BLASTX nr result
ID: Lithospermum22_contig00015485
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00015485
(1177 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 86 2e-18
gb|AAC28197.1| contains similarity to reverse transcriptases [Ar... 88 2e-18
emb|CAN83738.1| hypothetical protein VITISV_014440 [Vitis vinifera] 98 4e-18
emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera] 97 8e-18
emb|CAN66193.1| hypothetical protein VITISV_013311 [Vitis vinifera] 97 1e-17
>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 85.9 bits (211), Expect(3) = 2e-18
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 7/197 (3%)
Frame = -2
Query: 1125 CNA*AKLCKLYKSGSQVMVPCLAFADNVLIFTGASKNSLVKVMQFLDYYQTISGQVINRD 946
C+ KL + ++ +P L FAD+ +IF A++ S K+ Q LD Y +SGQ++N
Sbjct: 674 CHEPGKLIGVPIGRTRTRIPFLTFADDTMIFAKATEASCHKIRQILDKYCLMSGQLVNYH 733
Query: 945 KSVCILS-NKATVARCSIVH*ATGFRKGSLPFTYLGIPFYKRKKTNISL**HDGEG*E*V 769
KS S N + + + G ++ S YLG P + T + + + +
Sbjct: 734 KSAFQCSPNVRDIDKVNFAS-ILGMQESSELGDYLGCPIINSRVTKETFAGVISKTVQQL 792
Query: 768 TSWSSNFLSHGGRITLLQSVLTTLPIYYLQVLKIPEEVLNKLDRTLNKFLWDDLPWCK-- 595
W +N LS GR L+QS L + + +Q +P++VL LD T F W+ P K
Sbjct: 793 PKWKANSLSQAGRTVLIQSNLASKASFQMQSFTLPKKVLTTLDTTYRNFFWNKDPAAKSA 852
Query: 594 ----WSKACAPFEEGGL 556
W+K C P GG+
Sbjct: 853 NFIGWNKICQPKSVGGV 869
Score = 27.7 bits (60), Expect(3) = 2e-18
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 13/61 (21%)
Frame = -1
Query: 481 LWSRFMLEKYCRHSHSSKASIHYSLSKVWKNLVKVRATVTSG-------------WTYSW 341
+W + + +KY + + I + S WKNL++ R + G WT +W
Sbjct: 896 IWVKLVTQKYLKEQNLLVCKIPSNASWQWKNLLRHRNFFSKGLRWLIGDGQDISFWTDNW 955
Query: 340 I 338
I
Sbjct: 956 I 956
Score = 25.8 bits (55), Expect(3) = 2e-18
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 264 WHNQYLRHVLSPEHVLKIENTFF-DTAMEDKILWKLSPDGTF 142
W L ++ P V I + F ++ +D++LW L+P G +
Sbjct: 986 WDIPKLLTLVPPNIVKAISSVFIPSSSQQDRLLWGLTPTGQY 1027
>gb|AAC28197.1| contains similarity to reverse transcriptases [Arabidopsis thaliana]
gi|7267156|emb|CAB77868.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1077
Score = 87.8 bits (216), Expect(2) = 2e-18
Identities = 58/176 (32%), Positives = 84/176 (47%), Gaps = 7/176 (3%)
Frame = -2
Query: 1062 LAFADNVLIFTGASKNSLVKVMQFLDYYQTISGQVINRDKSVCILSNKATVARCSIVH*A 883
L FAD+ + F S +K+ L Y+ SGQ IN+ K S K A V
Sbjct: 614 LLFADDTMFFCRVDPKSCLKLKSILHKYELASGQKINQAKYSITFSAKTPPAVRERVKQI 673
Query: 882 TGFRKGSLPFTYLGIP-FYKRKKTNISL**HDGEG*E*VTSWSSNFLSHGGRITLLQSVL 706
+K YLG+P + RKK ++ D + SWSS FLS G++T+L+SVL
Sbjct: 674 LLIQKEGGQGKYLGLPELFGRKKKDLFTAIVDRIK-QRALSWSSRFLSSAGKLTMLKSVL 732
Query: 705 TTLPIYYLQVLKIPEEVLNKLDRTLNKFLWDDLP------WCKWSKACAPFEEGGL 556
+T+P Y + ++P + ++ TL +F WD P W W K F+ GGL
Sbjct: 733 STMPTYTMSCFQLPLSLCKRIQSTLTRFWWDSKPDQRKMSWISWQKMTLSFKSGGL 788
