BLASTX nr result

ID: Lithospermum22_contig00015508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00015508
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   1e-09
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   2e-09
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    64   1e-08
ref|XP_004174188.1| PREDICTED: uncharacterized protein LOC101232...    63   2e-08
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    62   5e-08

>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/90 (35%), Positives = 46/90 (51%)
 Frame = +1

Query: 7   GDPLSPYIFXXXXXXXXXXXXXXRIIEEFRFHSRCKEIGLTHLLFADDMFLLCGADCNMF 186
           GDPLSP++F                  EF FH +C+ I LTHL+FADD+ +   AD +  
Sbjct: 647 GDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSI 706

Query: 187 IAVDRVLKDFSRLAGFSPNLNKSKLYFAGV 276
             +      FS+ +G   ++ KS +YF GV
Sbjct: 707 SKIMAAFNSFSKASGLQASIEKSCIYFGGV 736


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 29/90 (32%), Positives = 49/90 (54%)
 Frame = +1

Query: 7   GDPLSPYIFXXXXXXXXXXXXXXRIIEEFRFHSRCKEIGLTHLLFADDMFLLCGADCNMF 186
           GDP+SP++F              +   +F FH +C+ + +THL+FADD+ + C AD +  
Sbjct: 644 GDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSL 703

Query: 187 IAVDRVLKDFSRLAGFSPNLNKSKLYFAGV 276
             ++   + FS  +G + +  KS +YF GV
Sbjct: 704 DHMNVAFQKFSHASGLAASHEKSNIYFCGV 733


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
 Frame = +1

Query: 7   GDPLSPYIFXXXXXXXXXXXXXXRIIEEFRFHSRCKEIGLTHLLFADDMFLLCGADCNMF 186
           G  LSPY+F                  EF +H RCK +GLTHL FADD+ +L        
Sbjct: 380 GCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFADDLMILTDGKIRSV 439

Query: 187 IAVDRVLKDFSRLAGFSPNLNKSKLYFAGVG------LSAQIGIGIDTLLVKY 327
             + +VL  F+   G    + K+ LY AGV       +S++   G+  L V+Y
Sbjct: 440 DGIVKVLNQFAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRY 492


>ref|XP_004174188.1| PREDICTED: uncharacterized protein LOC101232146, partial [Cucumis
           sativus]
          Length = 208

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
 Frame = +1

Query: 85  EEFRFHSRCKEIGLTHLLFADDMFLLCGADCNMFIAVDRVLKDFSRLAGFSPNLNKSKLY 264
           + F+FH  C+++ LTHL F DD+ + C AD +        +K F  L+G   NL KS ++
Sbjct: 13  QNFQFHQFCEKVRLTHLTFVDDLMIFCTADNHSMSFRKETIKRFGELSGLFANLPKSSIF 72

Query: 265 FAGVG------LSAQIGIGIDTLLVKY 327
             GV       L+A +G  I  LLV+Y
Sbjct: 73  LVGVNSSKASPLAANMGFSIGHLLVRY 99


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
 Frame = +1

Query: 7   GDPLSPYIFXXXXXXXXXXXXXXRIIEEFRFHSRCKEIGLTHLLFADDMFLLCGADCNMF 186
           G  LSPY+F                   F +H RCK++GLTHL FADD+ +L        
Sbjct: 41  GCSLSPYLFVVSMNVLSKLLDKATGQRRFGYHPRCKQMGLTHLSFADDLMVLSDGKVRSI 100

Query: 187 IAVDRVLKDFSRLAGFSPNLNKSKLYFAGVG------LSAQIGIGIDTLLVKY 327
             +  V + F++ +G   ++ KS +YFAG+       + A     + TL V+Y
Sbjct: 101 EGIVEVFETFAKCSGLRISMEKSTVYFAGLSHTSPQEVMAHFPFAVGTLPVRY 153


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