BLASTX nr result

ID: Lithospermum22_contig00015403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00015403
         (1242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532019.1| PREDICTED: AP-1 complex subunit gamma-2-like...    79   8e-25
gb|AAD28247.1|AF124524_1 gamma-adaptin 1 [Arabidopsis thaliana] ...    76   1e-24
ref|XP_002890600.1| GAMMA-ADAPTIN 1 [Arabidopsis lyrata subsp. l...    76   1e-24
ref|NP_173802.1| AP-1 complex subunit gamma-1 [Arabidopsis thali...    76   2e-24
emb|CAB39730.1| adaptor protein complex AP-1 large subunit [Arab...    76   2e-24

>ref|XP_003532019.1| PREDICTED: AP-1 complex subunit gamma-2-like [Glycine max]
          Length = 881

 Score = 79.0 bits (193), Expect(2) = 8e-25
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = -3

Query: 322 QETLVRVVVWCIGEYGDLLVNNTGVLDIEDPATVSESAAVDVVDI 188
           QETLVRV VWCIGEYGD+L+NN G+LD+EDP TVSES  VDVV+I
Sbjct: 473 QETLVRVAVWCIGEYGDILINNAGMLDVEDPVTVSESDVVDVVEI 517



 Score = 62.4 bits (150), Expect(2) = 8e-25
 Identities = 27/35 (77%), Positives = 33/35 (94%)
 Frame = -2

Query: 434 QAGNYVKDEVWHSLIVVITNALNLHGYSVRSLYKA 330
           +AGN+VKDEVWH+LIVVI+NA  LHGY+VR+LYKA
Sbjct: 432 EAGNFVKDEVWHALIVVISNASELHGYTVRALYKA 466


>gb|AAD28247.1|AF124524_1 gamma-adaptin 1 [Arabidopsis thaliana] gi|3372671|gb|AAC28338.1|
           gamma-adaptin 1 [Arabidopsis thaliana]
          Length = 876

 Score = 75.9 bits (185), Expect(2) = 1e-24
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -3

Query: 322 QETLVRVVVWCIGEYGDLLVNNTGVLDIEDPATVSESAAVDVVD 191
           QETLVRV VWCIGEYGDLLVNN G+L IEDP TV+ES AVDV++
Sbjct: 473 QETLVRVAVWCIGEYGDLLVNNVGMLGIEDPITVTESDAVDVIE 516



 Score = 65.1 bits (157), Expect(2) = 1e-24
 Identities = 29/44 (65%), Positives = 37/44 (84%)
 Frame = -2

Query: 452 LLCYACQAGNYVKDEVWHSLIVVITNALNLHGYSVRSLYKAVPT 321
           +L   C+AG +VKD+VWH+LIVVI+NA  LHGY+VR+LYKAV T
Sbjct: 426 MLKVLCEAGKFVKDDVWHALIVVISNASELHGYTVRALYKAVLT 469


>ref|XP_002890600.1| GAMMA-ADAPTIN 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297336442|gb|EFH66859.1| GAMMA-ADAPTIN 1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 876

 Score = 75.9 bits (185), Expect(2) = 1e-24
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -3

Query: 322 QETLVRVVVWCIGEYGDLLVNNTGVLDIEDPATVSESAAVDVVD 191
           QETLVRV VWCIGEYGDLLVNN G+L IEDP TV+ES AVDV++
Sbjct: 473 QETLVRVAVWCIGEYGDLLVNNVGMLGIEDPITVTESDAVDVIE 516



 Score = 65.1 bits (157), Expect(2) = 1e-24
 Identities = 29/44 (65%), Positives = 37/44 (84%)
 Frame = -2

Query: 452 LLCYACQAGNYVKDEVWHSLIVVITNALNLHGYSVRSLYKAVPT 321
           +L   C+AG +VKD+VWH+LIVVI+NA  LHGY+VR+LYKAV T
Sbjct: 426 MLKVLCEAGKFVKDDVWHALIVVISNASELHGYTVRALYKAVLT 469


>ref|NP_173802.1| AP-1 complex subunit gamma-1 [Arabidopsis thaliana]
           gi|30688616|ref|NP_849701.1| AP-1 complex subunit
           gamma-1 [Arabidopsis thaliana]
           gi|75146766|sp|Q84K16.1|AP1G1_ARATH RecName: Full=AP-1
           complex subunit gamma-1; AltName: Full=Adapter-related
           protein complex 1 subunit gamma-1; AltName: Full=Adaptor
           protein complex AP-1 large subunit gamma-1; AltName:
           Full=Clathrin assembly protein complex 1 gamma-1 large
           chain; Short=At-g-Ad; Short=At-gamma-Ad; AltName:
           Full=Gamma-adaptin 1 gi|28393791|gb|AAO42305.1| putative
           gamma-adaptin [Arabidopsis thaliana]
           gi|28973305|gb|AAO63977.1| putative gamma-adaptin
           [Arabidopsis thaliana] gi|332192327|gb|AEE30448.1| AP-1
           complex subunit gamma-1 [Arabidopsis thaliana]
           gi|332192328|gb|AEE30449.1| AP-1 complex subunit gamma-1
           [Arabidopsis thaliana]
          Length = 876

 Score = 75.9 bits (185), Expect(2) = 2e-24
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -3

Query: 322 QETLVRVVVWCIGEYGDLLVNNTGVLDIEDPATVSESAAVDVVD 191
           QETLVRV VWCIGEYGDLLVNN G+L IEDP TV+ES AVDV++
Sbjct: 473 QETLVRVAVWCIGEYGDLLVNNVGMLGIEDPITVTESDAVDVIE 516



 Score = 63.9 bits (154), Expect(2) = 2e-24
 Identities = 28/44 (63%), Positives = 37/44 (84%)
 Frame = -2

Query: 452 LLCYACQAGNYVKDEVWHSLIVVITNALNLHGYSVRSLYKAVPT 321
           +L   C+AG +VKD+VWH+LIVVI+NA  LHGY+VR+LYK+V T
Sbjct: 426 MLKVLCEAGKFVKDDVWHALIVVISNASELHGYTVRALYKSVLT 469


>emb|CAB39730.1| adaptor protein complex AP-1 large subunit [Arabidopsis thaliana]
          Length = 876

 Score = 75.9 bits (185), Expect(2) = 2e-24
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -3

Query: 322 QETLVRVVVWCIGEYGDLLVNNTGVLDIEDPATVSESAAVDVVD 191
           QETLVRV VWCIGEYGDLLVNN G+L IEDP TV+ES AVDV++
Sbjct: 473 QETLVRVAVWCIGEYGDLLVNNVGMLGIEDPITVTESDAVDVIE 516



 Score = 63.9 bits (154), Expect(2) = 2e-24
 Identities = 28/44 (63%), Positives = 37/44 (84%)
 Frame = -2

Query: 452 LLCYACQAGNYVKDEVWHSLIVVITNALNLHGYSVRSLYKAVPT 321
           +L   C+AG +VKD+VWH+LIVVI+NA  LHGY+VR+LYK+V T
Sbjct: 426 MLKVLCEAGKFVKDDVWHALIVVISNASELHGYTVRALYKSVLT 469


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