261   5e-68
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g...   260   1e-67

>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score =  267 bits (683), Expect = 1e-69
 Identities = 125/199 (62%), Positives = 162/199 (81%)
 Frame = +3

Query: 3    LVGSLQYLTLTRPDLSYVVNRVCQHMHAPTAEHFGLVKRILRYVKSTIELGLLITPSRNF 182
            +VG+LQYLTLTRPD+S+ VN+VCQ +H+PT +H+  VKRILRYVK +++LGL I+ S + 
Sbjct: 1859 IVGALQYLTLTRPDISFAVNKVCQFLHSPTIDHWMAVKRILRYVKFSVDLGLKISRSSST 1918

Query: 183  TIQAFSDIDWAGSSSDRRSTGGYVVYLGSNIVSWQSKKQRTVARSSTESKYKALANCSAE 362
             + AF D DWAGS  DRRSTGG+ V+LGSN+VSW ++KQ TV+RSSTE++YKA+AN +AE
Sbjct: 1919 LVSAFLDADWAGSIDDRRSTGGFAVFLGSNLVSWSARKQATVSRSSTEAEYKAVANATAE 1978

Query: 363  ISWLVSLLGELHFPPSKPPILWCDNLGATYLYANPVFHARTKHIEIDFHFV*EKVARKQL 542
            + W+ +LL EL     +   +WCDNLGATYL  NPVFHARTKHIEID+HFV E+VARKQL
Sbjct: 1979 VMWVQALLKELGINSPETACMWCDNLGATYLAVNPVFHARTKHIEIDYHFVRERVARKQL 2038

Query: 543  QVQFISTKDQIADVLTKPL 599
            +++FIS+ DQ+AD  TKPL
Sbjct: 2039 EIKFISSGDQVADGFTKPL 2057


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score =  265 bits (678), Expect = 4e-69
 Identities = 125/199 (62%), Positives = 159/199 (79%)
 Frame = +3

Query: 3    LVGSLQYLTLTRPDLSYVVNRVCQHMHAPTAEHFGLVKRILRYVKSTIELGLLITPSRNF 182
            LVG+LQYLTLTRPDLS+ VN+VCQ++HAPT +H+   KRILRY+K T++LGL I+ S + 
Sbjct: 1215 LVGALQYLTLTRPDLSFSVNKVCQYLHAPTTKHWAAAKRILRYLKHTVKLGLKISKSNSL 1274

Query: 183  TIQAFSDIDWAGSSSDRRSTGGYVVYLGSNIVSWQSKKQRTVARSSTESKYKALANCSAE 362
             + AFSD DWAG   DR STGG+ V++G N+VSW ++KQ TV+RSSTE++YKALAN +AE
Sbjct: 1275 LVSAFSDADWAGCLDDRHSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANVTAE 1334

Query: 363  ISWLVSLLGELHFPPSKPPILWCDNLGATYLYANPVFHARTKHIEIDFHFV*EKVARKQL 542
            I W+ +LL EL     K   +WCDN+GA Y+ ANPVFHARTKHIE+D+HFV E+VARK L
Sbjct: 1335 IMWIQTLLHELGIQAPKIAKVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKFL 1394

Query: 543  QVQFISTKDQIADVLTKPL 599
            QV++ISTKDQ+AD  TK L
Sbjct: 1395 QVEYISTKDQVADGFTKTL 1413


>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|31433472|gb|AAP54977.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1031

 Score =  263 bits (673), Expect = 1e-68
 Identities = 125/199 (62%), Positives = 159/199 (79%)
 Frame = +3

Query: 3    LVGSLQYLTLTRPDLSYVVNRVCQHMHAPTAEHFGLVKRILRYVKSTIELGLLITPSRNF 182
            LVG+LQYLTLTRPDLS+ VN+VCQ++HA T +H+   KRILRY+K T++LGL I+ S + 
Sbjct: 815  LVGALQYLTLTRPDLSFSVNKVCQYLHAATTKHWVAAKRILRYLKHTVKLGLKISKSNSL 874

