BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00015488
         (1676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-33
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    90   1e-32
ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein A...    84   1e-28
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                96   2e-28
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali...    92   4e-28

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
            predicted protein [Populus trichocarpa]
          Length = 517

 Score =  100 bits (248), Expect(3) = 2e-33
 Identities = 58/238 (24%), Positives = 110/238 (46%), Gaps = 2/238 (0%)
 Frame = -2

Query: 1195 WLTKSLGGCSVWEDIDAMLRAFL*GKEEVRRYKAKVKWEDVCRPKEQGGLGVKDLVEWNN 1016
            W +  L    V ++++ ++++FL    ++R   AKV W+ VC PK++GGLG+K + EWN 
Sbjct: 112  WASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNK 171

Query: 1015 ANMVSKLWDICSKKD-TIWVK*VNVVRLKGKSIWAYKKNVKDSWVCRCIWGHRGLLYQNV 839
              ++  +W++C+  D +IW   +    L+G++ W  K     SW    I   R L +  +
Sbjct: 172  IALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKM 231

Query: 838  EAVIGDGKSTFIWHDPWMEGRSLIECQDGVKKVLMFNDLHTAADVKMCSNG*EWPTGRRM 659
            + +IGDG +T +W D W     L +     ++ +  + +   A V +     EW T    
Sbjct: 232  KYIIGDGMTTSLWFDNWHPHSPLADSYG--ERFIYDSGMAKNAKVNVLIQNSEWKTPTTQ 289

Query: 658  TGEIQEIRDKVEMLCVDE-AQRHGVVWKAASNEKSVTRRIYNMIKGPFSKKQWAKIAW 488
                  I + +      +  Q+  +VW  + N +   +  +  ++      +W  I W
Sbjct: 290  AIGWHPIIEAIPSNSNPKMGQKDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVW 347



 Score = 62.0 bits (149), Expect(3) = 2e-33
 Identities = 29/77 (37%), Positives = 50/77 (64%)
 Frame = -1

Query: 1400 VKRVIKGFGELARLVPNLDKSNIFVAGGDVSVTERLSRFMNIPIGVLPIKYLGIPLTSKK 1221
            ++ V+  F +L+ L PN +KS+IF++G   +  E++   +    G LP+KYLG+PL S +
Sbjct: 8    IRTVLTKFQDLSGLYPNPNKSDIFLSGVLNAEREQIIHILGFREGELPMKYLGVPLLSSR 67

Query: 1220 MSRVDCKALVDKITGRL 1170
            +  + CK LVD+IT ++
Sbjct: 68   LKAIYCKGLVDRITSKV 84



 Score = 29.3 bits (64), Expect(3) = 2e-33
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = -3

Query: 486 IMWLLVQGKL*TRN---RVAIWKPECELSCLLRGDNESQDHLFFAC 358
           ++W+ VQ KL T++   R  I  P     CL   +NE  +HLFF C
Sbjct: 358 LLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLR--NNEDHNHLFFEC 401


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score = 90.1 bits (222), Expect(4) = 1e-32
 Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 10/233 (4%)
 Frame = -2

Query: 1156 DIDAMLRAFL*GKEEVRRYKAKVKWEDVCRPKEQGGLGVKDLVEWNNANMVSKLWDICSK 977
            +I+ +  A L    E+   KAKV W+++C+PK++GGLG++ L E N  + +  +W + S 
Sbjct: 559  EINRISSALLWSGPELNPKKAKVSWDEICKPKKEGGLGLQSLREANKVSSLKLIWRLLSC 618

Query: 976  KDTIWVK*VNVVRLKGKSIWAY-KKNVKDSWVCRCIWGHRGLLYQNVEAVIGDGKSTFIW 800
            +D++WVK   +  LK +S W+    +   SW+ R +  HR +     +  + +G +T  W
Sbjct: 619  QDSLWVKWTRMNLLKKESFWSIGTHSTLGSWIWRRLLKHREVAKSFCKIEVNNGVNTSFW 678

