BLASTX nr result

ID: Lithospermum22_contig00015319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00015319
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-...    90   2e-16
ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...    89   4e-16
ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...    86   3e-15
ref|XP_004156647.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    83   3e-14
ref|XP_004137939.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    83   3e-14

>ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-like [Vitis vinifera]
          Length = 2048

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 53/146 (36%), Positives = 75/146 (51%), Gaps = 29/146 (19%)
 Frame = +3

Query: 3   VTKYMLHDKGGILRSWMKLLSFVQGMNPLKRQKSIHIEEANTNVSLPFSLSLSIAKINSL 182
           V +Y+ HD+  + R+WMKLL+FVQGMNP KR+  +HIEE N N+  PF L  SIA I+SL
Sbjct: 418 VPEYITHDQRDVPRTWMKLLAFVQGMNPQKRETGLHIEEENENMHYPFVLGHSIANIHSL 477

Query: 183 LVAGAF---------------ANINNFEDQDNVRHWKVXXXXXXXXXXXXXX-------- 293
           LVAGAF               A   + +D++++RH KV                      
Sbjct: 478 LVAGAFSGSKSEETDIEILFNAQKQDLDDEESLRHSKVGRLSRETSVCGTKFNEAKSDCQ 537

Query: 294 ------LVQLTHECMMALEDWFRVEN 353
                 +  L  EC+ ++E+W  V+N
Sbjct: 538 LLIPASVTWLIFECLRSIENWLGVDN 563


>ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2036

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 58/158 (36%), Positives = 76/158 (48%), Gaps = 41/158 (25%)
 Frame = +3

Query: 3   VTKYMLHDKGGILRSWMKLLSFVQGMNPLKRQKSIHIEEANTNVSLPFSLSLSIAKINSL 182
           V KY+ +D+  I R+WM+LLSFVQGM P KR+   HIE+ N NV LPF L  SIA I+SL
Sbjct: 404 VPKYVTNDQQDISRTWMRLLSFVQGMGPQKRETGQHIEDENENVHLPFILGHSIANIHSL 463

Query: 183 LVAGAFANI---------------NNFEDQDNVRHWKV---------------------- 251
           LV GAF++                N+ +D DN+RH KV                      
Sbjct: 464 LVDGAFSDASKGEMDGEIVWSSSKNDSDDGDNLRHAKVGRRSEESSACNVTSRNSALASR 523

Query: 252 ----XXXXXXXXXXXXXXLVQLTHECMMALEDWFRVEN 353
                             +  L +EC+ A+E+W RVEN
Sbjct: 524 KLHEIKADASSQLPLPLSVSWLIYECLRAIENWLRVEN 561


>ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2037

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 55/158 (34%), Positives = 77/158 (48%), Gaps = 41/158 (25%)
 Frame = +3

Query: 3   VTKYMLHDKGGILRSWMKLLSFVQGMNPLKRQKSIHIEEANTNVSLPFSLSLSIAKINSL 182
           V K++ +D+  I R+WM+LLSFVQGMNP KR+   HIE+ N +V LPF L  SIA I++L
Sbjct: 404 VPKHVTNDQQDISRTWMRLLSFVQGMNPQKRETGQHIEDENEHVHLPFILGHSIANIHTL 463

Query: 183 LVAGAFANI---------------NNFEDQDNVRHWKV---------------------- 251
           LV G+F++                N+ +D DN+RH KV                      
Sbjct: 464 LVDGSFSDASKGEMDAEIVWSSCKNDSDDGDNLRHAKVGRRSEESSACNVTSGNSALASR 523

Query: 252 ----XXXXXXXXXXXXXXLVQLTHECMMALEDWFRVEN 353
                             +  L +EC+ A+E+W RVEN
Sbjct: 524 KFREIKADDSSQLPLPRSVTLLIYECLRAIENWLRVEN 561


>ref|XP_004156647.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           UBR1-like [Cucumis sativus]
          Length = 2089

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 40/157 (25%)
 Frame = +3

Query: 3   VTKYMLHDKGGILRSWMKLLSFVQGMNPLKRQKSIHIEEANTNVSLPFSLSLSIAKINSL 182
           V +Y+++ +  ILR+W++LL+FVQGM+P KR+  +HIEE N NV LPF L  S+A I+SL
Sbjct: 421 VPRYVIYQQQDILRTWLRLLTFVQGMDPQKRETGLHIEEENENVHLPFGLDHSVANIHSL 480

Query: 183 LVAGAFANIN------------------NFEDQDNVRHWKV------------------- 251
           LV  AF+  +                  N +D D+VRH KV                   
Sbjct: 481 LVKEAFSAASSSSCEDSADAMYFQTYKQNVDDIDSVRHAKVGRLSQDSAACNVLGKSSAS 540

Query: 252 ---XXXXXXXXXXXXXXLVQLTHECMMALEDWFRVEN 353
                            ++ LT+EC+  ++ W   EN
Sbjct: 541 TSASRVDDVCSDAISSTIMWLTYECLKIIDSWLGTEN 577


>ref|XP_004137939.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           UBR1-like [Cucumis sativus]
          Length = 2099

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 40/157 (25%)
 Frame = +3

Query: 3   VTKYMLHDKGGILRSWMKLLSFVQGMNPLKRQKSIHIEEANTNVSLPFSLSLSIAKINSL 182
           V +Y+++ +  ILR+W++LL+FVQGM+P KR+  +HIEE N NV LPF L  S+A I+SL
Sbjct: 421 VPRYVIYQQQDILRTWLRLLTFVQGMDPQKRETGLHIEEENENVHLPFGLDHSVANIHSL 480

Query: 183 LVAGAFANIN------------------NFEDQDNVRHWKV------------------- 251
           LV  AF+  +                  N +D D+VRH KV                   
Sbjct: 481 LVKEAFSAASSSSCEDSADAMYFQTYKQNVDDIDSVRHAKVGRLSQDSAACNVLGKSSAS 540

Query: 252 ---XXXXXXXXXXXXXXLVQLTHECMMALEDWFRVEN 353
                            ++ LT+EC+  ++ W   EN
Sbjct: 541 TSASRVDDVCSDAISSTIMWLTYECLKIIDSWLGTEN 577


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