BLASTX nr result

ID: Lithospermum22_contig00015542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00015542
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33870.3| unnamed protein product [Vitis vinifera]              256   6e-66
ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containin...   249   4e-64
ref|XP_003516789.1| PREDICTED: zinc finger CCCH domain-containin...   233   5e-59
ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containin...   230   3e-58
ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containin...   229   6e-58

>emb|CBI33870.3| unnamed protein product [Vitis vinifera]
          Length = 285

 Score =  256 bits (653), Expect = 6e-66
 Identities = 132/221 (59%), Positives = 153/221 (69%), Gaps = 1/221 (0%)
 Frame = -3

Query: 662 GGGFDNWGPPGFSDQGVWATEDEYRNWN-TGAETPPDSSYYDGRQXXXXXXXXXXXXXXX 486
           GGG DNW  PG SDQ VWATED+Y  WN  G+   P +S Y+GRQ               
Sbjct: 14  GGGVDNW-IPGSSDQLVWATEDDYAVWNGDGSGDTPSNSNYEGRQSQSNVFGRD------ 66

Query: 485 XXXXGDANQLASSRSKAIGKMFYKTKLCGKFRAGVCPYITNCNFAHGLEELRRPPPNWQE 306
                    L S+RSKAIGKMF+KTKLC KFRAG CPY+TNCNFAH ++ELRRPPPNWQE
Sbjct: 67  -------RDLPSNRSKAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHSIQELRRPPPNWQE 119

Query: 305 IVAAHEGERPSSLTAELREEHQIPTIDSPDSRLELQRSNKGRHCKKFYTEEGCPYGESCT 126
           IVAAH+ ER   +++E REE QIP+I S    +E QRS KGRHCKKFYT+EGCPYG++CT
Sbjct: 120 IVAAHDEER--GVSSEPREEFQIPSIGSSSFGVETQRSYKGRHCKKFYTDEGCPYGDNCT 177

Query: 125 FLHDEQSRTRESVAISVTPTVGSGFTNIENGQTLLKPSNWK 3
           FLHDEQS+ RESVAIS+ P  G G +NI       KPSNWK
Sbjct: 178 FLHDEQSKARESVAISLGPGAGGGGSNI-------KPSNWK 211


>ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Vitis vinifera]
          Length = 372

 Score =  249 bits (637), Expect = 4e-64
 Identities = 132/238 (55%), Positives = 155/238 (65%), Gaps = 18/238 (7%)
 Frame = -3

Query: 662 GGGFDNWGPPGFSDQGVWATEDEYRNWN-TGAETPPDSSYYDGRQXXXXXXXXXXXXXXX 486
           GGG DNW  PG SDQ VWATED+Y  WN  G+   P +S Y+GRQ               
Sbjct: 14  GGGVDNW-IPGSSDQLVWATEDDYAVWNGDGSGDTPSNSNYEGRQSQSRSGSEPPNKKSR 72

Query: 485 XXXXGDAN--------QLASSRSKAIGKMFYKTKLCGKFRAGVCPYITNCNFAHGLEELR 330
                D+          L S+RSKAIGKMF+KTKLC KFRAG CPY+TNCNFAH ++ELR
Sbjct: 73  NSQVVDSQGNVFGRDRDLPSNRSKAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHSIQELR 132

Query: 329 RPPPNWQEIVAAHEGERPSSLTAELREEHQIPTIDSPDSRLELQRSNKGRHCKKFYTEEG 150
           RPPPNWQEIVAAH+ ER   +++E REE QIP+I S    +E QRS KGRHCKKFYT+EG
Sbjct: 133 RPPPNWQEIVAAHDEER--GVSSEPREEFQIPSIGSSSFGVETQRSYKGRHCKKFYTDEG 190

Query: 149 CPYGESCTFLHDEQSRTRESVAISVTPTVGSGFTNIENG---------QTLLKPSNWK 3
           CPYG++CTFLHDEQS+ RESVAIS+ P  G G      G          + +KPSNWK
Sbjct: 191 CPYGDNCTFLHDEQSKARESVAISLGPGAGGGGGGGGGGGGGGGGGGSGSNIKPSNWK 248


>ref|XP_003516789.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
           [Glycine max]
          Length = 368

 Score =  233 bits (593), Expect = 5e-59
 Identities = 129/243 (53%), Positives = 148/243 (60%), Gaps = 23/243 (9%)
 Frame = -3