Query: 799  HDPWMEGRSLIECQDGVKKVLMFNDLH-TAADVKMCSNG*EWPTGRRMTGEIQEIRDKVE 623
             D W E   LI        + M    H T A+         W   RR    ++ + +  E
Sbjct: 679  FDNWSEKGPLINLTGARGAIDMGISRHMTLAEA--------WSRRRRKRHRVEILNEFEE 730

Query: 622  MLCVDEAQRH-----GVVWKAASN---EKSVTRRIYNMIKGPFSKKQWAKIAW 488
            +L      R+      ++W+   +    +  T+  +N I+   +++ W K  W
Sbjct: 731  ILLQKYQHRNIELEDAILWRGKEDVFKARFSTKDTWNHIRTSSNQRAWHKGVW 783



 Score = 48.1 bits (113), Expect(4) = 1e-32
 Identities = 25/89 (28%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
 Frame = -1

Query: 1427 ILIEESLKSVKRVIKGFGELAR---LVPNLDKSNIFVAGGDVSVTERLSRFMNIPIGVLP 1257
            IL +  ++SV  ++K   + A    L   ++K+ +++AG      + +S   +  +G LP
Sbjct: 430  ILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVGKLP 489

Query: 1256 IKYLGIPLTSKKMSRVDCKALVDKITGRL 1170
            ++YLG+PL +K+++  D   L+D+I  R+
Sbjct: 490  VRYLGLPLVTKRLTTSDYSPLIDQIRRRI 518



 Score = 37.7 bits (86), Expect(4) = 1e-32
 Identities = 18/67 (26%), Positives = 38/67 (56%)
 Frame = -1

Query: 245  SMLLKISCAATIYCIWKERNSRLHGKNGRKEAEIIHEIRAVVCDRMCGARTRRAWELAIT 66
            S L + +   +I+ IW+ERNSR HG+  R  + +I +I   + +++  +  ++  +L + 
Sbjct: 877  SFLSRYTFQVSIHSIWRERNSRRHGEKSRSASNLIRQIDKTIRNQL--STIKKKGDLRLE 934

Query: 65   WGLHSAL 45
             GL + +
Sbjct: 935  KGLQTLI 941



 Score = 32.3 bits (72), Expect(4) = 1e-32
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -3

Query: 480 WLLVQGKL*TRNRVAIWKPECELSCLL-RGDNESQDHLFFAC 358
           WL ++ +L T +R+  W      +C+      E++DHLFF C
Sbjct: 796 WLAIRNRLSTGDRMMTWNNGTPTTCVFCSSPMETRDHLFFQC 837


>ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
            sativus]
          Length = 342

 Score = 84.3 bits (207), Expect(3) = 1e-28
 Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 4/230 (1%)
 Frame = -2

Query: 1165 VWEDIDAMLRAFL*GKEEVRRYKAKVKWEDVCRPKEQGGLGVKDLVEWNNANMVSKLWDI 986
            V  D+D +LRA+L   +E  R  AKV W++VC P ++GGL ++D   WN A+ +  LW +
Sbjct: 3    VHRDVDKILRAYLWRGKEEGRSGAKVGWDEVCLPFDEGGLNIRDGSSWNIASTLKILWLL 62

Query: 985  CSKKDTIWVK*VNVVRLKGKSIWAYKKNVKDSWVCRCIWGHRGLLYQNVEAVIGDGKSTF 806
              K  ++WV  V    LKG+S+W     ++                      +G+G+   
Sbjct: 63   LVKSGSLWVSWVESYILKGRSLWEIDAGME----------------------VGNGRKCR 100

Query: 805  IWHDPWMEGRSLIECQDGVKKVLMFNDLHTAADVK----MCSNG*EWPTGRRMTGEIQEI 638
            +W  PW++G  +I+ Q G + +    D  +  DV+    M  NG +W     ++ ++ +I
Sbjct: 101  VWLVPWIQGGPIIQ-QFGERVIY---DAGSRWDVRLVDFMGRNG-DW-RWSLVSLDLMDI 154

