BLASTX nr result

ID: Lithospermum22_contig00015491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00015491
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319709.1| predicted protein [Populus trichocarpa] gi|2...   187   1e-45
sp|Q5N8Z0.1|DRB1_ORYSJ RecName: Full=Double-stranded RNA-binding...   171   2e-40
gb|EEE55457.1| hypothetical protein OsJ_03618 [Oryza sativa Japo...   168   9e-40
gb|EEC71555.1| hypothetical protein OsI_03907 [Oryza sativa Indi...   167   2e-39
ref|XP_002525711.1| hypothetical protein RCOM_1321840 [Ricinus c...   145   6e-33

>ref|XP_002319709.1| predicted protein [Populus trichocarpa] gi|222858085|gb|EEE95632.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  187 bits (476), Expect = 1e-45
 Identities = 102/221 (46%), Positives = 139/221 (62%), Gaps = 6/221 (2%)
 Frame = +1

Query: 58  MYKSKLHELCQKRRWNFPAYATERVGGPDHNPRFSSKVTINGVCFETPKNQCRSSKEAQN 237
           MYKSKL ELCQ+R W  P Y + R G   HNPRF + VT+N + F +P +   +SK+AQN
Sbjct: 1   MYKSKLQELCQQRAWELPTYESSRQGQA-HNPRFLATVTVNNISFHSP-SPSNTSKKAQN 58

Query: 238 MAAQLAFDHLINVVPPVKEPNSGSIASELSHTFKIRLQQYAQKHNLSLPVYYNEFEGPPH 417
            AA+LA++H     P    P+     S++   FK +LQ YAQK N +LPVY  E  GPPH
Sbjct: 59  DAAKLAYEHFSISRP---SPSPSPPVSDMQRLFKSQLQTYAQKRNFALPVYSCERVGPPH 115

Query: 418 ARRFRAKVTISGVSYEFSEFFPTLKEAEHQAAKVAFETLSRDDIQE------DEGLYKTF 579
           + RF+ KVT++G ++E  E+F TL +AEH AAK A  +L  + ++E      DE  YK  
Sbjct: 116 SSRFKCKVTVNGQTFESLEYFSTLNKAEHAAAKAALMSLLPNGVEEVSFLFMDESGYKNL 175

Query: 580 LQEFAQKKLFQLPKYSTSQFGVSHHPTFVCTVEIGTDVFQG 702
           LQE AQ++   LP YST++ G +H PTF+ TVEI  ++F G
Sbjct: 176 LQELAQREGCGLPTYSTNKSGEAHVPTFISTVEIEGEIFTG 216


>sp|Q5N8Z0.1|DRB1_ORYSJ RecName: Full=Double-stranded RNA-binding protein 1; AltName:
           Full=dsRNA-binding protein 1 gi|56785214|dbj|BAD82066.1|
           putative dsRNA-binding protein ODB1 [Oryza sativa
           Japonica Group]
          Length = 441

 Score =  171 bits (432), Expect = 2e-40
 Identities = 102/221 (46%), Positives = 129/221 (58%), Gaps = 6/221 (2%)
 Frame = +1

Query: 58  MYKSKLHELCQKRRWNFPAYATERVGGPDHNPRFSSKVTINGVCFETPKNQCRSSKEAQN 237
           MYKS+L ELCQ+RRW  P Y T R  GP H P F + V++NGV F TP++  RS+KEA N
Sbjct: 1   MYKSRLQELCQQRRWAPPEY-THRCAGPAHAPLFGATVSVNGVEFRTPEDAARSAKEAHN 59

Query: 238 MAAQLAFDHLINV-VPPVKEPNSGSIASELSHTFKIRLQQYAQKHNLSLPVYYNEFEGPP 414
           +AA+ AFDHL ++ +PP   P      SE   ++K +LQ YAQK    LP Y    EGP 
Sbjct: 60  IAAKAAFDHLSSLPLPPPPPP------SENQSSYKSQLQIYAQKKGKLLPSYQTIREGPG 113

Query: 415 HARRFRAKVTISGVSYEFSEFFPTLKEAEHQAAKVAF-----ETLSRDDIQEDEGLYKTF 579
           HA RF++ VT+ G ++E  E+F T+KEAE  AAK+A      E  S + +      YK  
Sbjct: 114 HASRFKSVVTVDGKAFESPEYFHTVKEAESAAAKLALMSLPQEASSSEQVPVQPLSYKNL 173

Query: 580 LQEFAQKKLFQLPKYSTSQFGVSHHPTFVCTVEIGTDVFQG 702
           LQE AQK  F LP YST+  G    P F  TV      FQG
Sbjct: 174 LQELAQKHGFSLPVYSTTSDGSVQVPMFKSTVVFQDGSFQG 214


>gb|EEE55457.1| hypothetical protein OsJ_03618 [Oryza sativa Japonica Group]
          Length = 351

 Score =  168 bits (426), Expect = 9e-40
 Identities = 101/221 (45%), Positives = 128/221 (57%), Gaps = 6/221 (2%)
 Frame = +1

Query: 58  MYKSKLHELCQKRRWNFPAYATERVGGPDHNPRFSSKVTINGVCFETPKNQCRSSKEAQN 237
           MYKS+L ELCQ+RRW  P Y T R  GP H P F + V++NGV F TP++  RS+KEA N
Sbjct: 1   MYKSRLQELCQQRRWAPPEY-THRCAGPAHAPLFGATVSVNGVEFRTPEDAARSAKEAHN 59