Query: 183  TIQAFSDIDWAGSSSDRRSTGGYVVYLGSNIVSWQSKKQRTVARSSTESKYKALANCSAE 362
             + AFSD DWAG   DRRSTGG+ V++G N+VSW ++KQ TV+RSSTE++YKALAN +AE
Sbjct: 875  LVSAFSDADWAGCLDDRRSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANATAE 934

Query: 363  ISWLVSLLGELHFPPSKPPILWCDNLGATYLYANPVFHARTKHIEIDFHFV*EKVARKQL 542
            I W+ +LL EL     K   +WCDN+GA Y+ ANPVFHARTKHIE+D+HFV E+VARK L
Sbjct: 935  IMWIQTLLHELGIQVPKIAKVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKLL 994

Query: 543  QVQFISTKDQIADVLTKPL 599
            QV++ISTKDQ+AD  TK L
Sbjct: 995  QVEYISTKDQVADGFTKTL 1013


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  261 bits (668), Expect = 5e-68
 Identities = 124/199 (62%), Positives = 154/199 (77%)
 Frame = +3

Query: 3    LVGSLQYLTLTRPDLSYVVNRVCQHMHAPTAEHFGLVKRILRYVKSTIELGLLITPSRNF 182
            +VG+LQYLTLTR DLS++VN+VCQ +H+PT  H+  VKRILRY+K T+E GL    S + 
Sbjct: 719  IVGALQYLTLTRSDLSFLVNKVCQFLHSPTTVHWSAVKRILRYIKGTVEFGLRFGKSDSM 778

Query: 183  TIQAFSDIDWAGSSSDRRSTGGYVVYLGSNIVSWQSKKQRTVARSSTESKYKALANCSAE 362
             I AFSD DWAG S DRRSTGG+ V+LG N++SW ++KQ TV+RSSTE++YKALAN + E
Sbjct: 779  LISAFSDADWAGCSDDRRSTGGFAVFLGPNLISWSARKQATVSRSSTEAEYKALANATTE 838

Query: 363  ISWLVSLLGELHFPPSKPPILWCDNLGATYLYANPVFHARTKHIEIDFHFV*EKVARKQL 542
            ++W+  +L EL         LWCDNLGATYL ANPVFHARTKHIEID+HFV E+VA+K L
Sbjct: 839  VTWVRKILDELRIARPSVAQLWCDNLGATYLSANPVFHARTKHIEIDYHFVREQVAKKLL 898

Query: 543  QVQFISTKDQIADVLTKPL 599
             +QFIST DQ+AD  TK L
Sbjct: 899  DIQFISTTDQLADGFTKSL 917


>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
            gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
            Japonica Group]
          Length = 821

 Score =  260 bits (665), Expect = 1e-67
 Identities = 122/199 (61%), Positives = 155/199 (77%)
 Frame = +3

Query: 3    LVGSLQYLTLTRPDLSYVVNRVCQHMHAPTAEHFGLVKRILRYVKSTIELGLLITPSRNF 182
            +VG+LQYLTLTRPD+S+ +N+VCQ +HAPT  H+  VKRILRYVK T++ GL    + + 
Sbjct: 600  VVGALQYLTLTRPDISFSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSL 659

Query: 183  TIQAFSDIDWAGSSSDRRSTGGYVVYLGSNIVSWQSKKQRTVARSSTESKYKALANCSAE 362
             +  FSD DWAGS  DRRSTGG+ V+LG N+VSW ++KQ TV+RSSTE++YKALAN +AE
Sbjct: 660  LVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSTEAEYKALANATAE 719

Query: 363  ISWLVSLLGELHFPPSKPPILWCDNLGATYLYANPVFHARTKHIEIDFHFV*EKVARKQL 542
            I W+ +LL EL     +   LWCDNLGA YL ANP+FHARTKHIE+DFHFV E+VARK L
Sbjct: 720  IMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLL 779

Query: 543  QVQFISTKDQIADVLTKPL 599
            ++ +ISTKDQ+AD  TK +
Sbjct: 780  EIAYISTKDQVADGFTKAI 798