Query: 637  RDKVEMLCVDEAQRHGVVWKAASNEKSVTRRIYNMIKGPFSKKQWAKIAW 488
             D+V+ +    +     VW   S +       +  I+   S+  W+ + W
Sbjct: 155  WDRVQGVRPSPSVEDRWVWVPGSRDSFSITSAWETIRPHSSRVGWSGLLW 204



 Score = 50.8 bits (120), Expect(3) = 1e-28
 Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
 Frame = -3

Query: 480 WLLVQGKL*TRNRVAIWKPECELSCLLRGDN-ESQDHLFFACHVQGMYGE-EFCVCWICT 307
           WL ++ +L TR+R++ W     LSCLL G N ES++HLFF   + G +G   FC+C +  
Sbjct: 217 WLAIRDRLSTRDRLSRWDRSIPLSCLLCGGNYESRNHLFFLVILGGRFGRGSFCLCHLL- 275

Query: 306 GEIEDGDG 283
             IE G G
Sbjct: 276 --IESGIG 281



 Score = 40.0 bits (92), Expect(3) = 1e-28
 Identities = 21/47 (44%), Positives = 28/47 (59%)
 Frame = -1

Query: 239 LLKISCAATIYCIWKERNSRLHGKNGRKEAEIIHEIRAVVCDRMCGA 99
           LL++   ATIY IW+ERN RLHG   R+   +   IR+  C + C A
Sbjct: 288 LLRLLWCATIYFIWQERNHRLHGGAVREPMVVFQLIRS--CIKACAA 332


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 95.5 bits (236), Expect(3) = 2e-28
 Identities = 63/233 (27%), Positives = 110/233 (47%), Gaps = 5/233 (2%)
 Frame = -2

Query: 1156 DIDAMLRAFL*GKEEVRRYKAKVKWEDVCRPKEQGGLGVKDLVEWNNANMVSKLWDICSK 977
            +ID +  +FL    E+  +KAK+ W+ VC+PK +GGLG+++L E N+ + +  +W I S 
Sbjct: 485  EIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISN 544

Query: 976  KDTIWVK*VNVVRLKGKSIWAYKKNVK-DSWVCRCIWGHRGLLYQNVEAVIGDGKSTFIW 800
             +++W K V    ++ KSIW+ K++    SW+ R I   R +        +G+G+S   W
Sbjct: 545  SNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGNGESASFW 604

Query: 799  HDPWMEGRSLIECQDGVKKVLMFNDLHTAADVKMCSNG*EWPTGRRMTGEIQEIRDKVEM 620
            +D W     LI+   G K  +   DL    +  +          R  T  + EI + +  
Sbjct: 605  YDHWSAHGRLIDTV-GDKGTI---DLGIPREASVADAWTRRSRRRHRTSLLNEIEEMMAY 660

Query: 619  LCVDEAQRHG-VVWKAASN---EKSVTRRIYNMIKGPFSKKQWAKIAWHHVAS 473
              +  +     V+W+  ++       TR  +++IK   S   W K  W   A+
Sbjct: 661  QRIHHSDAEDTVLWRGKNDVFKPHFSTRDTWHLIKATSSTVSWHKGVWFRHAT 713



 Score = 49.7 bits (117), Expect(3) = 2e-28
 Identities = 23/89 (25%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
 Frame = -1

Query: 1427 ILIEESLKSVKRVIKGFGELAR---LVPNLDKSNIFVAGGDVSVTERLSRFMNIPIGVLP 1257
            +L +   +S++ +++ F E  +   L  +L+KS +++AG    + + ++      +G LP
Sbjct: 356  VLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLP 415

Query: 1256 IKYLGIPLTSKKMSRVDCKALVDKITGRL 1170
            ++YLG+PL +K+++  D   L+++I  R+
Sbjct: 416  VRYLGLPLVTKRLTSADYSPLLEQIKKRI 444



 Score = 29.3 bits (64), Expect(3) = 2e-28
 Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
 Frame = -1