Query: 238 MAAQLAFDHLINV-VPPVKEPNSGSIASELSHTFKIRLQQYAQKHNLSLPVYYNEFEGPP 414
           +AA+ A DHL ++ +PP   P      SE   ++K +LQ YAQK    LP Y    EGP 
Sbjct: 60  IAAKAALDHLSSLPLPPPPPP------SENQSSYKSQLQIYAQKKGKLLPSYQTIREGPG 113

Query: 415 HARRFRAKVTISGVSYEFSEFFPTLKEAEHQAAKVAF-----ETLSRDDIQEDEGLYKTF 579
           HA RF++ VT+ G ++E  E+F T+KEAE  AAK+A      E  S + +      YK  
Sbjct: 114 HASRFKSVVTVDGKAFESPEYFHTVKEAESAAAKLALMSLPQEASSSEQVPVQPLSYKNL 173

Query: 580 LQEFAQKKLFQLPKYSTSQFGVSHHPTFVCTVEIGTDVFQG 702
           LQE AQK  F LP YST+  G    P F  TV      FQG
Sbjct: 174 LQELAQKHGFSLPVYSTTSDGSVQVPMFKSTVVFQDGSFQG 214


>gb|EEC71555.1| hypothetical protein OsI_03907 [Oryza sativa Indica Group]
          Length = 1030

 Score =  167 bits (422), Expect = 2e-39
 Identities = 101/221 (45%), Positives = 128/221 (57%), Gaps = 6/221 (2%)
 Frame = +1

Query: 58  MYKSKLHELCQKRRWNFPAYATERVGGPDHNPRFSSKVTINGVCFETPKNQCRSSKEAQN 237
           MYKS+L ELCQ+RRW  P Y T R  G  H P F + V++NGV F TP++  RS+KEA N
Sbjct: 1   MYKSRLQELCQQRRWAPPEY-THRCAGLAHAPLFGATVSVNGVEFRTPEDAARSAKEAHN 59

Query: 238 MAAQLAFDHLINV-VPPVKEPNSGSIASELSHTFKIRLQQYAQKHNLSLPVYYNEFEGPP 414
           +AA+ AFDHL ++ +PP   P      SE   ++K +LQ YAQK    LP Y    EGP 
Sbjct: 60  IAAKAAFDHLSSLPLPPPPPP------SENQSSYKSQLQIYAQKKGKLLPSYQTIREGPG 113

Query: 415 HARRFRAKVTISGVSYEFSEFFPTLKEAEHQAAKVAF-----ETLSRDDIQEDEGLYKTF 579
           HA RF++ VT+ G ++E  E+F T+KEAE  AAK+A      E  S + +      YK  
Sbjct: 114 HASRFKSVVTVDGKAFESPEYFHTVKEAESAAAKLALMSLPQEASSSEQVPVQPLSYKNL 173

Query: 580 LQEFAQKKLFQLPKYSTSQFGVSHHPTFVCTVEIGTDVFQG 702
           LQE AQK  F LP YST+  G    P F  TV      FQG
Sbjct: 174 LQELAQKHGFSLPVYSTTSDGSVQVPMFKSTVVFQDGSFQG 214


>ref|XP_002525711.1| hypothetical protein RCOM_1321840 [Ricinus communis]
           gi|223535011|gb|EEF36694.1| hypothetical protein
           RCOM_1321840 [Ricinus communis]
          Length = 162

 Score =  145 bits (367), Expect = 6e-33
 Identities = 81/172 (47%), Positives = 107/172 (62%), Gaps = 1/172 (0%)
 Frame = +1

Query: 58  MYKSKLHELCQKRRWNFPAYATERVGGPDHNPRFSSKVTINGVCFETPKNQCRSSKEAQN 237
           MYK+KL ELC ++ W+ P Y+T +VG  DHNP F + V +NG  F +  +  +SSK AQN
Sbjct: 1   MYKTKLQELCHQKTWSLPEYSTTKVG-QDHNPIFHATVIVNGYSFSS-SSPSKSSKLAQN 58

Query: 238 MAAQLAFDHLINV-VPPVKEPNSGSIASELSHTFKIRLQQYAQKHNLSLPVYYNEFEGPP 414
            AA+LAFDH  +V +PP  +           H +K  LQ YAQK  L LP+Y  E +GPP
Sbjct: 59  NAAKLAFDHFSSVSLPPDVQ----------QHLYKNLLQSYAQKRGLPLPMYSCERQGPP 108

Query: 415 HARRFRAKVTISGVSYEFSEFFPTLKEAEHQAAKVAFETLSRDDIQEDEGLY 570
           HA  F+ KVTI G SYE  +FFPT+ +AEH AAK A  +L+ D  +E   L+
Sbjct: 109 HASLFKCKVTIDGKSYECLDFFPTVSKAEHAAAKAALTSLAPDGAEEASLLF 160



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
 Frame = +1

Query: 334 FKIRLQQYAQKHNLSLPVYYNEFEGPPHARRFRAKVTISGVSYEFSEFFPTLKEAEHQAA 513
           +K +LQ+   +   SLP Y     G  H   F A V ++G S+  S    + K A++ AA
Sbjct: 2   YKTKLQELCHQKTWSLPEYSTTKVGQDHNPIFHATVIVNGYSFSSSSPSKSSKLAQNNAA 61

Query: 514 KVAFETLSRDDIQED--EGLYKTFLQEFAQKKLFQLPKYSTSQFGVSHHPTFVCTVEI 681
           K+AF+  S   +  D  + LYK  LQ +AQK+   LP YS  + G  H   F C V I
Sbjct: 62  KLAFDHFSSVSLPPDVQQHLYKNLLQSYAQKRGLPLPMYSCERQGPPHASLFKCKVTI 119


Top