Score = 31.6 bits (70), Expect(2) = 2e-18
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Frame = -1
Query: 544 FKDIHT---AFMMK-AWFRLREGACLWSRFMLEKYCRHS 440
F+D+ T A + K +W L+ +CL ++ +L KYC+HS
Sbjct: 790 FRDVQTFNKALLAKLSWRLLQNPSCLLAKLLLGKYCKHS 828
>emb|CAN83738.1| hypothetical protein VITISV_014440 [Vitis vinifera]
Length = 666
Score = 98.2 bits (243), Expect = 4e-18
Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 7/190 (3%)
Frame = -2
Query: 1104 CKLY-KSGSQVMVPCLAFADNVLIFTGASKNSLVKVMQFLDYYQTISGQVINRDKSVCIL 928
C+L + G +++V L FAD+ +IF A + + + L +++ SG IN KS I
Sbjct: 305 CRLRGRGGVELIVSHLLFADDTIIFCKAKREQVTNLSWVLAWFEAASGLXINLAKSALIP 364
Query: 927 SNKATVARCSIVH*ATGFRKGSLPFTYLGIPFYKRKKTNISL**HDGEG*E*VTSWSSNF 748
+ V + G R G LP YLG+P KT+ S + + W +
Sbjct: 365 VGQ--VDELEELAAELGCRLGVLPTVYLGLPLGAHHKTSSSWDGVEERMRRRLAQWKRQY 422
Query: 747 LSHGGRITLLQSVLTTLPIYYLQVLKIPEEVLNKLDRTLNKFLWD------DLPWCKWSK 586
+S GGRITL++S L ++PIY+L +++IP+ V ++++ FLW KW
Sbjct: 423 ISKGGRITLIKSTLASIPIYFLSLIRIPKSVTKRIEKIQRDFLWGGGSLERKAHLIKWKV 482
Query: 585 ACAPFEEGGL 556
C+P EEGGL
Sbjct: 483 VCSPKEEGGL 492
>emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]
Length = 2416
Score = 97.1 bits (240), Expect = 8e-18
Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 7/190 (3%)
Frame = -2
Query: 1104 CKLY-KSGSQVMVPCLAFADNVLIFTGASKNSLVKVMQFLDYYQTISGQVINRDKSVCIL 928
C+L + G ++ V L FAD+ +IF A + + + L +++ SG IN KS I
Sbjct: 1350 CRLRGRGGVEMNVSHLLFADDTIIFCKAEREQVTNLSWILAWFEAASGLRINLAKSALIP 1409
Query: 927 SNKATVARCSIVH*ATGFRKGSLPFTYLGIPFYKRKKTNISL**HDGEG*E*VTSWSSNF 748
+ V + G + G+LP YLG+P KT+ S + + W +
Sbjct: 1410 VGQ--VDELEELAAELGCKLGALPTVYLGLPLGAHHKTSSSWDGVEERMRRRLAQWKKQY 1467
Query: 747 LSHGGRITLLQSVLTTLPIYYLQVLKIPEEVLNKLDRTLNKFLWD------DLPWCKWSK 586
+S GGRITL++S L ++PIY+L +++IP+ V ++++ FLW KW
Sbjct: 1468 ISKGGRITLIKSTLASIPIYFLSLIRIPKSVTKRIEKIQKDFLWGGGSLERKAHLIKWKV 1527
Query: 585 ACAPFEEGGL 556
C+P EEGGL
Sbjct: 1528 VCSPKEEGGL 1537
>emb|CAN66193.1| hypothetical protein VITISV_013311 [Vitis vinifera]
Length = 1222
Score = 96.7 bits (239), Expect = 1e-17
Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 7/190 (3%)
Frame = -2
Query: 1104 CKLY-KSGSQVMVPCLAFADNVLIFTGASKNSLVKVMQFLDYYQTISGQVINRDKSVCIL 928
C+L + G +++V L FAD+ +IF A + + + L +++ SG IN KS I
Sbjct: 811 CRLRGRGGVELIVSHLLFADDTIIFCKAKREQVTNLSWVLAWFEAASGLRINLAKSALIP 870
Query: 927 SNKATVARCSIVH*ATGFRKGSLPFTYLGIPFYKRKKTNISL**HDGEG*E*VTSWSSNF 748
+ V + G R G LP YLG+P KT+ S + + W +
Sbjct: 871 VGQ--VDELEELAAELGCRLGVLPTVYLGLPLGAHHKTSSSWDGVEERMRRRLAQWKRQY 928
Query: 747 LSHGGRITLLQSVLTTLPIYYLQVLKIPEEVLNKLDRTLNKFLWD------DLPWCKWSK 586
+S GGRITL++S L +PIY+L +++IP+ V ++++ FLW KW
Sbjct: 929 ISKGGRITLIKSTLAXIPIYFLSLIRIPKSVTKRIEKIQRDFLWGGGSLERKAHLIKWKV 988
Query: 585 ACAPFEEGGL 556
C+P EEGGL
Sbjct: 989 VCSPKEEGGL 998