Query: 488  ASCGFLCKGNCKP-GIELLFGNQSVNLAVCCVEIMNRKTIFSLHVMCRECMEKNFVYVGF 312
            A C +L   N  P G  +L  N S +++  CV   N     +L  +   C   + V+   
Sbjct: 717  ALCTWLAIHNRLPTGDRMLKWNSSGSVSGNCVLCTNNSK--TLEHLFFSCSYASTVWAAL 774

Query: 311  VQGK*RMEMGVG-------LDAECED*M*SMLLKISCAATIYCIWKERNSRLHGKNGRKE 153
             +G  +             +    +D +   L +    ATIY +W+ERN R H       
Sbjct: 775  AKGIWKTRYSTRWSHLLTHISTHFQDRVEGFLTRYIFQATIYHVWRERNGRRHDAAPNTP 834

Query: 152  AEII 141
            A +I
Sbjct: 835  ATVI 838


>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
          Length = 504

 Score = 92.4 bits (228), Expect(3) = 4e-28
 Identities = 68/232 (29%), Positives = 102/232 (43%), Gaps = 9/232 (3%)
 Frame = -2

Query: 1156 DIDAMLRAFL*GKEEVRRYKAKVKWEDVCRPKEQGGLGVKDLVEWNNANMVSKLWDICSK 977
            +ID M  A+L    E+   KAK+ W  VC+PKE+GGLG++ L E N+   +  +W I S 
Sbjct: 168  EIDKMCSAYLWSGGELNTSKAKIAWAFVCKPKEEGGLGLRSLKEANDVCCLKLIWRIISH 227

Query: 976  KDTIWVK*VNVVRLKGKSIWAYKKNVK-DSWVCRCIWGHRGLLYQNVEAVIGDGKSTFIW 800
             D++WVK +    LK    WA ++N    SW+ R I   R +     +  I +G  T  W
Sbjct: 228  ADSLWVKWIQSSLLKKVFFWAVRENTSLGSWMWRKILKFRDIARTLCKVEINNGAQTSFW 287

Query: 799  HDPWME-GRSLIECQDGVKKVLMFNDLHTAADVKMCSNG*EWPTGRRMTGEIQEIRDKVE 623
            +D W + GR +    D     L  N   T  +         W   RR       +    E
Sbjct: 288  YDDWSDLGRLIESAGDRGAIDLGINKHATVVEA--------WGNRRRRRHRANFLNRVEE 339

Query: 622  MLCVDEAQRHG----VVWKAASNE-KSV--TRRIYNMIKGPFSKKQWAKIAW 488
             L +    R+      +WK   N  +S+  T+  +N I+   +K  W K  W
Sbjct: 340  RLVLSWNSRNQAEDCALWKGKENRFRSIFSTKDTWNHIRTVSNKVAWYKGVW 391



 Score = 48.5 bits (114), Expect(3) = 4e-28
 Identities = 22/81 (27%), Positives = 46/81 (56%)
 Frame = -1

Query: 1412 SLKSVKRVIKGFGELARLVPNLDKSNIFVAGGDVSVTERLSRFMNIPIGVLPIKYLGIPL 1233
            S++ +  V   F + + L  +++KS +++AG   +  + +    +  +G LP++YLG+PL
Sbjct: 47   SIEGIVDVFDTFAKCSDLKISMEKSTVYLAGLSHTTRQEVIDRFSFAVGTLPVRYLGLPL 106

Query: 1232 TSKKMSRVDCKALVDKITGRL 1170
             +K+ S  D   L+D I  ++
Sbjct: 107  VTKQFSSTDYLPLIDHIKQKI 127



 Score = 32.3 bits (72), Expect(3) = 4e-28
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -3

Query: 483 MWLLVQGKL*TRNRVAIWKPECELSCLLRGDN-ESQDHL 370
           MWL V  +L T +R+ +W    + +C+L  +  ES+DHL
Sbjct: 403 MWLAVHNRLSTGDRMTLWNMGVDATCILCNNALESRDHL 441