Query: 662 GGGFDNWGPPGFSDQGVWATEDEYRNWNTG-----AETPPDSSYYDGRQXXXXXXXXXXX 498
           GGG ++W      DQ  WATEDEYR WN       +ET P +S Y+GR            
Sbjct: 20  GGGGESWS----GDQADWATEDEYRFWNNNNSGGDSETTPSNSNYEGRSSEPPSKKSRNS 75

Query: 497 XXXXXXXXGDANQLASSRSKAIGKMFYKTKLCGKFRAGVCPYITNCNFAHGLEELRRPPP 318
                         +S+RSKAIGKMF+KTKLC KFRAG CPYITNCNFAH +EELRRPPP
Sbjct: 76  SQEGS---------SSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPP 126

Query: 317 NWQEIVAAHEGERPSSLTAELREEHQIPTIDSPDSRLE-LQRSNKGRHCKKFYTEEGCPY 141
           NWQEIVAAHE E+ + +    REE QIPT+ S     E +QRS KGRHCKKFYTEEGCPY
Sbjct: 127 NWQEIVAAHEEEK-AVMIEPPREEFQIPTVGSTTFSGEMMQRSYKGRHCKKFYTEEGCPY 185

Query: 140 GESCTFLHDEQSRTRESVAISVTP-----------------TVGSGFTNIENGQTLLKPS 12
           G+SCTFLHDEQS+ RESVAIS+ P                 + G+G  N        KPS
Sbjct: 186 GDSCTFLHDEQSKNRESVAISLGPGGYGGGGGGGGGVGGGASGGNGGANAAGNGPNSKPS 245

Query: 11  NWK 3
           NWK
Sbjct: 246 NWK 248


>ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 339

 Score =  230 bits (587), Expect = 3e-58
 Identities = 127/224 (56%), Positives = 147/224 (65%), Gaps = 3/224 (1%)
 Frame = -3

Query: 665 NGGGFDNWGPPGFSDQGVWATEDEYRNWNTGAE---TPPDSSYYDGRQXXXXXXXXXXXX 495
           +G   +NW  PG     VWATEDEYR WN G +     P +S YD RQ            
Sbjct: 13  SGTSNENW--PG----EVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSGSEPPNK 66

Query: 494 XXXXXXXGDANQLASSRSKAIGKMFYKTKLCGKFRAGVCPYITNCNFAHGLEELRRPPPN 315
                     +  +S+RSKAIGKMF+KTKLC KFRAG CPYITNCNFAH +EELRRPP N
Sbjct: 67  KSRS----SQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPHN 122

Query: 314 WQEIVAAHEGERPSSLTAELREEHQIPTIDSPDSRLELQRSNKGRHCKKFYTEEGCPYGE 135
           WQEIVAAHE E+  ++ +E REE QIP++ + +   E QRS KGRHCKKFYTEEGCPYG+
Sbjct: 123 WQEIVAAHEEEK--AVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180

Query: 134 SCTFLHDEQSRTRESVAISVTPTVGSGFTNIENGQTLLKPSNWK 3
           SCTFLHDEQS+ RESVAIS     G G +   NG    KPSNWK
Sbjct: 181 SCTFLHDEQSKNRESVAISFGGGGGGGGSG--NGSN-TKPSNWK 221


>ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 350

 Score =  229 bits (584), Expect = 6e-58
 Identities = 128/233 (54%), Positives = 148/233 (63%), Gaps = 12/233 (5%)
 Frame = -3

Query: 665 NGGGFDNWGPPGFSDQGVWATEDEYRNWNTGAE---TPPDSSYYDGRQXXXXXXXXXXXX 495
           +G   +NW  PG     VWATEDEYR WN G +     P +S YD RQ            
Sbjct: 13  SGTSNENW--PG----EVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSGSEPPNK 66

Query: 494 XXXXXXXGDANQLASSRSKAIGKMFYKTKLCGKFRAGVCPYITNCNFAHGLEELRRPPPN 315
                     +  +S+RSKAIGKMF+KTKLC KFRAG CPYITNCNFAH +EELRRPP N
Sbjct: 67  KSRS----SQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPHN 122

Query: 314 WQEIVAAHEGERPSSLTAELREEHQIPTIDSPDSRLELQRSNKGRHCKKFYTEEGCPYGE 135
           WQEIVAAHE E+  ++ +E REE QIP++ + +   E QRS KGRHCKKFYTEEGCPYG+
Sbjct: 123 WQEIVAAHEEEK--AVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180

Query: 134 SCTFLHDEQSRTRESVAISVTP---------TVGSGFTNIENGQTLLKPSNWK 3
           SCTFLHDEQS+ RESVAIS+ P           G G     NG    KPSNWK
Sbjct: 181 SCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGGSGNGSN-TKPSNWK 232


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